RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 MYOM1P52179 1685 aa18.51■□□□□ 0.55
NUDCD3-201ENST00000338427 FAM208AQ9UK61 1670 aaKnown RBP18.51■□□□□ 0.55
NUDCD3-201ENST00000338427 ZNF827Q17R98 1081 aa18.51■□□□□ 0.55
NUDCD3-201ENST00000338427 PANK3Q9H999 370 aa18.51■□□□□ 0.55
NUDCD3-201ENST00000338427 INSRP06213 1382 aa18.51■□□□□ 0.55
NUDCD3-201ENST00000338427 NHSQ6T4R5 1651 aa18.5■□□□□ 0.55
NUDCD3-201ENST00000338427 TATP17735 454 aaPredicted RBP18.5■□□□□ 0.55
NUDCD3-201ENST00000338427 RAPGEF4Q8WZA2 1011 aa18.5■□□□□ 0.55
NUDCD3-201ENST00000338427 POLKQ9UBT6 870 aa18.5■□□□□ 0.55
NUDCD3-201ENST00000338427 BTAF1O14981 1849 aa18.5■□□□□ 0.55
NUDCD3-201ENST00000338427 RTL1A6NKG5 1358 aa18.5■□□□□ 0.55
NUDCD3-201ENST00000338427 RGPD3A6NKT7 1758 aaPredicted RBP18.5■□□□□ 0.55
NUDCD3-201ENST00000338427 RGPD4Q7Z3J3 1758 aa18.5■□□□□ 0.55
NUDCD3-201ENST00000338427 PTGER2P43116 358 aa18.49■□□□□ 0.55
NUDCD3-201ENST00000338427 KIF20BQ96Q89 1820 aa18.49■□□□□ 0.55
NUDCD3-201ENST00000338427 FLT4P35916 1363 aa18.48■□□□□ 0.55
NUDCD3-201ENST00000338427 EYA1Q99502 592 aa18.47■□□□□ 0.55
NUDCD3-201ENST00000338427 CGNL1Q0VF96 1302 aa18.47■□□□□ 0.55
NUDCD3-201ENST00000338427 CASZ1Q86V15 1759 aa18.46■□□□□ 0.55
NUDCD3-201ENST00000338427 CYP27B1O15528 508 aa18.46■□□□□ 0.55
NUDCD3-201ENST00000338427 AKT1S1Q96B36 256 aa18.46■□□□□ 0.55
NUDCD3-201ENST00000338427 WASHC2AQ641Q2 1341 aa18.46■□□□□ 0.55
NUDCD3-201ENST00000338427 NSD2O96028 1365 aa18.45■□□□□ 0.54
NUDCD3-201ENST00000338427 SHANK3Q9BYB0 1731 aa18.44■□□□□ 0.54
NUDCD3-201ENST00000338427 SMG6Q86US8 1419 aaKnown RBP18.43■□□□□ 0.54
NUDCD3-201ENST00000338427 MAP2P11137 1827 aaKnown RBP18.43■□□□□ 0.54
NUDCD3-201ENST00000338427 EIF4A2Q14240 407 aaKnown RBP18.42■□□□□ 0.54
NUDCD3-201ENST00000338427 SLC27A3Q5K4L6 730 aa18.42■□□□□ 0.54
NUDCD3-201ENST00000338427 MPRIPQ6WCQ1 1025 aa18.42■□□□□ 0.54
NUDCD3-201ENST00000338427 SGIP1Q9BQI5 828 aa18.42■□□□□ 0.54
NUDCD3-201ENST00000338427 MTFR1LQ9H019 292 aa18.42■□□□□ 0.54
NUDCD3-201ENST00000338427 CCNL1Q9UK58 526 aaPredicted RBP18.41■□□□□ 0.54
NUDCD3-201ENST00000338427 KIF24Q5T7B8 1368 aa18.41■□□□□ 0.54
NUDCD3-201ENST00000338427 FHDC1Q9C0D6 1143 aaPredicted RBP18.4■□□□□ 0.54
NUDCD3-201ENST00000338427 DOT1LQ8TEK3 1739 aa18.4■□□□□ 0.54
NUDCD3-201ENST00000338427 TFCP2L1Q9NZI6 479 aa18.39■□□□□ 0.53
NUDCD3-201ENST00000338427 PNPLA7Q6ZV29 1317 aa18.39■□□□□ 0.53
NUDCD3-201ENST00000338427 PAPPAQ13219 1627 aa18.38■□□□□ 0.53
NUDCD3-201ENST00000338427 SMIM5Q71RC9 77 aa18.38■□□□□ 0.53
NUDCD3-201ENST00000338427 PIGBQ92521 554 aa18.38■□□□□ 0.53
NUDCD3-201ENST00000338427 SYT17Q9BSW7 474 aa18.38■□□□□ 0.53
NUDCD3-201ENST00000338427 PCDH11XQ9BZA7 1347 aa18.38■□□□□ 0.53
NUDCD3-201ENST00000338427 PCDH11YQ9BZA8 1340 aa18.38■□□□□ 0.53
NUDCD3-201ENST00000338427 MORC1Q86VD1 984 aa18.37■□□□□ 0.53
NUDCD3-201ENST00000338427 ARXQ96QS3 562 aa18.36■□□□□ 0.53
NUDCD3-201ENST00000338427 NKX1-1Q15270 411 aaPredicted RBP18.35■□□□□ 0.53
NUDCD3-201ENST00000338427 COL23A1Q86Y22 540 aaPredicted RBP18.35■□□□□ 0.53
NUDCD3-201ENST00000338427 SPG7Q9UQ90 795 aa18.35■□□□□ 0.53
NUDCD3-201ENST00000338427 MSH5O43196 834 aa18.34■□□□□ 0.53
NUDCD3-201ENST00000338427 NCAPD2Q15021 1401 aa18.33■□□□□ 0.53
NUDCD3-201ENST00000338427 KIF7Q2M1P5 1343 aa18.33■□□□□ 0.53
NUDCD3-201ENST00000338427 KNSTRNQ9Y448 316 aa18.33■□□□□ 0.52
NUDCD3-201ENST00000338427 PHKG2P15735 406 aa18.32■□□□□ 0.52
NUDCD3-201ENST00000338427 YY1P25490 414 aa18.32■□□□□ 0.52
NUDCD3-201ENST00000338427 CNGB1Q14028 1251 aaPredicted RBP18.32■□□□□ 0.52
NUDCD3-201ENST00000338427 AEBP1Q8IUX7 1158 aa18.32■□□□□ 0.52
NUDCD3-201ENST00000338427 KLHL34Q8N239 644 aa18.32■□□□□ 0.52
NUDCD3-201ENST00000338427 LY75O60449 1722 aa18.32■□□□□ 0.52
NUDCD3-201ENST00000338427 PALLDQ8WX93 1383 aa18.31■□□□□ 0.52
NUDCD3-201ENST00000338427 MSL1Q68DK7 614 aa18.31■□□□□ 0.52
NUDCD3-201ENST00000338427 AMIGO3Q86WK7 504 aa18.31■□□□□ 0.52
NUDCD3-201ENST00000338427 IFNL2Q8IZJ0 200 aa18.31■□□□□ 0.52
NUDCD3-201ENST00000338427 ASAP1Q9ULH1 1129 aa18.31■□□□□ 0.52
NUDCD3-201ENST00000338427 DCAF8L1A6NGE4 600 aa18.3■□□□□ 0.52
NUDCD3-201ENST00000338427 AMER1Q5JTC6 1135 aaPredicted RBP18.3■□□□□ 0.52
NUDCD3-201ENST00000338427 SLC16A10Q8TF71 515 aa18.3■□□□□ 0.52
NUDCD3-201ENST00000338427 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.3■□□□□ 0.52
NUDCD3-201ENST00000338427 ANKRD26Q9UPS8 1709 aa18.29■□□□□ 0.52
NUDCD3-201ENST00000338427 TOGARAM1Q9Y4F4 1720 aa18.29■□□□□ 0.52
NUDCD3-201ENST00000338427 ITGB4P16144 1822 aa18.28■□□□□ 0.52
NUDCD3-201ENST00000338427 TUBGCP6Q96RT7 1819 aa18.28■□□□□ 0.52
NUDCD3-201ENST00000338427 IGSF1Q8N6C5 1336 aa18.28■□□□□ 0.52
NUDCD3-201ENST00000338427 PER1O15534 1290 aaPredicted RBP18.28■□□□□ 0.52
NUDCD3-201ENST00000338427 CC2D1BQ5T0F9 858 aaKnown RBP18.27■□□□□ 0.52
NUDCD3-201ENST00000338427 SMARCC1Q92922 1105 aaPredicted RBP18.27■□□□□ 0.52
NUDCD3-201ENST00000338427 ATG3Q9NT62 314 aa18.27■□□□□ 0.52
NUDCD3-201ENST00000338427 TMOD3Q9NYL9 352 aa18.27■□□□□ 0.52
NUDCD3-201ENST00000338427 PKD1L3Q7Z443 1732 aa18.26■□□□□ 0.51
NUDCD3-201ENST00000338427 POLD1P28340 1107 aa18.26■□□□□ 0.51
NUDCD3-201ENST00000338427 IL13P35225 146 aa18.26■□□□□ 0.51
NUDCD3-201ENST00000338427 ITPK1Q13572 414 aa18.26■□□□□ 0.51
NUDCD3-201ENST00000338427 SULT6B1Q6IMI4 303 aa18.26■□□□□ 0.51
NUDCD3-201ENST00000338427 LINC00116Q8NCU8 138 aa18.26■□□□□ 0.51
NUDCD3-201ENST00000338427 LOC102724428A0A0B4J2F2 783 aa18.25■□□□□ 0.51
NUDCD3-201ENST00000338427 SIK1P57059 783 aa18.25■□□□□ 0.51
NUDCD3-201ENST00000338427 PLEKHO1Q53GL0 409 aaPredicted RBP18.25■□□□□ 0.51
NUDCD3-201ENST00000338427 NLGN2Q8NFZ4 835 aa18.25■□□□□ 0.51
NUDCD3-201ENST00000338427 PHF14O94880 888 aa18.24■□□□□ 0.51
NUDCD3-201ENST00000338427 MTHFSP49914 203 aa18.24■□□□□ 0.51
NUDCD3-201ENST00000338427 ZNF530Q6P9A1 599 aaPredicted RBP18.24■□□□□ 0.51
NUDCD3-201ENST00000338427 SLC4A9Q96Q91 983 aa18.24■□□□□ 0.51
NUDCD3-201ENST00000338427 ATP6V1AP38606 617 aa18.23■□□□□ 0.51
NUDCD3-201ENST00000338427 PELP1Q8IZL8 1130 aaKnown RBP18.22■□□□□ 0.51
NUDCD3-201ENST00000338427 AK7Q96M32 723 aa18.22■□□□□ 0.51
NUDCD3-201ENST00000338427 QSER1Q2KHR3 1735 aa18.21■□□□□ 0.51
NUDCD3-201ENST00000338427 GPR162Q16538 588 aa18.21■□□□□ 0.51
NUDCD3-201ENST00000338427 RBM42Q9BTD8 480 aaKnown RBP18.21■□□□□ 0.51
NUDCD3-201ENST00000338427 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.2■□□□□ 0.5
NUDCD3-201ENST00000338427 HMOX1P09601 288 aa18.2■□□□□ 0.5
NUDCD3-201ENST00000338427 TAF1LQ8IZX4 1826 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms