RNA–Protein interactions for RNA: ENST00000338469.3

TREM2-201, Transcript of triggering receptor expressed on myeloid cells 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TREM2, Length 860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2-201ENST00000338469 KCNQ4P56696 695 aa16.05■□□□□ 0.16
TREM2-201ENST00000338469 ZNF827Q17R98 1081 aa16.05■□□□□ 0.16
TREM2-201ENST00000338469 KIF20BQ96Q89 1820 aa16.05■□□□□ 0.16
TREM2-201ENST00000338469 NSD2O96028 1365 aa16.04■□□□□ 0.16
TREM2-201ENST00000338469 PRIM1P49642 420 aaKnown RBP16.04■□□□□ 0.16
TREM2-201ENST00000338469 ATF5Q9Y2D1 282 aaPredicted RBP16.04■□□□□ 0.16
TREM2-201ENST00000338469 PAPPAQ13219 1627 aa16.04■□□□□ 0.16
TREM2-201ENST00000338469 RTL1A6NKG5 1358 aa16.03■□□□□ 0.16
TREM2-201ENST00000338469 CDCA8Q53HL2 280 aa16.03■□□□□ 0.16
TREM2-201ENST00000338469 ZCRB1Q8TBF4 217 aaKnown RBP16.03■□□□□ 0.16
TREM2-201ENST00000338469 INSRP06213 1382 aa16.02■□□□□ 0.16
TREM2-201ENST00000338469 STK32BQ9NY57 414 aa16.02■□□□□ 0.16
TREM2-201ENST00000338469 SGIP1Q9BQI5 828 aa16.01■□□□□ 0.15
TREM2-201ENST00000338469 POLR3GLQ9BT43 218 aa16■□□□□ 0.15
TREM2-201ENST00000338469 PPP1R1BQ9UD71 204 aaPredicted RBP16■□□□□ 0.15
TREM2-201ENST00000338469 DOT1LQ8TEK3 1739 aa15.99■□□□□ 0.15
TREM2-201ENST00000338469 AKT1S1Q96B36 256 aa15.99■□□□□ 0.15
TREM2-201ENST00000338469 SYTL4Q96C24 671 aaPredicted RBP15.99■□□□□ 0.15
TREM2-201ENST00000338469 FLT4P35916 1363 aa15.99■□□□□ 0.15
TREM2-201ENST00000338469 CYP27B1O15528 508 aa15.98■□□□□ 0.15
TREM2-201ENST00000338469 POLKQ9UBT6 870 aa15.98■□□□□ 0.15
TREM2-201ENST00000338469 PPM1GO15355 546 aaPredicted RBP15.96■□□□□ 0.15
TREM2-201ENST00000338469 MAP2P11137 1827 aaKnown RBP15.96■□□□□ 0.14
TREM2-201ENST00000338469 NCAPD2Q15021 1401 aa15.95■□□□□ 0.14
TREM2-201ENST00000338469 TATP17735 454 aaPredicted RBP15.95■□□□□ 0.14
TREM2-201ENST00000338469 RAPGEF4Q8WZA2 1011 aa15.95■□□□□ 0.14
TREM2-201ENST00000338469 EYA1Q99502 592 aa15.95■□□□□ 0.14
TREM2-201ENST00000338469 PANK3Q9H999 370 aa15.95■□□□□ 0.14
TREM2-201ENST00000338469 KIF24Q5T7B8 1368 aa15.95■□□□□ 0.14
TREM2-201ENST00000338469 WASHC2AQ641Q2 1341 aa15.94■□□□□ 0.14
TREM2-201ENST00000338469 LY75O60449 1722 aa15.94■□□□□ 0.14
TREM2-201ENST00000338469 ANKRD26Q9UPS8 1709 aa15.94■□□□□ 0.14
TREM2-201ENST00000338469 TNNT2P45379 298 aaPredicted RBP15.94■□□□□ 0.14
TREM2-201ENST00000338469 MTFR1LQ9H019 292 aa15.94■□□□□ 0.14
TREM2-201ENST00000338469 TUBGCP6Q96RT7 1819 aa15.94■□□□□ 0.14
TREM2-201ENST00000338469 CGNL1Q0VF96 1302 aa15.94■□□□□ 0.14
TREM2-201ENST00000338469 PNPLA7Q6ZV29 1317 aa15.94■□□□□ 0.14
TREM2-201ENST00000338469 SLC27A3Q5K4L6 730 aa15.93■□□□□ 0.14
TREM2-201ENST00000338469 UTRNP46939 3433 aa15.93■□□□□ 0.14
TREM2-201ENST00000338469 SMG6Q86US8 1419 aaKnown RBP15.93■□□□□ 0.14
TREM2-201ENST00000338469 TOGARAM1Q9Y4F4 1720 aa15.92■□□□□ 0.14
TREM2-201ENST00000338469 ZNF316A6NFI3 1004 aaPredicted RBP15.92■□□□□ 0.14
TREM2-201ENST00000338469 SYT17Q9BSW7 474 aa15.92■□□□□ 0.14
TREM2-201ENST00000338469 FHDC1Q9C0D6 1143 aaPredicted RBP15.92■□□□□ 0.14
TREM2-201ENST00000338469 EIF4A2Q14240 407 aaKnown RBP15.91■□□□□ 0.14
TREM2-201ENST00000338469 DCAF8L1A6NGE4 600 aa15.9■□□□□ 0.14
TREM2-201ENST00000338469 CCNL1Q9UK58 526 aaPredicted RBP15.9■□□□□ 0.14
TREM2-201ENST00000338469 KIF7Q2M1P5 1343 aa15.9■□□□□ 0.14
TREM2-201ENST00000338469 PCDH11XQ9BZA7 1347 aa15.9■□□□□ 0.14
TREM2-201ENST00000338469 PCDH11YQ9BZA8 1340 aa15.9■□□□□ 0.14
TREM2-201ENST00000338469 PKD1L3Q7Z443 1732 aa15.89■□□□□ 0.13
TREM2-201ENST00000338469 MPRIPQ6WCQ1 1025 aa15.89■□□□□ 0.13
TREM2-201ENST00000338469 SMIM5Q71RC9 77 aa15.89■□□□□ 0.13
TREM2-201ENST00000338469 AMIGO3Q86WK7 504 aa15.89■□□□□ 0.13
TREM2-201ENST00000338469 NKX1-1Q15270 411 aaPredicted RBP15.88■□□□□ 0.13
TREM2-201ENST00000338469 ZNF784Q8NCA9 323 aaPredicted RBP15.88■□□□□ 0.13
TREM2-201ENST00000338469 PIGBQ92521 554 aa15.88■□□□□ 0.13
TREM2-201ENST00000338469 ARXQ96QS3 562 aa15.88■□□□□ 0.13
TREM2-201ENST00000338469 ITGB4P16144 1822 aa15.88■□□□□ 0.13
TREM2-201ENST00000338469 QSER1Q2KHR3 1735 aa15.88■□□□□ 0.13
TREM2-201ENST00000338469 COL23A1Q86Y22 540 aaPredicted RBP15.87■□□□□ 0.13
TREM2-201ENST00000338469 TFCP2L1Q9NZI6 479 aa15.87■□□□□ 0.13
TREM2-201ENST00000338469 COL24A1Q17RW2 1714 aa15.87■□□□□ 0.13
TREM2-201ENST00000338469 PALLDQ8WX93 1383 aa15.85■□□□□ 0.13
TREM2-201ENST00000338469 PHKG2P15735 406 aa15.84■□□□□ 0.13
TREM2-201ENST00000338469 SLC16A10Q8TF71 515 aa15.84■□□□□ 0.13
TREM2-201ENST00000338469 TAF1LQ8IZX4 1826 aa15.83■□□□□ 0.12
TREM2-201ENST00000338469 AMER1Q5JTC6 1135 aaPredicted RBP15.83■□□□□ 0.12
TREM2-201ENST00000338469 AEBP1Q8IUX7 1158 aa15.83■□□□□ 0.12
TREM2-201ENST00000338469 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.83■□□□□ 0.12
TREM2-201ENST00000338469 ASAP1Q9ULH1 1129 aa15.83■□□□□ 0.12
TREM2-201ENST00000338469 SPG7Q9UQ90 795 aa15.83■□□□□ 0.12
TREM2-201ENST00000338469 IGSF1Q8N6C5 1336 aa15.83■□□□□ 0.12
TREM2-201ENST00000338469 C5P01031 1676 aa15.82■□□□□ 0.12
TREM2-201ENST00000338469 MSL1Q68DK7 614 aa15.81■□□□□ 0.12
TREM2-201ENST00000338469 MORC1Q86VD1 984 aa15.81■□□□□ 0.12
TREM2-201ENST00000338469 NLGN2Q8NFZ4 835 aa15.81■□□□□ 0.12
TREM2-201ENST00000338469 GOLGB1Q14789 3259 aaKnown RBP15.8■□□□□ 0.12
TREM2-201ENST00000338469 MAP3K5Q99683 1374 aa15.8■□□□□ 0.12
TREM2-201ENST00000338469 PER1O15534 1290 aaPredicted RBP15.8■□□□□ 0.12
TREM2-201ENST00000338469 ITPK1Q13572 414 aa15.8■□□□□ 0.12
TREM2-201ENST00000338469 IFNL2Q8IZJ0 200 aa15.8■□□□□ 0.12
TREM2-201ENST00000338469 LINC00116Q8NCU8 138 aa15.8■□□□□ 0.12
TREM2-201ENST00000338469 SLC4A9Q96Q91 983 aa15.8■□□□□ 0.12
TREM2-201ENST00000338469 MSH5O43196 834 aa15.79■□□□□ 0.12
TREM2-201ENST00000338469 ATG3Q9NT62 314 aa15.79■□□□□ 0.12
TREM2-201ENST00000338469 C4BP0C0L5 1744 aa15.78■□□□□ 0.12
TREM2-201ENST00000338469 IL13P35225 146 aa15.78■□□□□ 0.12
TREM2-201ENST00000338469 KLHL34Q8N239 644 aa15.78■□□□□ 0.12
TREM2-201ENST00000338469 LOC102724428A0A0B4J2F2 783 aa15.77■□□□□ 0.12
TREM2-201ENST00000338469 SIK1P57059 783 aa15.77■□□□□ 0.12
TREM2-201ENST00000338469 SMARCC1Q92922 1105 aaPredicted RBP15.77■□□□□ 0.12
TREM2-201ENST00000338469 TMOD3Q9NYL9 352 aa15.77■□□□□ 0.12
TREM2-201ENST00000338469 KNSTRNQ9Y448 316 aa15.77■□□□□ 0.12
TREM2-201ENST00000338469 KDM6AO15550 1401 aaPredicted RBP15.77■□□□□ 0.11
TREM2-201ENST00000338469 SENP3-EIF4A1A0A087X0R7 540 aa15.76■□□□□ 0.11
TREM2-201ENST00000338469 POLD1P28340 1107 aa15.76■□□□□ 0.11
TREM2-201ENST00000338469 UBR3Q6ZT12 1888 aa15.76■□□□□ 0.11
TREM2-201ENST00000338469 C1QTNF8P60827 252 aa15.75■□□□□ 0.11
TREM2-201ENST00000338469 DDX10Q13206 875 aaKnown RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms