RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 TMEM132EQ6IEE7 984 aa15.33■□□□□ 0.04
HLCS-201ENST00000336648 BRPF3Q9ULD4 1205 aa15.33■□□□□ 0.04
HLCS-201ENST00000336648 TICAM2Q86XR7 235 aa15.32■□□□□ 0.04
HLCS-201ENST00000336648 CCDC102AQ96A19 550 aa15.32■□□□□ 0.04
HLCS-201ENST00000336648 IMMTQ16891 758 aaKnown RBP15.32■□□□□ 0.04
HLCS-201ENST00000336648 IL27Q8NEV9 243 aa15.32■□□□□ 0.04
HLCS-201ENST00000336648 SLC52A1Q9NWF4 448 aa15.32■□□□□ 0.04
HLCS-201ENST00000336648 PLEKHH1Q9ULM0 1364 aa15.32■□□□□ 0.04
HLCS-201ENST00000336648 CFAP70Q5T0N1 1121 aa15.32■□□□□ 0.04
HLCS-201ENST00000336648 CCDC91Q7Z6B0 441 aa15.32■□□□□ 0.04
HLCS-201ENST00000336648 CDCA7LQ96GN5 454 aa15.32■□□□□ 0.04
HLCS-201ENST00000336648 ZSCAN12O43309 604 aa15.31■□□□□ 0.04
HLCS-201ENST00000336648 DDX11Q96FC9 970 aa15.31■□□□□ 0.04
HLCS-201ENST00000336648 PHAXQ9H814 394 aaKnown RBP15.31■□□□□ 0.04
HLCS-201ENST00000336648 ESCO1Q5FWF5 840 aa15.31■□□□□ 0.04
HLCS-201ENST00000336648 MAP3K11Q16584 847 aa15.31■□□□□ 0.04
HLCS-201ENST00000336648 ZNF530Q6P9A1 599 aaPredicted RBP15.31■□□□□ 0.04
HLCS-201ENST00000336648 KIAA1107Q9UPP5 1409 aa15.31■□□□□ 0.04
HLCS-201ENST00000336648 SYNJ2O15056 1496 aa15.31■□□□□ 0.04
HLCS-201ENST00000336648 FCHSD2O94868 740 aa15.31■□□□□ 0.04
HLCS-201ENST00000336648 ARHGAP29Q52LW3 1261 aa15.31■□□□□ 0.04
HLCS-201ENST00000336648 ZHX3Q9H4I2 956 aa15.31■□□□□ 0.04
HLCS-201ENST00000336648 ANKRD30BQ9BXX2 1392 aa15.31■□□□□ 0.04
HLCS-201ENST00000336648 AACSQ86V21 672 aa15.3■□□□□ 0.04
HLCS-201ENST00000336648 RUSC2Q8N2Y8 1516 aa15.3■□□□□ 0.04
HLCS-201ENST00000336648 RAB11FIP3O75154 756 aa15.3■□□□□ 0.04
HLCS-201ENST00000336648 KDM4AO75164 1064 aa15.3■□□□□ 0.04
HLCS-201ENST00000336648 MAP9Q49MG5 647 aa15.3■□□□□ 0.04
HLCS-201ENST00000336648 NUTM2GQ5VZR2 741 aa15.3■□□□□ 0.04
HLCS-201ENST00000336648 SULT6B1Q6IMI4 303 aa15.3■□□□□ 0.04
HLCS-201ENST00000336648 TXNDC2Q86VQ3 553 aa15.3■□□□□ 0.04
HLCS-201ENST00000336648 THEMISQ8N1K5 641 aaPredicted RBP15.3■□□□□ 0.04
HLCS-201ENST00000336648 MCM4P33991 863 aa15.3■□□□□ 0.04
HLCS-201ENST00000336648 NUP133Q8WUM0 1156 aa15.3■□□□□ 0.04
HLCS-201ENST00000336648 UBXN4Q92575 508 aa15.3■□□□□ 0.04
HLCS-201ENST00000336648 C1orf115Q9H7X2 142 aa15.3■□□□□ 0.04
HLCS-201ENST00000336648 EIF5P55010 431 aaKnown RBP15.3■□□□□ 0.04
HLCS-201ENST00000336648 STK3Q13188 491 aa15.3■□□□□ 0.04
HLCS-201ENST00000336648 SPATA24Q86W54 205 aa15.3■□□□□ 0.04
HLCS-201ENST00000336648 PRAM1Q96QH2 718 aa15.3■□□□□ 0.04
HLCS-201ENST00000336648 KIAA1328Q86T90 577 aa15.29■□□□□ 0.04
HLCS-201ENST00000336648 CEP63Q96MT8 703 aa15.29■□□□□ 0.04
HLCS-201ENST00000336648 JAKMIP1Q96N16 626 aaKnown RBP15.29■□□□□ 0.04
HLCS-201ENST00000336648 TDO2P48775 406 aa15.29■□□□□ 0.04
HLCS-201ENST00000336648 MAP2K1Q02750 393 aaPredicted RBP15.29■□□□□ 0.04
HLCS-201ENST00000336648 CALCOCO1Q9P1Z2 691 aa15.29■□□□□ 0.04
HLCS-201ENST00000336648 GOLGA6L10A0A0M3HER8 536 aa15.29■□□□□ 0.04
HLCS-201ENST00000336648 FAM107BQ9H098 131 aa15.29■□□□□ 0.04
HLCS-201ENST00000336648 ZNF644Q9H582 1327 aaPredicted RBP15.29■□□□□ 0.04
HLCS-201ENST00000336648 PROSER2Q86WR7 435 aaPredicted RBP15.29■□□□□ 0.04
HLCS-201ENST00000336648 ATP2B2Q01814 1243 aa15.28■□□□□ 0.04
HLCS-201ENST00000336648 CCDC196A0A1B0GTZ2 297 aa15.28■□□□□ 0.04
HLCS-201ENST00000336648 SRGAP3O43295 1099 aa15.28■□□□□ 0.04
HLCS-201ENST00000336648 FGFR1OPO95684 399 aaKnown RBP15.28■□□□□ 0.04
HLCS-201ENST00000336648 KLHL34Q8N239 644 aa15.28■□□□□ 0.04
HLCS-201ENST00000336648 SCAND2PQ9GZW5 306 aaPredicted RBP15.28■□□□□ 0.04
HLCS-201ENST00000336648 AKAP2Q9Y2D5 859 aa15.28■□□□□ 0.04
HLCS-201ENST00000336648 ESPNB1AK53 854 aa15.28■□□□□ 0.04
HLCS-201ENST00000336648 STAMBPO95630 424 aa15.28■□□□□ 0.04
HLCS-201ENST00000336648 GPATCH11Q8N954 259 aa15.28■□□□□ 0.04
HLCS-201ENST00000336648 SH2B1Q9NRF2 756 aaPredicted RBP15.28■□□□□ 0.04
HLCS-201ENST00000336648 U3KPZ7 1027 aaPredicted RBP15.27■□□□□ 0.04
HLCS-201ENST00000336648 CDK19Q9BWU1 502 aa15.27■□□□□ 0.04
HLCS-201ENST00000336648 ANO10Q9NW15 660 aa15.27■□□□□ 0.04
HLCS-201ENST00000336648 POLA1P09884 1462 aaPredicted RBP15.27■□□□□ 0.03
HLCS-201ENST00000336648 CTAGE5O15320 804 aa15.27■□□□□ 0.03
HLCS-201ENST00000336648 KIF20AO95235 890 aa15.27■□□□□ 0.03
HLCS-201ENST00000336648 VPS36Q86VN1 386 aa15.27■□□□□ 0.03
HLCS-201ENST00000336648 ZSCAN30Q86W11 494 aa15.27■□□□□ 0.03
HLCS-201ENST00000336648 PPM1EQ8WY54 764 aa15.27■□□□□ 0.03
HLCS-201ENST00000336648 CRACR2AQ9BSW2 395 aa15.27■□□□□ 0.03
HLCS-201ENST00000336648 HMGB1P09429 215 aaKnown RBP15.27■□□□□ 0.03
HLCS-201ENST00000336648 TNIP1Q15025 636 aa15.27■□□□□ 0.03
HLCS-201ENST00000336648 SPA17Q15506 151 aa15.27■□□□□ 0.03
HLCS-201ENST00000336648 TMCO3Q6UWJ1 677 aa15.27■□□□□ 0.03
HLCS-201ENST00000336648 MICALCLQ6ZW33 695 aa15.27■□□□□ 0.03
HLCS-201ENST00000336648 TSR2Q969E8 191 aaKnown RBP15.27■□□□□ 0.03
HLCS-201ENST00000336648 LRRFIP2Q9Y608 721 aaKnown RBP15.27■□□□□ 0.03
HLCS-201ENST00000336648 RTEL1-TNFRSF6BF6WH68 1400 aa15.26■□□□□ 0.03
HLCS-201ENST00000336648 ERBINQ96RT1 1412 aa15.26■□□□□ 0.03
HLCS-201ENST00000336648 FAM177BA6PVY3 158 aa15.26■□□□□ 0.03
HLCS-201ENST00000336648 CCDC83Q8IWF9 413 aa15.26■□□□□ 0.03
HLCS-201ENST00000336648 NEMFO60524 1076 aa15.26■□□□□ 0.03
HLCS-201ENST00000336648 GLRX3O76003 335 aaKnown RBP15.26■□□□□ 0.03
HLCS-201ENST00000336648 BCAR3O75815 825 aa15.26■□□□□ 0.03
HLCS-201ENST00000336648 KIF1BPQ96EK5 621 aa15.26■□□□□ 0.03
HLCS-201ENST00000336648 SFPQP23246 707 aaKnown RBP eCLIP15.26■□□□□ 0.03
HLCS-201ENST00000336648 ZNF76P36508 570 aa15.26■□□□□ 0.03
HLCS-201ENST00000336648 IGHMBP2P38935 993 aaKnown RBP15.26■□□□□ 0.03
HLCS-201ENST00000336648 FKBP15Q5T1M5 1219 aa15.26■□□□□ 0.03
HLCS-201ENST00000336648 TSG101Q99816 390 aa15.26■□□□□ 0.03
HLCS-201ENST00000336648 NEBLO76041 1014 aa15.25■□□□□ 0.03
HLCS-201ENST00000336648 PRDM2Q13029 1718 aa15.25■□□□□ 0.03
HLCS-201ENST00000336648 ABCC11Q96J66 1382 aa15.25■□□□□ 0.03
HLCS-201ENST00000336648 FKBP4Q02790 459 aaKnown RBP eCLIP15.25■□□□□ 0.03
HLCS-201ENST00000336648 SIL1Q9H173 461 aa15.25■□□□□ 0.03
HLCS-201ENST00000336648 SEPT11Q9NVA2 429 aaKnown RBP15.25■□□□□ 0.03
HLCS-201ENST00000336648 DAPK1P53355 1430 aa15.25■□□□□ 0.03
HLCS-201ENST00000336648 MPHOSPH10O00566 681 aaKnown RBP15.25■□□□□ 0.03
HLCS-201ENST00000336648 ERICH3Q5RHP9 1530 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms