RNA–Protein interactions for RNA: ENST00000339298.2

SOCS4-201, Transcript of suppressor of cytokine signaling 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS4, Length 6,667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS4-201ENST00000339298 CC2D1AQ6P1N0 951 aaPredicted RBP3.87□□□□□ -1.79
SOCS4-201ENST00000339298 APBB1IPQ7Z5R6 666 aaPredicted RBP3.87□□□□□ -1.79
SOCS4-201ENST00000339298 CKAP2LQ8IYA6 745 aa3.87□□□□□ -1.79
SOCS4-201ENST00000339298 ZNF710Q8N1W2 664 aa3.87□□□□□ -1.79
SOCS4-201ENST00000339298 LTV1Q96GA3 475 aaPredicted RBP3.87□□□□□ -1.79
SOCS4-201ENST00000339298 ZMAT2Q96NC0 199 aaKnown RBP3.87□□□□□ -1.79
SOCS4-201ENST00000339298 NOL10Q9BSC4 688 aaKnown RBP3.87□□□□□ -1.79
SOCS4-201ENST00000339298 SMAPO00193 183 aa3.86□□□□□ -1.79
SOCS4-201ENST00000339298 TPM3P06753 285 aa3.86□□□□□ -1.79
SOCS4-201ENST00000339298 ACAP2Q15057 778 aa3.86□□□□□ -1.79
SOCS4-201ENST00000339298 CABLES1Q8TDN4 633 aa3.86□□□□□ -1.79
SOCS4-201ENST00000339298 HDGFL2Q7Z4V5 671 aaPredicted RBP3.86□□□□□ -1.79
SOCS4-201ENST00000339298 AASDHPPTQ9NRN7 309 aa3.86□□□□□ -1.79
SOCS4-201ENST00000339298 HDAC1Q13547 482 aaPredicted RBP3.86□□□□□ -1.79
SOCS4-201ENST00000339298 RPAINQ86UA6 219 aa3.86□□□□□ -1.79
SOCS4-201ENST00000339298 FLCNQ8NFG4 579 aa3.86□□□□□ -1.79
SOCS4-201ENST00000339298 DZIP3Q86Y13 1208 aaKnown RBP3.86□□□□□ -1.79
SOCS4-201ENST00000339298 NDUFB5O43674 189 aa3.86□□□□□ -1.79
SOCS4-201ENST00000339298 STRN4Q9NRL3 753 aa3.86□□□□□ -1.79
SOCS4-201ENST00000339298 CWC15Q9P013 229 aaKnown RBP3.86□□□□□ -1.79
SOCS4-201ENST00000339298 ATP2B4P23634 1241 aa3.85□□□□□ -1.79
SOCS4-201ENST00000339298 RAD51AP2Q09MP3 1159 aa3.85□□□□□ -1.79
SOCS4-201ENST00000339298 FERMT3Q86UX7 667 aa3.85□□□□□ -1.79
SOCS4-201ENST00000339298 CDC6Q99741 560 aa3.85□□□□□ -1.79
SOCS4-201ENST00000339298 PRDM16Q9HAZ2 1276 aa3.85□□□□□ -1.79
SOCS4-201ENST00000339298 METTL14Q9HCE5 456 aaKnown RBP3.85□□□□□ -1.79
SOCS4-201ENST00000339298 AKAP2Q9Y2D5 859 aa3.85□□□□□ -1.79
SOCS4-201ENST00000339298 GBP2P32456 591 aaPredicted RBP3.85□□□□□ -1.79
SOCS4-201ENST00000339298 MCM6Q14566 821 aa3.85□□□□□ -1.79
SOCS4-201ENST00000339298 ZNF354CQ86Y25 554 aa3.85□□□□□ -1.79
SOCS4-201ENST00000339298 GPCPD1Q9NPB8 672 aa3.85□□□□□ -1.79
SOCS4-201ENST00000339298 SUGT1Q9Y2Z0 365 aa3.85□□□□□ -1.79
SOCS4-201ENST00000339298 ANKRD45Q5TZF3 282 aa3.85□□□□□ -1.79
SOCS4-201ENST00000339298 VIMP08670 466 aaKnown RBP3.85□□□□□ -1.79
SOCS4-201ENST00000339298 EVA1CP58658 441 aa3.85□□□□□ -1.79
SOCS4-201ENST00000339298 TRIM14Q14142 442 aa3.85□□□□□ -1.79
SOCS4-201ENST00000339298 GIMAP7Q8NHV1 300 aa3.85□□□□□ -1.79
SOCS4-201ENST00000339298 TPCN2Q8NHX9 752 aa3.85□□□□□ -1.79
SOCS4-201ENST00000339298 MYCBPQ99417 103 aaPredicted RBP3.85□□□□□ -1.79
SOCS4-201ENST00000339298 RABEP2Q9H5N1 569 aa3.85□□□□□ -1.79
SOCS4-201ENST00000339298 MRGBPQ9NV56 204 aa3.85□□□□□ -1.79
SOCS4-201ENST00000339298 SERTAD1Q9UHV2 236 aa3.85□□□□□ -1.79
SOCS4-201ENST00000339298 TRIM6-TRIM34B2RNG4 842 aa3.85□□□□□ -1.79
SOCS4-201ENST00000339298 MECOMQ03112 1051 aa3.85□□□□□ -1.79
SOCS4-201ENST00000339298 PNMA8AQ86V59 439 aaPredicted RBP3.85□□□□□ -1.79
SOCS4-201ENST00000339298 ZNF454Q8N9F8 522 aa3.85□□□□□ -1.79
SOCS4-201ENST00000339298 CHAMP1Q96JM3 812 aa3.85□□□□□ -1.79
SOCS4-201ENST00000339298 FERD3LQ96RJ6 166 aa3.85□□□□□ -1.79
SOCS4-201ENST00000339298 NOVA2Q9UNW9 492 aaKnown RBP3.85□□□□□ -1.79
SOCS4-201ENST00000339298 GOLGA6L10A0A0M3HER8 536 aa3.84□□□□□ -1.79
SOCS4-201ENST00000339298 GOLGA6L10A6NI86 522 aa3.84□□□□□ -1.79
SOCS4-201ENST00000339298 XPOTO43592 962 aaKnown RBP3.84□□□□□ -1.79
SOCS4-201ENST00000339298 MYBP10242 640 aa3.84□□□□□ -1.79
SOCS4-201ENST00000339298 TAX1BP1Q86VP1 789 aa3.84□□□□□ -1.79
SOCS4-201ENST00000339298 RMI1Q9H9A7 625 aa3.84□□□□□ -1.79
SOCS4-201ENST00000339298 LMNB2Q03252 620 aa3.84□□□□□ -1.79
SOCS4-201ENST00000339298 ITKQ08881 620 aa3.84□□□□□ -1.79
SOCS4-201ENST00000339298 PPM1EQ8WY54 764 aa3.84□□□□□ -1.79
SOCS4-201ENST00000339298 KLHL42Q9P2K6 505 aa3.84□□□□□ -1.79
SOCS4-201ENST00000339298 MINK1Q8N4C8 1332 aaPredicted RBP3.84□□□□□ -1.79
SOCS4-201ENST00000339298 SPTY2D1Q68D10 685 aaPredicted RBP3.84□□□□□ -1.79
SOCS4-201ENST00000339298 CCDC91Q7Z6B0 441 aa3.84□□□□□ -1.79
SOCS4-201ENST00000339298 TRERF1Q96PN7 1200 aa3.84□□□□□ -1.79
SOCS4-201ENST00000339298 GOPCQ9HD26 462 aa3.84□□□□□ -1.79
SOCS4-201ENST00000339298 TOMM22Q9NS69 142 aa3.84□□□□□ -1.79
SOCS4-201ENST00000339298 MAGED2Q9UNF1 606 aaPredicted RBP3.84□□□□□ -1.79
SOCS4-201ENST00000339298 FECHP22830 423 aa3.84□□□□□ -1.8
SOCS4-201ENST00000339298 KCNJ4P48050 445 aa3.84□□□□□ -1.8
SOCS4-201ENST00000339298 PLPP6Q8IY26 295 aa3.84□□□□□ -1.8
SOCS4-201ENST00000339298 TRIML1Q8N9V2 468 aa3.84□□□□□ -1.8
SOCS4-201ENST00000339298 COG6Q9Y2V7 657 aa3.84□□□□□ -1.8
SOCS4-201ENST00000339298 NDUFV2P19404 249 aa3.84□□□□□ -1.8
SOCS4-201ENST00000339298 SKIV2LQ15477 1246 aaKnown RBP3.84□□□□□ -1.8
SOCS4-201ENST00000339298 ARL10Q8N8L6 244 aa3.84□□□□□ -1.8
SOCS4-201ENST00000339298 JARID2Q92833 1246 aaPredicted RBP3.84□□□□□ -1.8
SOCS4-201ENST00000339298 SEPT11Q9NVA2 429 aaKnown RBP3.84□□□□□ -1.8
SOCS4-201ENST00000339298 TSKSQ9UJT2 592 aa3.84□□□□□ -1.8
SOCS4-201ENST00000339298 FRMD3A2A2Y4 597 aa3.83□□□□□ -1.8
SOCS4-201ENST00000339298 KRT37O76014 449 aa3.83□□□□□ -1.8
SOCS4-201ENST00000339298 USP17L8P0C7I0 530 aa3.83□□□□□ -1.8
SOCS4-201ENST00000339298 NEK4P51957 841 aa3.83□□□□□ -1.8
SOCS4-201ENST00000339298 HIC1Q14526 733 aa3.83□□□□□ -1.8
SOCS4-201ENST00000339298 RBM46Q8TBY0 533 aaKnown RBP3.83□□□□□ -1.8
SOCS4-201ENST00000339298 WDR66Q8TBY9 1149 aa3.83□□□□□ -1.8
SOCS4-201ENST00000339298 ACSBG1Q96GR2 724 aa3.83□□□□□ -1.8
SOCS4-201ENST00000339298 SSU72Q9NP77 194 aaKnown RBP3.83□□□□□ -1.8
SOCS4-201ENST00000339298 PLCG2P16885 1265 aa3.83□□□□□ -1.8
SOCS4-201ENST00000339298 ZFYVE27Q5T4F4 411 aa3.83□□□□□ -1.8
SOCS4-201ENST00000339298 GET4Q7L5D6 327 aaPredicted RBP3.83□□□□□ -1.8
SOCS4-201ENST00000339298 RUFY1Q96T51 708 aa3.83□□□□□ -1.8
SOCS4-201ENST00000339298 ZMYND10O75800 440 aa3.83□□□□□ -1.8
SOCS4-201ENST00000339298 LRCH2Q5VUJ6 765 aa3.83□□□□□ -1.8
SOCS4-201ENST00000339298 TMCO3Q6UWJ1 677 aa3.83□□□□□ -1.8
SOCS4-201ENST00000339298 NT5DC4Q86YG4 428 aa3.83□□□□□ -1.8
SOCS4-201ENST00000339298 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.83□□□□□ -1.8
SOCS4-201ENST00000339298 USP25Q9UHP3 1055 aa3.83□□□□□ -1.8
SOCS4-201ENST00000339298 PALM3A6NDB9 673 aaPredicted RBP3.83□□□□□ -1.8
SOCS4-201ENST00000339298 RFC5P40937 340 aa3.83□□□□□ -1.8
SOCS4-201ENST00000339298 ATRIPQ8WXE1 791 aa3.83□□□□□ -1.8
SOCS4-201ENST00000339298 GOLGA6L9A6NEM1 432 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms