RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 MEGF6O75095 1541 aa19.07■□□□□ 0.64
NIPAL3-202ENST00000339255 OVOS2A0A0G2JMS6 1433 aa19.07■□□□□ 0.64
NIPAL3-202ENST00000339255 MEX3CQ5U5Q3 659 aaKnown RBP19.07■□□□□ 0.64
NIPAL3-202ENST00000339255 FNBP4Q8N3X1 1017 aaPredicted RBP19.07■□□□□ 0.64
NIPAL3-202ENST00000339255 TATP17735 454 aaPredicted RBP19.06■□□□□ 0.64
NIPAL3-202ENST00000339255 PLEKHO1Q53GL0 409 aaPredicted RBP19.06■□□□□ 0.64
NIPAL3-202ENST00000339255 SENP3-EIF4A1A0A087X0R7 540 aa19.05■□□□□ 0.64
NIPAL3-202ENST00000339255 UNC5CLQ8IV45 518 aa19.05■□□□□ 0.64
NIPAL3-202ENST00000339255 VIRMAQ69YN4 1812 aaKnown RBP19.05■□□□□ 0.64
NIPAL3-202ENST00000339255 BCL9LQ86UU0 1499 aa19.05■□□□□ 0.64
NIPAL3-202ENST00000339255 CALD1Q05682 793 aaKnown RBP19.05■□□□□ 0.64
NIPAL3-202ENST00000339255 MTHFSDQ2M296 383 aaKnown RBP19.05■□□□□ 0.64
NIPAL3-202ENST00000339255 WDR63Q8IWG1 891 aa19.05■□□□□ 0.64
NIPAL3-202ENST00000339255 HTATSF1O43719 755 aaKnown RBP19.04■□□□□ 0.64
NIPAL3-202ENST00000339255 GOLGA2Q08379 1002 aa19.04■□□□□ 0.64
NIPAL3-202ENST00000339255 TRIM35Q9UPQ4 493 aa19.04■□□□□ 0.64
NIPAL3-202ENST00000339255 MAP3K5Q99683 1374 aa19.04■□□□□ 0.64
NIPAL3-202ENST00000339255 IL2RBP14784 551 aa19.03■□□□□ 0.64
NIPAL3-202ENST00000339255 SPG7Q9UQ90 795 aa19.03■□□□□ 0.64
NIPAL3-202ENST00000339255 THRAP3Q9Y2W1 955 aaKnown RBP19.03■□□□□ 0.64
NIPAL3-202ENST00000339255 LRRC37A3O60309 1634 aa19.02■□□□□ 0.64
NIPAL3-202ENST00000339255 IL16Q14005 1332 aa19.02■□□□□ 0.64
NIPAL3-202ENST00000339255 SPATA31A1Q5TZJ5 1347 aa19.01■□□□□ 0.63
NIPAL3-202ENST00000339255 SPATA31A5Q5VU36 1347 aa19.01■□□□□ 0.63
NIPAL3-202ENST00000339255 SPATA31A7Q8IWB4 1347 aa19.01■□□□□ 0.63
NIPAL3-202ENST00000339255 CDCA7Q9BWT1 371 aaPredicted RBP19.01■□□□□ 0.63
NIPAL3-202ENST00000339255 DISP2A7MBM2 1401 aa19.01■□□□□ 0.63
NIPAL3-202ENST00000339255 GNAT3A8MTJ3 354 aa19.01■□□□□ 0.63
NIPAL3-202ENST00000339255 VPS72Q15906 364 aa19.01■□□□□ 0.63
NIPAL3-202ENST00000339255 RTF1Q92541 710 aaKnown RBP19.01■□□□□ 0.63
NIPAL3-202ENST00000339255 SHANK3Q9BYB0 1731 aa19.01■□□□□ 0.63
NIPAL3-202ENST00000339255 C1orf141Q5JVX7 400 aa19■□□□□ 0.63
NIPAL3-202ENST00000339255 ZNF530Q6P9A1 599 aaPredicted RBP19■□□□□ 0.63
NIPAL3-202ENST00000339255 ADAMTS7Q9UKP4 1686 aa19■□□□□ 0.63
NIPAL3-202ENST00000339255 E9PSI1 815 aa18.99■□□□□ 0.63
NIPAL3-202ENST00000339255 AKAP4Q5JQC9 854 aa18.99■□□□□ 0.63
NIPAL3-202ENST00000339255 USP35Q9P2H5 1018 aa18.99■□□□□ 0.63
NIPAL3-202ENST00000339255 USP21Q9UK80 565 aa18.99■□□□□ 0.63
NIPAL3-202ENST00000339255 SCN11AQ9UI33 1791 aa18.99■□□□□ 0.63
NIPAL3-202ENST00000339255 PCDH11XQ9BZA7 1347 aa18.99■□□□□ 0.63
NIPAL3-202ENST00000339255 PCDH11YQ9BZA8 1340 aa18.99■□□□□ 0.63
NIPAL3-202ENST00000339255 AFF2P51816 1311 aa18.98■□□□□ 0.63
NIPAL3-202ENST00000339255 BARGINQ6ZT62 677 aa18.97■□□□□ 0.63
NIPAL3-202ENST00000339255 ZCRB1Q8TBF4 217 aaKnown RBP18.96■□□□□ 0.63
NIPAL3-202ENST00000339255 MYH16Q9H6N6 1097 aa18.96■□□□□ 0.63
NIPAL3-202ENST00000339255 CCDC9Q9Y3X0 531 aaKnown RBP18.96■□□□□ 0.63
NIPAL3-202ENST00000339255 TNS2Q63HR2 1409 aa18.95■□□□□ 0.62
NIPAL3-202ENST00000339255 SLFN5Q08AF3 891 aa18.95■□□□□ 0.62
NIPAL3-202ENST00000339255 IFNL2Q8IZJ0 200 aa18.95■□□□□ 0.62
NIPAL3-202ENST00000339255 CEMIPQ8WUJ3 1361 aa18.95■□□□□ 0.62
NIPAL3-202ENST00000339255 HSP90AB1P08238 724 aaKnown RBP18.95■□□□□ 0.62
NIPAL3-202ENST00000339255 CDCA7LQ96GN5 454 aa18.95■□□□□ 0.62
NIPAL3-202ENST00000339255 ATRNO75882 1429 aa18.94■□□□□ 0.62
NIPAL3-202ENST00000339255 TRMT2AQ8IZ69 625 aaKnown RBP18.94■□□□□ 0.62
NIPAL3-202ENST00000339255 IFT57Q9NWB7 429 aa18.94■□□□□ 0.62
NIPAL3-202ENST00000339255 PHKG2P15735 406 aa18.93■□□□□ 0.62
NIPAL3-202ENST00000339255 GNAI1P63096 354 aa18.93■□□□□ 0.62
NIPAL3-202ENST00000339255 MCM10Q7L590 875 aa18.93■□□□□ 0.62
NIPAL3-202ENST00000339255 SIPA1L3O60292 1781 aaPredicted RBP18.93■□□□□ 0.62
NIPAL3-202ENST00000339255 THSD7AQ9UPZ6 1657 aa18.92■□□□□ 0.62
NIPAL3-202ENST00000339255 TRPC5Q9UL62 973 aaPredicted RBP18.92■□□□□ 0.62
NIPAL3-202ENST00000339255 DUSP27Q5VZP5 1158 aa18.92■□□□□ 0.62
NIPAL3-202ENST00000339255 CFAP44Q96MT7 982 aa18.92■□□□□ 0.62
NIPAL3-202ENST00000339255 GLI3P10071 1580 aa18.91■□□□□ 0.62
NIPAL3-202ENST00000339255 CYP27B1O15528 508 aa18.91■□□□□ 0.62
NIPAL3-202ENST00000339255 DCTN1Q14203 1278 aa18.91■□□□□ 0.62
NIPAL3-202ENST00000339255 DCAF5Q96JK2 942 aa18.91■□□□□ 0.62
NIPAL3-202ENST00000339255 THUMPD2Q9BTF0 503 aaKnown RBP18.91■□□□□ 0.62
NIPAL3-202ENST00000339255 MRC1P22897 1456 aa18.9■□□□□ 0.62
NIPAL3-202ENST00000339255 IL17REQ8NFR9 667 aa18.9■□□□□ 0.62
NIPAL3-202ENST00000339255 SPINK5Q9NQ38 1064 aaPredicted RBP18.9■□□□□ 0.62
NIPAL3-202ENST00000339255 EXOC5O00471 708 aa18.89■□□□□ 0.61
NIPAL3-202ENST00000339255 KDM6AO15550 1401 aaPredicted RBP18.89■□□□□ 0.61
NIPAL3-202ENST00000339255 ZNF853P0CG23 659 aa18.89■□□□□ 0.61
NIPAL3-202ENST00000339255 BABAM1Q9NWV8 329 aa18.89■□□□□ 0.61
NIPAL3-202ENST00000339255 RNMTO43148 476 aaKnown RBP18.89■□□□□ 0.61
NIPAL3-202ENST00000339255 NKX1-1Q15270 411 aaPredicted RBP18.89■□□□□ 0.61
NIPAL3-202ENST00000339255 ZNF772Q68DY9 489 aaPredicted RBP18.89■□□□□ 0.61
NIPAL3-202ENST00000339255 GJD4Q96KN9 370 aaPredicted RBP18.89■□□□□ 0.61
NIPAL3-202ENST00000339255 FANCIQ9NVI1 1328 aa18.88■□□□□ 0.61
NIPAL3-202ENST00000339255 KDM3BQ7LBC6 1761 aa18.88■□□□□ 0.61
NIPAL3-202ENST00000339255 TEFQ10587 303 aa18.88■□□□□ 0.61
NIPAL3-202ENST00000339255 DDB1Q16531 1140 aa18.88■□□□□ 0.61
NIPAL3-202ENST00000339255 MPRIPQ6WCQ1 1025 aa18.88■□□□□ 0.61
NIPAL3-202ENST00000339255 CHL1O00533 1208 aa18.86■□□□□ 0.61
NIPAL3-202ENST00000339255 FAM98CQ17RN3 349 aaKnown RBP18.86■□□□□ 0.61
NIPAL3-202ENST00000339255 CT47B1P0C2W7 299 aaPredicted RBP18.85■□□□□ 0.61
NIPAL3-202ENST00000339255 TAF7Q15545 349 aaPredicted RBP18.85■□□□□ 0.61
NIPAL3-202ENST00000339255 DDX54Q8TDD1 881 aaKnown RBP18.85■□□□□ 0.61
NIPAL3-202ENST00000339255 LAS1LQ9Y4W2 734 aaKnown RBP18.85■□□□□ 0.61
NIPAL3-202ENST00000339255 TOGARAM1Q9Y4F4 1720 aa18.85■□□□□ 0.61
NIPAL3-202ENST00000339255 QTRT2Q9H974 415 aaKnown RBP18.85■□□□□ 0.61
NIPAL3-202ENST00000339255 LGR6Q9HBX8 967 aa18.85■□□□□ 0.61
NIPAL3-202ENST00000339255 MBIPQ9NS73 344 aa18.85■□□□□ 0.61
NIPAL3-202ENST00000339255 KAT6BQ8WYB5 2073 aa18.84■□□□□ 0.61
NIPAL3-202ENST00000339255 TSR2Q969E8 191 aaKnown RBP18.84■□□□□ 0.61
NIPAL3-202ENST00000339255 ITGB4P16144 1822 aa18.84■□□□□ 0.61
NIPAL3-202ENST00000339255 ERVV-2B6SEH9 535 aa18.83■□□□□ 0.61
NIPAL3-202ENST00000339255 SLC52A2Q9HAB3 445 aa18.83■□□□□ 0.61
NIPAL3-202ENST00000339255 ONECUT3O60422 494 aaPredicted RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms