RNA–Protein interactions for RNA: ENST00000338932.7

SPTBN4-201, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SPTBN4, Length 8,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-201ENST00000338932 TUBBP07437 444 aa23.34■■□□□ 1.33
SPTBN4-201ENST00000338932 BRPF1P55201 1214 aaPredicted RBP23.34■■□□□ 1.33
SPTBN4-201ENST00000338932 ANKS4BQ8N8V4 417 aa23.34■■□□□ 1.33
SPTBN4-201ENST00000338932 ALS2CR12Q96Q35 445 aa23.34■■□□□ 1.33
SPTBN4-201ENST00000338932 USO1O60763 962 aaKnown RBP23.34■■□□□ 1.33
SPTBN4-201ENST00000338932 CCDC196A0A1B0GTZ2 297 aa23.34■■□□□ 1.33
SPTBN4-201ENST00000338932 ARHGAP5Q13017 1502 aa23.34■■□□□ 1.33
SPTBN4-201ENST00000338932 MCM4P33991 863 aa23.33■■□□□ 1.33
SPTBN4-201ENST00000338932 RAB34Q9BZG1 259 aa23.33■■□□□ 1.33
SPTBN4-201ENST00000338932 FKBP15Q5T1M5 1219 aa23.33■■□□□ 1.33
SPTBN4-201ENST00000338932 CCDC141Q6ZP82 1450 aa23.33■■□□□ 1.33
SPTBN4-201ENST00000338932 EIF2S2P20042 333 aaKnown RBP23.33■■□□□ 1.33
SPTBN4-201ENST00000338932 FMNL2Q96PY5 1086 aa23.33■■□□□ 1.33
SPTBN4-201ENST00000338932 STMN4Q9H169 189 aaPredicted RBP23.33■■□□□ 1.32
SPTBN4-201ENST00000338932 PAF1Q8N7H5 531 aa23.32■■□□□ 1.32
SPTBN4-201ENST00000338932 CASKIN1Q8WXD9 1431 aa23.32■■□□□ 1.32
SPTBN4-201ENST00000338932 LTV1Q96GA3 475 aaPredicted RBP23.32■■□□□ 1.32
SPTBN4-201ENST00000338932 TMEM132AQ24JP5 1023 aa23.32■■□□□ 1.32
SPTBN4-201ENST00000338932 IFI16Q16666 785 aaKnown RBP23.31■■□□□ 1.32
SPTBN4-201ENST00000338932 PAFAH1B1P43034 410 aa23.31■■□□□ 1.32
SPTBN4-201ENST00000338932 PLVAPQ9BX97 442 aa23.31■■□□□ 1.32
SPTBN4-201ENST00000338932 CCDC27Q2M243 656 aa23.3■■□□□ 1.32
SPTBN4-201ENST00000338932 BLOC1S2Q6QNY1 142 aa23.3■■□□□ 1.32
SPTBN4-201ENST00000338932 FERMT1Q9BQL6 677 aa23.3■■□□□ 1.32
SPTBN4-201ENST00000338932 RAPGEF4Q8WZA2 1011 aa23.3■■□□□ 1.32
SPTBN4-201ENST00000338932 NEUROD6Q96NK8 337 aa23.3■■□□□ 1.32
SPTBN4-201ENST00000338932 NKTRP30414 1462 aaKnown RBP23.3■■□□□ 1.32
SPTBN4-201ENST00000338932 EIF5P55010 431 aaKnown RBP23.29■■□□□ 1.32
SPTBN4-201ENST00000338932 IFFO1Q0D2I5 559 aa23.29■■□□□ 1.32
SPTBN4-201ENST00000338932 NSRP1Q9H0G5 558 aaKnown RBP23.29■■□□□ 1.32
SPTBN4-201ENST00000338932 A6NNZ2 444 aa23.28■■□□□ 1.32
SPTBN4-201ENST00000338932 TUBB8Q3ZCM7 444 aa23.28■■□□□ 1.32
SPTBN4-201ENST00000338932 CCDC150Q8NCX0 1101 aa23.28■■□□□ 1.32
SPTBN4-201ENST00000338932 U3KPZ7 1027 aaPredicted RBP23.28■■□□□ 1.32
SPTBN4-201ENST00000338932 TIAM1Q13009 1591 aa23.28■■□□□ 1.32
SPTBN4-201ENST00000338932 PSME1Q06323 249 aa23.28■■□□□ 1.32
SPTBN4-201ENST00000338932 TSG101Q99816 390 aa23.28■■□□□ 1.32
SPTBN4-201ENST00000338932 HNRNPMP52272 730 aaKnown RBP eCLIP23.28■■□□□ 1.32
SPTBN4-201ENST00000338932 CCDC171Q6TFL3 1326 aa23.28■■□□□ 1.32
SPTBN4-201ENST00000338932 GOLIM4O00461 696 aa23.28■■□□□ 1.32
SPTBN4-201ENST00000338932 ANAPC15P60006 121 aa23.27■■□□□ 1.32
SPTBN4-201ENST00000338932 TANGO6Q9C0B7 1094 aa23.27■■□□□ 1.32
SPTBN4-201ENST00000338932 IKQ13123 557 aaPredicted RBP23.27■■□□□ 1.32
SPTBN4-201ENST00000338932 CFAP100Q494V2 611 aa23.27■■□□□ 1.32
SPTBN4-201ENST00000338932 KANK3Q6NY19 840 aa23.27■■□□□ 1.32
SPTBN4-201ENST00000338932 SOGA3Q5TF21 947 aa23.27■■□□□ 1.32
SPTBN4-201ENST00000338932 FAM114A1Q8IWE2 563 aa23.27■■□□□ 1.32
SPTBN4-201ENST00000338932 BMS1Q14692 1282 aaKnown RBP23.26■■□□□ 1.31
SPTBN4-201ENST00000338932 SRRTQ9BXP5 876 aaKnown RBP23.26■■□□□ 1.31
SPTBN4-201ENST00000338932 RAB11FIP3O75154 756 aa23.26■■□□□ 1.31
SPTBN4-201ENST00000338932 RBM10P98175 930 aaKnown RBP23.26■■□□□ 1.31
SPTBN4-201ENST00000338932 BRPF3Q9ULD4 1205 aa23.25■■□□□ 1.31
SPTBN4-201ENST00000338932 DDX46Q7L014 1031 aaKnown RBP23.25■■□□□ 1.31
SPTBN4-201ENST00000338932 CKAP4Q07065 602 aaKnown RBP23.25■■□□□ 1.31
SPTBN4-201ENST00000338932 UVSSAQ2YD98 709 aa23.25■■□□□ 1.31
SPTBN4-201ENST00000338932 NBPF1Q3BBV0 1214 aa23.25■■□□□ 1.31
SPTBN4-201ENST00000338932 FBXO3Q9UK99 471 aa23.25■■□□□ 1.31
SPTBN4-201ENST00000338932 ELL2O00472 640 aaPredicted RBP23.25■■□□□ 1.31
SPTBN4-201ENST00000338932 CETN1Q12798 172 aa23.25■■□□□ 1.31
SPTBN4-201ENST00000338932 SEPT11Q9NVA2 429 aaKnown RBP23.25■■□□□ 1.31
SPTBN4-201ENST00000338932 CCDC172P0C7W6 258 aa23.25■■□□□ 1.31
SPTBN4-201ENST00000338932 PANK1Q8TE04 598 aa23.25■■□□□ 1.31
SPTBN4-201ENST00000338932 HSPA4P34932 840 aa23.24■■□□□ 1.31
SPTBN4-201ENST00000338932 ANKRD50Q9ULJ7 1429 aa23.24■■□□□ 1.31
SPTBN4-201ENST00000338932 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.24■■□□□ 1.31
SPTBN4-201ENST00000338932 TNIP1Q15025 636 aa23.24■■□□□ 1.31
SPTBN4-201ENST00000338932 EIF2AK4Q9P2K8 1649 aaKnown RBP23.24■■□□□ 1.31
SPTBN4-201ENST00000338932 SURF6O75683 361 aaKnown RBP23.24■■□□□ 1.31
SPTBN4-201ENST00000338932 MVPQ14764 893 aaKnown RBP23.23■■□□□ 1.31
SPTBN4-201ENST00000338932 CHD1LQ86WJ1 897 aa23.23■■□□□ 1.31
SPTBN4-201ENST00000338932 ERICH4A6NGS2 130 aa23.23■■□□□ 1.31
SPTBN4-201ENST00000338932 TTC39AQ5SRH9 613 aa23.23■■□□□ 1.31
SPTBN4-201ENST00000338932 KIF21AQ7Z4S6 1674 aa23.22■■□□□ 1.31
SPTBN4-201ENST00000338932 FAM193AP78312 1265 aa23.22■■□□□ 1.31
SPTBN4-201ENST00000338932 CEP112Q8N8E3 955 aa23.22■■□□□ 1.31
SPTBN4-201ENST00000338932 GPRASP1Q5JY77 1395 aa23.22■■□□□ 1.31
SPTBN4-201ENST00000338932 GTPBP4Q9BZE4 634 aaKnown RBP23.22■■□□□ 1.31
SPTBN4-201ENST00000338932 FAM135AQ9P2D6 1515 aa23.22■■□□□ 1.31
SPTBN4-201ENST00000338932 TTC14Q96N46 770 aa23.22■■□□□ 1.31
SPTBN4-201ENST00000338932 HS1BP3Q53T59 392 aa23.21■■□□□ 1.31
SPTBN4-201ENST00000338932 GAPVD1Q14C86 1478 aa23.21■■□□□ 1.31
SPTBN4-201ENST00000338932 TOP1P11387 765 aaKnown RBP23.21■■□□□ 1.31
SPTBN4-201ENST00000338932 SKIDA1Q1XH10 827 aa23.21■■□□□ 1.31
SPTBN4-201ENST00000338932 ATF7IPQ6VMQ6 1270 aa23.21■■□□□ 1.31
SPTBN4-201ENST00000338932 STX1AQ16623 288 aa23.21■■□□□ 1.31
SPTBN4-201ENST00000338932 SMARCC1Q92922 1105 aaPredicted RBP23.21■■□□□ 1.31
SPTBN4-201ENST00000338932 DAAM2Q86T65 1068 aa23.21■■□□□ 1.31
SPTBN4-201ENST00000338932 FMNL3Q8IVF7 1028 aa23.21■■□□□ 1.31
SPTBN4-201ENST00000338932 DDX19AQ9NUU7 478 aaKnown RBP23.21■■□□□ 1.31
SPTBN4-201ENST00000338932 GRIPAP1Q4V328 841 aa23.21■■□□□ 1.31
SPTBN4-201ENST00000338932 KRT222Q8N1A0 295 aa23.21■■□□□ 1.31
SPTBN4-201ENST00000338932 TTC12Q9H892 705 aaPredicted RBP23.21■■□□□ 1.31
SPTBN4-201ENST00000338932 ABCC11Q96J66 1382 aa23.2■■□□□ 1.3
SPTBN4-201ENST00000338932 YEATS4O95619 227 aa23.2■■□□□ 1.3
SPTBN4-201ENST00000338932 PRPHP41219 470 aa23.2■■□□□ 1.3
SPTBN4-201ENST00000338932 FSD2A1L4K1 749 aa23.2■■□□□ 1.3
SPTBN4-201ENST00000338932 SETSIPP0DME0 302 aa23.2■■□□□ 1.3
SPTBN4-201ENST00000338932 NEBLO76041 1014 aa23.19■■□□□ 1.3
SPTBN4-201ENST00000338932 ATAD2Q6PL18 1390 aa23.19■■□□□ 1.3
SPTBN4-201ENST00000338932 SH3BGRP55822 239 aaPredicted RBP23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms