RNA–Protein interactions for RNA: ENST00000335535.3

LCE4A-201, Transcript of late cornified envelope 4A, humanhuman

APPRIS P1 BASIC

Gene LCE4A, Length 388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCE4A-201ENST00000335535 TOMM70O94826 608 aa16.83■□□□□ 0.28
LCE4A-201ENST00000335535 TTC21BQ7Z4L5 1316 aa16.83■□□□□ 0.28
LCE4A-201ENST00000335535 COL23A1Q86Y22 540 aaPredicted RBP16.83■□□□□ 0.28
LCE4A-201ENST00000335535 PCNTO95613 3336 aa16.82■□□□□ 0.28
LCE4A-201ENST00000335535 NSD2O96028 1365 aa16.82■□□□□ 0.28
LCE4A-201ENST00000335535 TTC21AQ8NDW8 1320 aa16.82■□□□□ 0.28
LCE4A-201ENST00000335535 ANKRD36BQ8N2N9 1353 aa16.81■□□□□ 0.28
LCE4A-201ENST00000335535 CENPJQ9HC77 1338 aaPredicted RBP16.81■□□□□ 0.28
LCE4A-201ENST00000335535 ZNF316A6NFI3 1004 aaPredicted RBP16.81■□□□□ 0.28
LCE4A-201ENST00000335535 USP54Q70EL1 1684 aa16.81■□□□□ 0.28
LCE4A-201ENST00000335535 KCNQ4P56696 695 aa16.8■□□□□ 0.28
LCE4A-201ENST00000335535 TESK2Q96S53 571 aa16.8■□□□□ 0.28
LCE4A-201ENST00000335535 CAPN15O75808 1086 aa16.79■□□□□ 0.28
LCE4A-201ENST00000335535 TNS4Q8IZW8 715 aa16.79■□□□□ 0.28
LCE4A-201ENST00000335535 KLRG1Q96E93 195 aa16.79■□□□□ 0.28
LCE4A-201ENST00000335535 ZNF692Q9BU19 519 aaPredicted RBP16.79■□□□□ 0.28
LCE4A-201ENST00000335535 NLRP2Q9NX02 1062 aa16.79■□□□□ 0.28
LCE4A-201ENST00000335535 SBNO2Q9Y2G9 1366 aa16.78■□□□□ 0.28
LCE4A-201ENST00000335535 ST20-MTHFSA0A0A6YYL1 179 aa16.78■□□□□ 0.28
LCE4A-201ENST00000335535 DOT1LQ8TEK3 1739 aa16.78■□□□□ 0.28
LCE4A-201ENST00000335535 KAT6BQ8WYB5 2073 aa16.77■□□□□ 0.28
LCE4A-201ENST00000335535 SOX12O15370 315 aa16.77■□□□□ 0.28
LCE4A-201ENST00000335535 SLC34A2O95436 690 aa16.77■□□□□ 0.28
LCE4A-201ENST00000335535 MSL1Q68DK7 614 aa16.77■□□□□ 0.28
LCE4A-201ENST00000335535 IGSF1Q8N6C5 1336 aa16.76■□□□□ 0.27
LCE4A-201ENST00000335535 CCNL1Q9UK58 526 aaPredicted RBP16.76■□□□□ 0.27
LCE4A-201ENST00000335535 USP31Q70CQ4 1352 aa16.76■□□□□ 0.27
LCE4A-201ENST00000335535 MSH5O43196 834 aa16.75■□□□□ 0.27
LCE4A-201ENST00000335535 PRIM1P49642 420 aaKnown RBP16.75■□□□□ 0.27
LCE4A-201ENST00000335535 FLAD1Q8NFF5 587 aa16.74■□□□□ 0.27
LCE4A-201ENST00000335535 RBM46Q8TBY0 533 aaKnown RBP16.74■□□□□ 0.27
LCE4A-201ENST00000335535 C5P01031 1676 aa16.74■□□□□ 0.27
LCE4A-201ENST00000335535 LTN1O94822 1766 aa16.74■□□□□ 0.27
LCE4A-201ENST00000335535 FAM208AQ9UK61 1670 aaKnown RBP16.73■□□□□ 0.27
LCE4A-201ENST00000335535 ANKRD24Q8TF21 1146 aa16.73■□□□□ 0.27
LCE4A-201ENST00000335535 SLC24A1O60721 1099 aa16.72■□□□□ 0.27
LCE4A-201ENST00000335535 HMGB2P26583 209 aaKnown RBP16.72■□□□□ 0.27
LCE4A-201ENST00000335535 DDX54Q8TDD1 881 aaKnown RBP16.72■□□□□ 0.27
LCE4A-201ENST00000335535 MON2Q7Z3U7 1717 aa16.7■□□□□ 0.26
LCE4A-201ENST00000335535 SYTL4Q96C24 671 aaPredicted RBP16.7■□□□□ 0.26
LCE4A-201ENST00000335535 EVC2Q86UK5 1308 aa16.7■□□□□ 0.26
LCE4A-201ENST00000335535 FSTL1Q12841 308 aa16.69■□□□□ 0.26
LCE4A-201ENST00000335535 PUS7Q96PZ0 661 aaKnown RBP16.69■□□□□ 0.26
LCE4A-201ENST00000335535 WASHC2AQ641Q2 1341 aa16.69■□□□□ 0.26
LCE4A-201ENST00000335535 TAF1LQ8IZX4 1826 aa16.68■□□□□ 0.26
LCE4A-201ENST00000335535 TOGARAM1Q9Y4F4 1720 aa16.68■□□□□ 0.26
LCE4A-201ENST00000335535 KTN1Q86UP2 1357 aaKnown RBP16.68■□□□□ 0.26
LCE4A-201ENST00000335535 NMRK2Q9NPI5 230 aa16.68■□□□□ 0.26
LCE4A-201ENST00000335535 HTRA3P83110 453 aa16.67■□□□□ 0.26
LCE4A-201ENST00000335535 C10orf71Q711Q0 1435 aa16.67■□□□□ 0.26
LCE4A-201ENST00000335535 KIF7Q2M1P5 1343 aa16.67■□□□□ 0.26
LCE4A-201ENST00000335535 KIAA1551Q9HCM1 1747 aa16.66■□□□□ 0.26
LCE4A-201ENST00000335535 C4BP0C0L5 1744 aa16.65■□□□□ 0.26
LCE4A-201ENST00000335535 KIF13BQ9NQT8 1826 aa16.65■□□□□ 0.26
LCE4A-201ENST00000335535 NSD3Q9BZ95 1437 aa16.64■□□□□ 0.25
LCE4A-201ENST00000335535 TMF1P82094 1093 aa16.64■□□□□ 0.25
LCE4A-201ENST00000335535 WWC3Q9ULE0 1092 aa16.64■□□□□ 0.25
LCE4A-201ENST00000335535 PXDNLA1KZ92 1463 aa16.64■□□□□ 0.25
LCE4A-201ENST00000335535 UBR3Q6ZT12 1888 aa16.63■□□□□ 0.25
LCE4A-201ENST00000335535 ZCRB1Q8TBF4 217 aaKnown RBP16.63■□□□□ 0.25
LCE4A-201ENST00000335535 PLEKHG2Q9H7P9 1386 aa16.63■□□□□ 0.25
LCE4A-201ENST00000335535 MEGF6O75095 1541 aa16.62■□□□□ 0.25
LCE4A-201ENST00000335535 AMIGO3Q86WK7 504 aa16.62■□□□□ 0.25
LCE4A-201ENST00000335535 IP6K1Q92551 441 aa16.62■□□□□ 0.25
LCE4A-201ENST00000335535 CD163L1Q9NR16 1453 aa16.61■□□□□ 0.25
LCE4A-201ENST00000335535 CDCA8Q53HL2 280 aa16.6■□□□□ 0.25
LCE4A-201ENST00000335535 NME9Q86XW9 330 aa16.6■□□□□ 0.25
LCE4A-201ENST00000335535 C16orf71Q8IYS4 520 aaPredicted RBP16.6■□□□□ 0.25
LCE4A-201ENST00000335535 PALLDQ8WX93 1383 aa16.6■□□□□ 0.25
LCE4A-201ENST00000335535 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.58■□□□□ 0.24
LCE4A-201ENST00000335535 HSPA1AP0DMV8 641 aaKnown RBP16.58■□□□□ 0.24
LCE4A-201ENST00000335535 HSPA1BP0DMV9 641 aaKnown RBP16.58■□□□□ 0.24
LCE4A-201ENST00000335535 SSFA2P28290 1259 aa16.58■□□□□ 0.24
LCE4A-201ENST00000335535 TGFB2P61812 414 aa16.58■□□□□ 0.24
LCE4A-201ENST00000335535 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.58■□□□□ 0.24
LCE4A-201ENST00000335535 AK7Q96M32 723 aa16.58■□□□□ 0.24
LCE4A-201ENST00000335535 PCDH10Q9P2E7 1040 aa16.58■□□□□ 0.24
LCE4A-201ENST00000335535 CGNL1Q0VF96 1302 aa16.58■□□□□ 0.24
LCE4A-201ENST00000335535 PKD1L3Q7Z443 1732 aa16.58■□□□□ 0.24
LCE4A-201ENST00000335535 TNRC6CQ9HCJ0 1690 aaKnown RBP16.57■□□□□ 0.24
LCE4A-201ENST00000335535 EDC4Q6P2E9 1401 aaKnown RBP16.56■□□□□ 0.24
LCE4A-201ENST00000335535 BRCA1P38398 1863 aaKnown RBP16.56■□□□□ 0.24
LCE4A-201ENST00000335535 N4BP2Q86UW6 1770 aaPredicted RBP16.56■□□□□ 0.24
LCE4A-201ENST00000335535 KCPQ6ZWJ8 1503 aa16.55■□□□□ 0.24
LCE4A-201ENST00000335535 KDM2BQ8NHM5 1336 aa16.55■□□□□ 0.24
LCE4A-201ENST00000335535 BCS1LQ9Y276 419 aa16.55■□□□□ 0.24
LCE4A-201ENST00000335535 ARHGAP27Q6ZUM4 889 aa16.54■□□□□ 0.24
LCE4A-201ENST00000335535 SMC1BQ8NDV3 1235 aa16.54■□□□□ 0.24
LCE4A-201ENST00000335535 PHF14O94880 888 aa16.53■□□□□ 0.24
LCE4A-201ENST00000335535 C9orf131Q5VYM1 1079 aa16.53■□□□□ 0.24
LCE4A-201ENST00000335535 SMARCC1Q92922 1105 aaPredicted RBP16.53■□□□□ 0.24
LCE4A-201ENST00000335535 LTV1Q96GA3 475 aaPredicted RBP16.53■□□□□ 0.24
LCE4A-201ENST00000335535 MAP2P11137 1827 aaKnown RBP16.53■□□□□ 0.24
LCE4A-201ENST00000335535 ARFGEF1Q9Y6D6 1849 aa16.53■□□□□ 0.24
LCE4A-201ENST00000335535 RGPD2P0DJD1 1756 aa16.53■□□□□ 0.24
LCE4A-201ENST00000335535 DDX10Q13206 875 aaKnown RBP16.52■□□□□ 0.24
LCE4A-201ENST00000335535 MMP10P09238 476 aa16.51■□□□□ 0.23
LCE4A-201ENST00000335535 HOXC9P31274 260 aa16.51■□□□□ 0.23
LCE4A-201ENST00000335535 SMIM5Q71RC9 77 aa16.51■□□□□ 0.23
LCE4A-201ENST00000335535 A0A0G2JLW4 131 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms