RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 NACAP1Q9BZK3 213 aa18.04■□□□□ 0.48
C9orf47-201ENST00000334490 CHD1LQ86WJ1 897 aa18.04■□□□□ 0.48
C9orf47-201ENST00000334490 FANCIQ9NVI1 1328 aa18.03■□□□□ 0.48
C9orf47-201ENST00000334490 XBP1P17861 261 aa18.03■□□□□ 0.48
C9orf47-201ENST00000334490 RARSP54136 660 aaKnown RBP18.03■□□□□ 0.48
C9orf47-201ENST00000334490 CCDC47Q96A33 483 aaKnown RBP18.03■□□□□ 0.48
C9orf47-201ENST00000334490 F6X3S4 739 aa18.03■□□□□ 0.48
C9orf47-201ENST00000334490 RBM5P52756 815 aaKnown RBP eCLIP18.02■□□□□ 0.48
C9orf47-201ENST00000334490 ALDH1L2Q3SY69 923 aa18.02■□□□□ 0.48
C9orf47-201ENST00000334490 CCDC43Q96MW1 224 aaKnown RBP18.02■□□□□ 0.48
C9orf47-201ENST00000334490 PPIP5K1Q6PFW1 1433 aa18.02■□□□□ 0.48
C9orf47-201ENST00000334490 FAM83GA6ND36 823 aa18.02■□□□□ 0.47
C9orf47-201ENST00000334490 METTL24Q5JXM2 366 aa18.02■□□□□ 0.47
C9orf47-201ENST00000334490 STK11IPQ8N1F8 1099 aa18.02■□□□□ 0.47
C9orf47-201ENST00000334490 BRMS1Q9HCU9 246 aa18.02■□□□□ 0.47
C9orf47-201ENST00000334490 CABLES1Q8TDN4 633 aa18.01■□□□□ 0.47
C9orf47-201ENST00000334490 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.01■□□□□ 0.47
C9orf47-201ENST00000334490 ATP2B2Q01814 1243 aa18.01■□□□□ 0.47
C9orf47-201ENST00000334490 ZSCAN25Q6NSZ9 544 aa18.01■□□□□ 0.47
C9orf47-201ENST00000334490 DNAAF4Q8WXU2 420 aa18.01■□□□□ 0.47
C9orf47-201ENST00000334490 SPINK5Q9NQ38 1064 aaPredicted RBP18.01■□□□□ 0.47
C9orf47-201ENST00000334490 TRMT112Q9UI30 125 aaKnown RBP18.01■□□□□ 0.47
C9orf47-201ENST00000334490 TBX22Q9Y458 520 aa18.01■□□□□ 0.47
C9orf47-201ENST00000334490 TCOF1Q13428 1488 aaKnown RBP18■□□□□ 0.47
C9orf47-201ENST00000334490 HYPKQ9NX55 129 aa18■□□□□ 0.47
C9orf47-201ENST00000334490 RAI14Q9P0K7 980 aa18■□□□□ 0.47
C9orf47-201ENST00000334490 ZBTB3Q9H5J0 574 aa18■□□□□ 0.47
C9orf47-201ENST00000334490 LRP2BPQ9P2M1 347 aa18■□□□□ 0.47
C9orf47-201ENST00000334490 PRAG1Q86YV5 1406 aa17.99■□□□□ 0.47
C9orf47-201ENST00000334490 HSP90AB3PQ58FF7 597 aa17.99■□□□□ 0.47
C9orf47-201ENST00000334490 CEP170Q5SW79 1584 aa17.99■□□□□ 0.47
C9orf47-201ENST00000334490 TSR1Q2NL82 804 aaKnown RBP17.99■□□□□ 0.47
C9orf47-201ENST00000334490 ABCF2Q9UG63 623 aa17.99■□□□□ 0.47
C9orf47-201ENST00000334490 ZRANB1Q9UGI0 708 aa17.99■□□□□ 0.47
C9orf47-201ENST00000334490 IDH1O75874 414 aaKnown RBP17.98■□□□□ 0.47
C9orf47-201ENST00000334490 ATP2B1P20020 1258 aa17.98■□□□□ 0.47
C9orf47-201ENST00000334490 HOOK1Q9UJC3 728 aaKnown RBP17.98■□□□□ 0.47
C9orf47-201ENST00000334490 GPTP24298 496 aa17.98■□□□□ 0.47
C9orf47-201ENST00000334490 CCDC73Q6ZRK6 1079 aa17.98■□□□□ 0.47
C9orf47-201ENST00000334490 TEX13AQ9BXU3 409 aaPredicted RBP17.98■□□□□ 0.47
C9orf47-201ENST00000334490 TPM2P07951 284 aa17.98■□□□□ 0.47
C9orf47-201ENST00000334490 FLIIQ13045 1269 aa17.98■□□□□ 0.47
C9orf47-201ENST00000334490 TPM3P06753 285 aa17.97■□□□□ 0.47
C9orf47-201ENST00000334490 NUTM1Q86Y26 1132 aa17.97■□□□□ 0.47
C9orf47-201ENST00000334490 KIF1BPQ96EK5 621 aa17.97■□□□□ 0.47
C9orf47-201ENST00000334490 A0A087WZG4 1122 aa17.97■□□□□ 0.47
C9orf47-201ENST00000334490 ZCRB1Q8TBF4 217 aaKnown RBP17.97■□□□□ 0.47
C9orf47-201ENST00000334490 C8orf37Q96NL8 207 aa17.97■□□□□ 0.47
C9orf47-201ENST00000334490 CEP89Q96ST8 783 aa17.97■□□□□ 0.47
C9orf47-201ENST00000334490 RABEP1Q15276 862 aa17.97■□□□□ 0.47
C9orf47-201ENST00000334490 IFIT5Q13325 482 aaKnown RBP17.96■□□□□ 0.47
C9orf47-201ENST00000334490 ATP10AO60312 1499 aa17.96■□□□□ 0.47
C9orf47-201ENST00000334490 PDE4CQ08493 712 aa17.96■□□□□ 0.47
C9orf47-201ENST00000334490 ZSCAN29Q8IWY8 852 aaPredicted RBP17.96■□□□□ 0.47
C9orf47-201ENST00000334490 SHANK2Q9UPX8 1470 aa17.96■□□□□ 0.47
C9orf47-201ENST00000334490 MCM2P49736 904 aa17.96■□□□□ 0.46
C9orf47-201ENST00000334490 CYP46A1Q9Y6A2 500 aa17.96■□□□□ 0.46
C9orf47-201ENST00000334490 RALGAPBQ86X10 1494 aa17.95■□□□□ 0.46
C9orf47-201ENST00000334490 CWC27Q6UX04 472 aaKnown RBP17.95■□□□□ 0.46
C9orf47-201ENST00000334490 IFIT1P09914 478 aaKnown RBP17.95■□□□□ 0.46
C9orf47-201ENST00000334490 MBIPQ9NS73 344 aa17.95■□□□□ 0.46
C9orf47-201ENST00000334490 AKAP2Q9Y2D5 859 aa17.95■□□□□ 0.46
C9orf47-201ENST00000334490 TPM1P09493 284 aa17.95■□□□□ 0.46
C9orf47-201ENST00000334490 TDO2P48775 406 aa17.94■□□□□ 0.46
C9orf47-201ENST00000334490 SNRPA1P09661 255 aaKnown RBP17.94■□□□□ 0.46
C9orf47-201ENST00000334490 CCAR1Q8IX12 1150 aaKnown RBP17.94■□□□□ 0.46
C9orf47-201ENST00000334490 AK7Q96M32 723 aa17.94■□□□□ 0.46
C9orf47-201ENST00000334490 PDCP20941 246 aa17.93■□□□□ 0.46
C9orf47-201ENST00000334490 ANKRD20A12PQ8NF67 263 aa17.93■□□□□ 0.46
C9orf47-201ENST00000334490 PBRM1Q86U86 1689 aa17.93■□□□□ 0.46
C9orf47-201ENST00000334490 ANXA1P04083 346 aa17.93■□□□□ 0.46
C9orf47-201ENST00000334490 NOC3LQ8WTT2 800 aaKnown RBP17.93■□□□□ 0.46
C9orf47-201ENST00000334490 LRRFIP2Q9Y608 721 aaKnown RBP17.93■□□□□ 0.46
C9orf47-201ENST00000334490 NKTRP30414 1462 aaKnown RBP17.93■□□□□ 0.46
C9orf47-201ENST00000334490 AEBP1Q8IUX7 1158 aa17.93■□□□□ 0.46
C9orf47-201ENST00000334490 BCL11BQ9C0K0 894 aaPredicted RBP17.93■□□□□ 0.46
C9orf47-201ENST00000334490 POLKQ9UBT6 870 aa17.93■□□□□ 0.46
C9orf47-201ENST00000334490 ATP5J2-PTCD1G3V325 749 aa17.92■□□□□ 0.46
C9orf47-201ENST00000334490 GCP02774 474 aa17.92■□□□□ 0.46
C9orf47-201ENST00000334490 PCMTD1Q96MG8 357 aaPredicted RBP17.92■□□□□ 0.46
C9orf47-201ENST00000334490 ANKIB1Q9P2G1 1089 aa17.92■□□□□ 0.46
C9orf47-201ENST00000334490 CAVIN4Q5BKX8 364 aa17.92■□□□□ 0.46
C9orf47-201ENST00000334490 LRRC59Q96AG4 307 aaKnown RBP17.92■□□□□ 0.46
C9orf47-201ENST00000334490 EIF4A2Q14240 407 aaKnown RBP17.92■□□□□ 0.46
C9orf47-201ENST00000334490 ABCA5Q8WWZ7 1642 aa17.92■□□□□ 0.46
C9orf47-201ENST00000334490 PI4KAP2A4QPH2 592 aa17.92■□□□□ 0.46
C9orf47-201ENST00000334490 C20orf194Q5TEA3 1177 aa17.92■□□□□ 0.46
C9orf47-201ENST00000334490 PI4KAP1Q8N8J0 262 aa17.92■□□□□ 0.46
C9orf47-201ENST00000334490 CTNNA3Q9UI47 895 aa17.92■□□□□ 0.46
C9orf47-201ENST00000334490 MAP3K2Q9Y2U5 619 aa17.92■□□□□ 0.46
C9orf47-201ENST00000334490 RAB11FIP3O75154 756 aa17.91■□□□□ 0.46
C9orf47-201ENST00000334490 ACSBG1Q96GR2 724 aa17.91■□□□□ 0.46
C9orf47-201ENST00000334490 PUS7Q96PZ0 661 aaKnown RBP17.91■□□□□ 0.46
C9orf47-201ENST00000334490 DDB1Q16531 1140 aa17.91■□□□□ 0.46
C9orf47-201ENST00000334490 TESK2Q96S53 571 aa17.91■□□□□ 0.46
C9orf47-201ENST00000334490 SMARCA5O60264 1052 aaPredicted RBP17.91■□□□□ 0.46
C9orf47-201ENST00000334490 GLRX3O76003 335 aaKnown RBP17.91■□□□□ 0.46
C9orf47-201ENST00000334490 STK3Q13188 491 aa17.91■□□□□ 0.46
C9orf47-201ENST00000334490 TRIM27P14373 513 aa17.91■□□□□ 0.46
C9orf47-201ENST00000334490 AIDAQ96BJ3 306 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms