RNA–Protein interactions for RNA: ENST00000336803.1

CLDN2-201, Transcript of claudin 2, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN2, Length 2,959 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2-201ENST00000336803 C8orf58Q8NAV2 365 aa11.72□□□□□ -0.53
CLDN2-201ENST00000336803 HAP1P54257 671 aaPredicted RBP11.71□□□□□ -0.53
CLDN2-201ENST00000336803 DCTN1Q14203 1278 aa11.71□□□□□ -0.54
CLDN2-201ENST00000336803 MTHFSDQ2M296 383 aaKnown RBP11.71□□□□□ -0.54
CLDN2-201ENST00000336803 ABCC4O15439 1325 aa11.71□□□□□ -0.54
CLDN2-201ENST00000336803 GAS2L2Q8NHY3 880 aa11.7□□□□□ -0.54
CLDN2-201ENST00000336803 CHMP4BQ9H444 224 aaKnown RBP11.7□□□□□ -0.54
CLDN2-201ENST00000336803 KCNH5Q8NCM2 988 aa11.7□□□□□ -0.54
CLDN2-201ENST00000336803 IP6K1Q92551 441 aa11.7□□□□□ -0.54
CLDN2-201ENST00000336803 DCCP43146 1447 aa11.7□□□□□ -0.54
CLDN2-201ENST00000336803 ESCO1Q5FWF5 840 aa11.7□□□□□ -0.54
CLDN2-201ENST00000336803 ITPRIPQ8IWB1 547 aa11.7□□□□□ -0.54
CLDN2-201ENST00000336803 RBM33Q96EV2 1170 aaKnown RBP11.7□□□□□ -0.54
CLDN2-201ENST00000336803 CAMTA1Q9Y6Y1 1673 aa11.7□□□□□ -0.54
CLDN2-201ENST00000336803 STRCP1A6NGW2 1772 aa11.7□□□□□ -0.54
CLDN2-201ENST00000336803 C1orf167Q5SNV9 1468 aa11.69□□□□□ -0.54
CLDN2-201ENST00000336803 NCAPD2Q15021 1401 aa11.69□□□□□ -0.54
CLDN2-201ENST00000336803 SOX12O15370 315 aa11.69□□□□□ -0.54
CLDN2-201ENST00000336803 PSME1Q06323 249 aa11.69□□□□□ -0.54
CLDN2-201ENST00000336803 ALS2Q96Q42 1657 aa11.69□□□□□ -0.54
CLDN2-201ENST00000336803 PAK3O75914 559 aaPredicted RBP11.68□□□□□ -0.54
CLDN2-201ENST00000336803 MCM10Q7L590 875 aa11.68□□□□□ -0.54
CLDN2-201ENST00000336803 USP19O94966 1318 aa11.68□□□□□ -0.54
CLDN2-201ENST00000336803 ZBTB7BO15156 539 aaPredicted RBP11.68□□□□□ -0.54
CLDN2-201ENST00000336803 API5Q9BZZ5 524 aaKnown RBP11.68□□□□□ -0.54
CLDN2-201ENST00000336803 BABAM1Q9NWV8 329 aa11.68□□□□□ -0.54
CLDN2-201ENST00000336803 NUTM2GQ5VZR2 741 aa11.67□□□□□ -0.54
CLDN2-201ENST00000336803 C19orf44Q9H6X5 657 aa11.67□□□□□ -0.54
CLDN2-201ENST00000336803 PDZRN3Q9UPQ7 1066 aa11.67□□□□□ -0.54
CLDN2-201ENST00000336803 RGS3P49796 1198 aa11.67□□□□□ -0.54
CLDN2-201ENST00000336803 GLIPR1L2Q4G1C9 344 aa11.67□□□□□ -0.54
CLDN2-201ENST00000336803 PROSER2Q86WR7 435 aaPredicted RBP11.67□□□□□ -0.54
CLDN2-201ENST00000336803 SMC5Q8IY18 1101 aa11.67□□□□□ -0.54
CLDN2-201ENST00000336803 MSH6P52701 1360 aa11.67□□□□□ -0.54
CLDN2-201ENST00000336803 NOP58Q9Y2X3 529 aaKnown RBP11.67□□□□□ -0.54
CLDN2-201ENST00000336803 MED1Q15648 1581 aaPredicted RBP11.66□□□□□ -0.54
CLDN2-201ENST00000336803 SOS1Q07889 1333 aaPredicted RBP11.66□□□□□ -0.54
CLDN2-201ENST00000336803 RGS12O14924 1447 aa11.66□□□□□ -0.54
CLDN2-201ENST00000336803 LMO7Q8WWI1 1683 aa11.66□□□□□ -0.54
CLDN2-201ENST00000336803 FOXO3O43524 673 aa11.66□□□□□ -0.54
CLDN2-201ENST00000336803 ORAI2Q96SN7 254 aa11.66□□□□□ -0.54
CLDN2-201ENST00000336803 RTF1Q92541 710 aaKnown RBP11.65□□□□□ -0.54
CLDN2-201ENST00000336803 MAP3K5Q99683 1374 aa11.65□□□□□ -0.54
CLDN2-201ENST00000336803 LMTK3Q96Q04 1460 aa11.65□□□□□ -0.54
CLDN2-201ENST00000336803 GNAT3A8MTJ3 354 aa11.65□□□□□ -0.54
CLDN2-201ENST00000336803 PTPRCP08575 1304 aa11.65□□□□□ -0.55
CLDN2-201ENST00000336803 RGPD2P0DJD1 1756 aa11.65□□□□□ -0.55
CLDN2-201ENST00000336803 INTS3Q68E01 1043 aaKnown RBP11.64□□□□□ -0.55
CLDN2-201ENST00000336803 ARHGEF25Q86VW2 580 aa11.64□□□□□ -0.55
CLDN2-201ENST00000336803 ELL2O00472 640 aaPredicted RBP11.64□□□□□ -0.55
CLDN2-201ENST00000336803 C14orf37Q86TY3 774 aa11.64□□□□□ -0.55
CLDN2-201ENST00000336803 FAM208AQ9UK61 1670 aaKnown RBP11.63□□□□□ -0.55
CLDN2-201ENST00000336803 CEMIPQ8WUJ3 1361 aa11.63□□□□□ -0.55
CLDN2-201ENST00000336803 CACNA1FO60840 1977 aa11.63□□□□□ -0.55
CLDN2-201ENST00000336803 GCP02774 474 aa11.63□□□□□ -0.55
CLDN2-201ENST00000336803 IL27Q8NEV9 243 aa11.63□□□□□ -0.55
CLDN2-201ENST00000336803 DDRGK1Q96HY6 314 aa11.63□□□□□ -0.55
CLDN2-201ENST00000336803 N4BP2Q86UW6 1770 aaPredicted RBP11.62□□□□□ -0.55
CLDN2-201ENST00000336803 KRT28Q7Z3Y7 464 aa11.62□□□□□ -0.55
CLDN2-201ENST00000336803 ZBTB47Q9UFB7 747 aaPredicted RBP11.62□□□□□ -0.55
CLDN2-201ENST00000336803 KDM3BQ7LBC6 1761 aa11.62□□□□□ -0.55
CLDN2-201ENST00000336803 ABCC6O95255 1503 aa11.62□□□□□ -0.55
CLDN2-201ENST00000336803 TSPYL4Q9UJ04 414 aa11.62□□□□□ -0.55
CLDN2-201ENST00000336803 XIRP1Q702N8 1843 aaKnown RBP11.62□□□□□ -0.55
CLDN2-201ENST00000336803 OVOS2A0A0G2JMS6 1433 aa11.62□□□□□ -0.55
CLDN2-201ENST00000336803 NUCB1Q02818 461 aa11.61□□□□□ -0.55
CLDN2-201ENST00000336803 KRT24Q2M2I5 525 aa11.61□□□□□ -0.55
CLDN2-201ENST00000336803 NBPF6Q5VWK0 638 aa11.61□□□□□ -0.55
CLDN2-201ENST00000336803 IL17REQ8NFR9 667 aa11.61□□□□□ -0.55
CLDN2-201ENST00000336803 NBPF4Q96M43 638 aa11.61□□□□□ -0.55
CLDN2-201ENST00000336803 TMEM94Q12767 1356 aa11.61□□□□□ -0.55
CLDN2-201ENST00000336803 GCC1Q96CN9 775 aa11.61□□□□□ -0.55
CLDN2-201ENST00000336803 CRYBG1Q9Y4K1 1723 aa11.61□□□□□ -0.55
CLDN2-201ENST00000336803 ADAMTS7Q9UKP4 1686 aa11.61□□□□□ -0.55
CLDN2-201ENST00000336803 TAF7Q15545 349 aaPredicted RBP11.6□□□□□ -0.55
CLDN2-201ENST00000336803 COL18A1P39060 1754 aa11.6□□□□□ -0.55
CLDN2-201ENST00000336803 PLEKHG2Q9H7P9 1386 aa11.6□□□□□ -0.55
CLDN2-201ENST00000336803 STRCQ7RTU9 1775 aa11.59□□□□□ -0.55
CLDN2-201ENST00000336803 NPM2Q86SE8 214 aaKnown RBP11.59□□□□□ -0.55
CLDN2-201ENST00000336803 SIRT2Q8IXJ6 389 aa11.59□□□□□ -0.55
CLDN2-201ENST00000336803 LTV1Q96GA3 475 aaPredicted RBP11.59□□□□□ -0.55
CLDN2-201ENST00000336803 ATF3P18847 181 aa11.58□□□□□ -0.55
CLDN2-201ENST00000336803 RGPD5Q99666 1765 aa11.58□□□□□ -0.55
CLDN2-201ENST00000336803 MIS18AQ9NYP9 233 aa11.58□□□□□ -0.55
CLDN2-201ENST00000336803 SIPA1L3O60292 1781 aaPredicted RBP11.58□□□□□ -0.56
CLDN2-201ENST00000336803 PXDNQ92626 1479 aa11.58□□□□□ -0.56
CLDN2-201ENST00000336803 AMOTQ4VCS5 1084 aa11.58□□□□□ -0.56
CLDN2-201ENST00000336803 AKAP4Q5JQC9 854 aa11.57□□□□□ -0.56
CLDN2-201ENST00000336803 CADPS2Q86UW7 1296 aa11.57□□□□□ -0.56
CLDN2-201ENST00000336803 USHBP1Q8N6Y0 703 aa11.57□□□□□ -0.56
CLDN2-201ENST00000336803 ATP10DQ9P241 1426 aa11.57□□□□□ -0.56
CLDN2-201ENST00000336803 SLC4A2P04920 1241 aa11.57□□□□□ -0.56
CLDN2-201ENST00000336803 CHD1LQ86WJ1 897 aa11.57□□□□□ -0.56
CLDN2-201ENST00000336803 PXDNLA1KZ92 1463 aa11.57□□□□□ -0.56
CLDN2-201ENST00000336803 PLEKHO1Q53GL0 409 aaPredicted RBP11.56□□□□□ -0.56
CLDN2-201ENST00000336803 RTL5Q5HYW3 569 aaPredicted RBP11.56□□□□□ -0.56
CLDN2-201ENST00000336803 CCDC30Q5VVM6 783 aa11.56□□□□□ -0.56
CLDN2-201ENST00000336803 HOXB7P09629 217 aa11.56□□□□□ -0.56
CLDN2-201ENST00000336803 XPCQ01831 940 aaPredicted RBP11.56□□□□□ -0.56
CLDN2-201ENST00000336803 ANKRD24Q8TF21 1146 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms