RNA–Protein interactions for RNA: ENST00000337304.2

ATF4-201, Transcript of activating transcription factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATF4, Length 2,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4-201ENST00000337304 ROBO1Q9Y6N7 1651 aa33.57■■■□□ 2.97
ATF4-201ENST00000337304 HTATSF1O43719 755 aaKnown RBP33.57■■■□□ 2.96
ATF4-201ENST00000337304 CCDC136Q96JN2 1154 aa33.55■■■□□ 2.96
ATF4-201ENST00000337304 LRRC37A3O60309 1634 aa33.55■■■□□ 2.96
ATF4-201ENST00000337304 GNAT3A8MTJ3 354 aa33.55■■■□□ 2.96
ATF4-201ENST00000337304 CHRNA2Q15822 529 aa33.54■■■□□ 2.96
ATF4-201ENST00000337304 MAP3K5Q99683 1374 aa33.54■■■□□ 2.96
ATF4-201ENST00000337304 FRAT1Q92837 279 aaPredicted RBP33.53■■■□□ 2.96
ATF4-201ENST00000337304 CHL1O00533 1208 aa33.53■■■□□ 2.96
ATF4-201ENST00000337304 CANXP27824 592 aaKnown RBP33.53■■■□□ 2.96
ATF4-201ENST00000337304 PDE3AQ14432 1141 aa33.52■■■□□ 2.96
ATF4-201ENST00000337304 SSH1Q8WYL5 1049 aa33.52■■■□□ 2.96
ATF4-201ENST00000337304 FAM208AQ9UK61 1670 aaKnown RBP33.52■■■□□ 2.96
ATF4-201ENST00000337304 SMC4Q9NTJ3 1288 aa33.5■■■□□ 2.95
ATF4-201ENST00000337304 TSPYL6Q8N831 410 aa33.5■■■□□ 2.95
ATF4-201ENST00000337304 VAMP4O75379 141 aa33.49■■■□□ 2.95
ATF4-201ENST00000337304 ZNF428Q96B54 188 aa33.49■■■□□ 2.95
ATF4-201ENST00000337304 AHDC1Q5TGY3 1603 aaPredicted RBP33.48■■■□□ 2.95
ATF4-201ENST00000337304 ALDH1L2Q3SY69 923 aa33.48■■■□□ 2.95
ATF4-201ENST00000337304 C8orf58Q8NAV2 365 aa33.46■■■□□ 2.95
ATF4-201ENST00000337304 PLEKHO1Q53GL0 409 aaPredicted RBP33.45■■■□□ 2.95
ATF4-201ENST00000337304 IL17REQ8NFR9 667 aa33.45■■■□□ 2.95
ATF4-201ENST00000337304 HAP1P54257 671 aaPredicted RBP33.45■■■□□ 2.94
ATF4-201ENST00000337304 TWISTNBQ3B726 338 aaPredicted RBP33.45■■■□□ 2.94
ATF4-201ENST00000337304 AMOTQ4VCS5 1084 aa33.45■■■□□ 2.94
ATF4-201ENST00000337304 NLRP2Q9NX02 1062 aa33.45■■■□□ 2.94
ATF4-201ENST00000337304 PRDM11Q9NQV5 511 aa33.44■■■□□ 2.94
ATF4-201ENST00000337304 PANK1Q8TE04 598 aa33.43■■■□□ 2.94
ATF4-201ENST00000337304 ELL2O00472 640 aaPredicted RBP33.43■■■□□ 2.94
ATF4-201ENST00000337304 TNNQ9UQP3 1299 aa33.43■■■□□ 2.94
ATF4-201ENST00000337304 CSB-PGBD3P0DP91 1061 aa33.42■■■□□ 2.94
ATF4-201ENST00000337304 ZKSCAN2Q63HK3 967 aa33.41■■■□□ 2.94
ATF4-201ENST00000337304 MIS18AQ9NYP9 233 aa33.41■■■□□ 2.94
ATF4-201ENST00000337304 ZNF530Q6P9A1 599 aaPredicted RBP33.4■■■□□ 2.94
ATF4-201ENST00000337304 AKAP4Q5JQC9 854 aa33.4■■■□□ 2.94
ATF4-201ENST00000337304 VIRMAQ69YN4 1812 aaKnown RBP33.39■■■□□ 2.94
ATF4-201ENST00000337304 CEMIPQ8WUJ3 1361 aa33.39■■■□□ 2.94
ATF4-201ENST00000337304 BRPF1P55201 1214 aaPredicted RBP33.39■■■□□ 2.94
ATF4-201ENST00000337304 TSPYL4Q9UJ04 414 aa33.39■■■□□ 2.94
ATF4-201ENST00000337304 RLBP1P12271 317 aa33.38■■■□□ 2.93
ATF4-201ENST00000337304 KIF16BQ96L93 1317 aa33.38■■■□□ 2.93
ATF4-201ENST00000337304 NOB1Q9ULX3 412 aaKnown RBP33.38■■■□□ 2.93
ATF4-201ENST00000337304 COG6Q9Y2V7 657 aa33.38■■■□□ 2.93
ATF4-201ENST00000337304 KRT24Q2M2I5 525 aa33.36■■■□□ 2.93
ATF4-201ENST00000337304 RAPGEF4Q8WZA2 1011 aa33.36■■■□□ 2.93
ATF4-201ENST00000337304 COL5A2P05997 1499 aaPredicted RBP33.35■■■□□ 2.93
ATF4-201ENST00000337304 MRPL50Q8N5N7 158 aaKnown RBP33.35■■■□□ 2.93
ATF4-201ENST00000337304 CLUAP1Q96AJ1 413 aa33.35■■■□□ 2.93
ATF4-201ENST00000337304 COL22A1Q8NFW1 1626 aaPredicted RBP33.34■■■□□ 2.93
ATF4-201ENST00000337304 MEGF6O75095 1541 aa33.34■■■□□ 2.93
ATF4-201ENST00000337304 TRIM27P14373 513 aa33.33■■■□□ 2.93
ATF4-201ENST00000337304 TAF7Q15545 349 aaPredicted RBP33.33■■■□□ 2.93
ATF4-201ENST00000337304 ATF7IPQ6VMQ6 1270 aa33.33■■■□□ 2.93
ATF4-201ENST00000337304 LGR6Q9HBX8 967 aa33.33■■■□□ 2.93
ATF4-201ENST00000337304 C1orf141Q5JVX7 400 aa33.33■■■□□ 2.93
ATF4-201ENST00000337304 DZIP1LQ8IYY4 767 aaKnown RBP33.33■■■□□ 2.93
ATF4-201ENST00000337304 BABAM1Q9NWV8 329 aa33.33■■■□□ 2.93
ATF4-201ENST00000337304 WDR17Q8IZU2 1322 aa33.32■■■□□ 2.92
ATF4-201ENST00000337304 MS4A1P11836 297 aa33.32■■■□□ 2.92
ATF4-201ENST00000337304 TATP17735 454 aaPredicted RBP33.31■■■□□ 2.92
ATF4-201ENST00000337304 PHLPP1O60346 1717 aa33.31■■■□□ 2.92
ATF4-201ENST00000337304 IPO8O15397 1037 aaKnown RBP33.31■■■□□ 2.92
ATF4-201ENST00000337304 PLEKHG2Q9H7P9 1386 aa33.3■■■□□ 2.92
ATF4-201ENST00000337304 FTSJ3Q8IY81 847 aaKnown RBP33.29■■■□□ 2.92
ATF4-201ENST00000337304 MPRIPQ6WCQ1 1025 aa33.29■■■□□ 2.92
ATF4-201ENST00000337304 TCERG1O14776 1098 aaKnown RBP33.28■■■□□ 2.92
ATF4-201ENST00000337304 ADAMTS7Q9UKP4 1686 aa33.28■■■□□ 2.92
ATF4-201ENST00000337304 OVOS2A0A0G2JMS6 1433 aa33.28■■■□□ 2.92
ATF4-201ENST00000337304 COL16A1Q07092 1604 aaPredicted RBP33.28■■■□□ 2.92
ATF4-201ENST00000337304 PKD1L3Q7Z443 1732 aa33.27■■■□□ 2.92
ATF4-201ENST00000337304 TOM1O60784 492 aa33.27■■■□□ 2.92
ATF4-201ENST00000337304 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP33.27■■■□□ 2.924e-7■□□□□ 9.1
ATF4-201ENST00000337304 RNMTO43148 476 aaKnown RBP33.26■■■□□ 2.92
ATF4-201ENST00000337304 MVPQ14764 893 aaKnown RBP33.26■■■□□ 2.91
ATF4-201ENST00000337304 KDM3BQ7LBC6 1761 aa33.26■■■□□ 2.91
ATF4-201ENST00000337304 TOM1L2Q6ZVM7 507 aa33.25■■■□□ 2.91
ATF4-201ENST00000337304 SPG7Q9UQ90 795 aa33.24■■■□□ 2.91
ATF4-201ENST00000337304 ARHGAP45Q92619 1136 aa33.24■■■□□ 2.91
ATF4-201ENST00000337304 PARP4Q9UKK3 1724 aaKnown RBP33.22■■■□□ 2.91
ATF4-201ENST00000337304 TEFQ10587 303 aa33.22■■■□□ 2.91
ATF4-201ENST00000337304 SIPA1L3O60292 1781 aaPredicted RBP33.22■■■□□ 2.91
ATF4-201ENST00000337304 COL14A1Q05707 1796 aaKnown RBP33.21■■■□□ 2.91
ATF4-201ENST00000337304 AAMPQ13685 434 aa33.21■■■□□ 2.91
ATF4-201ENST00000337304 SCN11AQ9UI33 1791 aa33.21■■■□□ 2.91
ATF4-201ENST00000337304 PIP4K2BP78356 416 aa33.2■■■□□ 2.91
ATF4-201ENST00000337304 CARD10Q9BWT7 1032 aa33.19■■■□□ 2.9
ATF4-201ENST00000337304 STRN4Q9NRL3 753 aa33.19■■■□□ 2.9
ATF4-201ENST00000337304 KDM2BQ8NHM5 1336 aa33.19■■■□□ 2.9
ATF4-201ENST00000337304 PHKG2P15735 406 aa33.19■■■□□ 2.9
ATF4-201ENST00000337304 EVA1CP58658 441 aa33.18■■■□□ 2.9
ATF4-201ENST00000337304 LARP1Q6PKG0 1096 aaKnown RBP33.18■■■□□ 2.9
ATF4-201ENST00000337304 TMEM57Q8N5G2 664 aa33.18■■■□□ 2.9
ATF4-201ENST00000337304 IFNL2Q8IZJ0 200 aa33.16■■■□□ 2.9
ATF4-201ENST00000337304 SOS1Q07889 1333 aaPredicted RBP33.16■■■□□ 2.9
ATF4-201ENST00000337304 KDM6AO15550 1401 aaPredicted RBP33.16■■■□□ 2.9
ATF4-201ENST00000337304 ITPRIPQ8IWB1 547 aa33.16■■■□□ 2.9
ATF4-201ENST00000337304 BTBD11A6QL63 1104 aa33.15■■■□□ 2.9
ATF4-201ENST00000337304 BTG4Q9NY30 223 aa33.15■■■□□ 2.9
ATF4-201ENST00000337304 DDX19BQ9UMR2 479 aa33.14■■■□□ 2.9
ATF4-201ENST00000337304 CYP27B1O15528 508 aa33.14■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms