RNA–Protein interactions for RNA: ENST00000334478.8

PFDN5-202, Transcript of prefoldin subunit 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN5, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-202ENST00000334478 PLSCR1O15162 318 aa20.58■□□□□ 0.89
PFDN5-202ENST00000334478 AMER1Q5JTC6 1135 aaPredicted RBP20.58■□□□□ 0.89
PFDN5-202ENST00000334478 USHBP1Q8N6Y0 703 aa20.58■□□□□ 0.89
PFDN5-202ENST00000334478 TATP17735 454 aaPredicted RBP20.56■□□□□ 0.88
PFDN5-202ENST00000334478 ZCRB1Q8TBF4 217 aaKnown RBP20.56■□□□□ 0.88
PFDN5-202ENST00000334478 KAT6BQ8WYB5 2073 aa20.55■□□□□ 0.88
PFDN5-202ENST00000334478 PER1O15534 1290 aaPredicted RBP20.55■□□□□ 0.88
PFDN5-202ENST00000334478 DDX54Q8TDD1 881 aaKnown RBP20.55■□□□□ 0.88
PFDN5-202ENST00000334478 LRP5O75197 1615 aa20.54■□□□□ 0.88
PFDN5-202ENST00000334478 PTF1AQ7RTS3 328 aa20.54■□□□□ 0.88
PFDN5-202ENST00000334478 PLEKHG2Q9H7P9 1386 aa20.54■□□□□ 0.88
PFDN5-202ENST00000334478 NPC1L1Q9UHC9 1359 aa20.54■□□□□ 0.88
PFDN5-202ENST00000334478 PCDH11XQ9BZA7 1347 aa20.53■□□□□ 0.88
PFDN5-202ENST00000334478 PCDH11YQ9BZA8 1340 aa20.53■□□□□ 0.88
PFDN5-202ENST00000334478 KCNQ2O43526 872 aa20.52■□□□□ 0.88
PFDN5-202ENST00000334478 EIF4A2Q14240 407 aaKnown RBP20.52■□□□□ 0.88
PFDN5-202ENST00000334478 ACSBG1Q96GR2 724 aa20.52■□□□□ 0.88
PFDN5-202ENST00000334478 EYA1Q99502 592 aa20.51■□□□□ 0.87
PFDN5-202ENST00000334478 NBPF14Q5TI25 921 aa20.5■□□□□ 0.87
PFDN5-202ENST00000334478 IGSF1Q8N6C5 1336 aa20.5■□□□□ 0.87
PFDN5-202ENST00000334478 PSDA5PKW4 1024 aaPredicted RBP20.49■□□□□ 0.87
PFDN5-202ENST00000334478 TOGARAM1Q9Y4F4 1720 aa20.49■□□□□ 0.87
PFDN5-202ENST00000334478 LY75O60449 1722 aa20.48■□□□□ 0.87
PFDN5-202ENST00000334478 R3HDM1Q15032 1099 aaKnown RBP20.48■□□□□ 0.87
PFDN5-202ENST00000334478 SRCAPQ6ZRS2 3230 aa20.48■□□□□ 0.87
PFDN5-202ENST00000334478 PAPPAQ13219 1627 aa20.47■□□□□ 0.87
PFDN5-202ENST00000334478 CC2D1BQ5T0F9 858 aaKnown RBP20.47■□□□□ 0.87
PFDN5-202ENST00000334478 ITGB4P16144 1822 aa20.47■□□□□ 0.87
PFDN5-202ENST00000334478 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.46■□□□□ 0.87
PFDN5-202ENST00000334478 SPG7Q9UQ90 795 aa20.46■□□□□ 0.87
PFDN5-202ENST00000334478 TXNRD1Q16881 649 aa20.45■□□□□ 0.86
PFDN5-202ENST00000334478 PROM2Q8N271 834 aa20.44■□□□□ 0.86
PFDN5-202ENST00000334478 SYTL4Q96C24 671 aaPredicted RBP20.44■□□□□ 0.86
PFDN5-202ENST00000334478 CYP27B1O15528 508 aa20.43■□□□□ 0.86
PFDN5-202ENST00000334478 CASZ1Q86V15 1759 aa20.43■□□□□ 0.86
PFDN5-202ENST00000334478 PRIM1P49642 420 aaKnown RBP20.42■□□□□ 0.86
PFDN5-202ENST00000334478 MTHFSP49914 203 aa20.41■□□□□ 0.86
PFDN5-202ENST00000334478 KDRP35968 1356 aa20.41■□□□□ 0.86
PFDN5-202ENST00000334478 NKX1-1Q15270 411 aaPredicted RBP20.4■□□□□ 0.86
PFDN5-202ENST00000334478 QSER1Q2KHR3 1735 aa20.4■□□□□ 0.86
PFDN5-202ENST00000334478 ANO8Q9HCE9 1232 aaPredicted RBP20.4■□□□□ 0.86
PFDN5-202ENST00000334478 IL13P35225 146 aa20.39■□□□□ 0.85
PFDN5-202ENST00000334478 COL3A1P02461 1466 aaPredicted RBP20.38■□□□□ 0.85
PFDN5-202ENST00000334478 SLC27A3Q5K4L6 730 aa20.38■□□□□ 0.85
PFDN5-202ENST00000334478 IFNL2Q8IZJ0 200 aa20.38■□□□□ 0.85
PFDN5-202ENST00000334478 STK32BQ9NY57 414 aa20.37■□□□□ 0.85
PFDN5-202ENST00000334478 C5P01031 1676 aa20.36■□□□□ 0.85
PFDN5-202ENST00000334478 PHKG2P15735 406 aa20.36■□□□□ 0.85
PFDN5-202ENST00000334478 TAF1LQ8IZX4 1826 aa20.35■□□□□ 0.85
PFDN5-202ENST00000334478 AMOTQ4VCS5 1084 aa20.35■□□□□ 0.85
PFDN5-202ENST00000334478 PLEKHO1Q53GL0 409 aaPredicted RBP20.35■□□□□ 0.85
PFDN5-202ENST00000334478 SULT6B1Q6IMI4 303 aa20.35■□□□□ 0.85
PFDN5-202ENST00000334478 AEBP1Q8IUX7 1158 aa20.35■□□□□ 0.85
PFDN5-202ENST00000334478 TUBGCP6Q96RT7 1819 aa20.34■□□□□ 0.85
PFDN5-202ENST00000334478 DIAPH1O60610 1272 aaKnown RBP20.34■□□□□ 0.85
PFDN5-202ENST00000334478 CNGB1Q14028 1251 aaPredicted RBP20.34■□□□□ 0.85
PFDN5-202ENST00000334478 SLC15A2Q16348 729 aa20.34■□□□□ 0.85
PFDN5-202ENST00000334478 VIRMAQ69YN4 1812 aaKnown RBP20.34■□□□□ 0.85
PFDN5-202ENST00000334478 LRRC4BQ9NT99 713 aa20.33■□□□□ 0.85
PFDN5-202ENST00000334478 SCN11AQ9UI33 1791 aa20.32■□□□□ 0.84
PFDN5-202ENST00000334478 HSP90AB1P08238 724 aaKnown RBP20.32■□□□□ 0.84
PFDN5-202ENST00000334478 MPRIPQ6WCQ1 1025 aa20.32■□□□□ 0.84
PFDN5-202ENST00000334478 PALLDQ8WX93 1383 aa20.32■□□□□ 0.84
PFDN5-202ENST00000334478 ZNF530Q6P9A1 599 aaPredicted RBP20.31■□□□□ 0.84
PFDN5-202ENST00000334478 HMGB2P26583 209 aaKnown RBP20.3■□□□□ 0.84
PFDN5-202ENST00000334478 SMARCC1Q92922 1105 aaPredicted RBP20.3■□□□□ 0.84
PFDN5-202ENST00000334478 DCAF5Q96JK2 942 aa20.3■□□□□ 0.84
PFDN5-202ENST00000334478 CCNL1Q9UK58 526 aaPredicted RBP20.3■□□□□ 0.84
PFDN5-202ENST00000334478 C1orf141Q5JVX7 400 aa20.29■□□□□ 0.84
PFDN5-202ENST00000334478 CFAP53Q96M91 514 aa20.29■□□□□ 0.84
PFDN5-202ENST00000334478 TMOD3Q9NYL9 352 aa20.29■□□□□ 0.84
PFDN5-202ENST00000334478 KDM6AO15550 1401 aaPredicted RBP20.28■□□□□ 0.84
PFDN5-202ENST00000334478 ZNF827Q17R98 1081 aa20.28■□□□□ 0.84
PFDN5-202ENST00000334478 PIGBQ92521 554 aa20.28■□□□□ 0.84
PFDN5-202ENST00000334478 ZNF831Q5JPB2 1677 aa20.28■□□□□ 0.84
PFDN5-202ENST00000334478 ZEB1P37275 1124 aaPredicted RBP20.27■□□□□ 0.84
PFDN5-202ENST00000334478 AKT1S1Q96B36 256 aa20.27■□□□□ 0.84
PFDN5-202ENST00000334478 SPON1Q9HCB6 807 aa20.27■□□□□ 0.84
PFDN5-202ENST00000334478 ADAMTS7Q9UKP4 1686 aa20.26■□□□□ 0.83
PFDN5-202ENST00000334478 ERVV-2B6SEH9 535 aa20.26■□□□□ 0.83
PFDN5-202ENST00000334478 HMOX1P09601 288 aa20.26■□□□□ 0.83
PFDN5-202ENST00000334478 PPP2R1AP30153 589 aa20.26■□□□□ 0.83
PFDN5-202ENST00000334478 C4BP0C0L5 1744 aa20.26■□□□□ 0.83
PFDN5-202ENST00000334478 KCNQ4P56696 695 aa20.24■□□□□ 0.83
PFDN5-202ENST00000334478 COL24A1Q17RW2 1714 aa20.24■□□□□ 0.83
PFDN5-202ENST00000334478 U2SURPO15042 1029 aaKnown RBP20.23■□□□□ 0.83
PFDN5-202ENST00000334478 AKAP4Q5JQC9 854 aa20.23■□□□□ 0.83
PFDN5-202ENST00000334478 PDGFDQ9GZP0 370 aaPredicted RBP20.23■□□□□ 0.83
PFDN5-202ENST00000334478 MRC1P22897 1456 aa20.23■□□□□ 0.83
PFDN5-202ENST00000334478 UBR3Q6ZT12 1888 aa20.22■□□□□ 0.83
PFDN5-202ENST00000334478 COL5A3P25940 1745 aaPredicted RBP20.22■□□□□ 0.83
PFDN5-202ENST00000334478 MTFR1LQ9H019 292 aa20.21■□□□□ 0.83
PFDN5-202ENST00000334478 TFCP2L1Q9NZI6 479 aa20.21■□□□□ 0.83
PFDN5-202ENST00000334478 NUDCQ9Y266 331 aa20.21■□□□□ 0.83
PFDN5-202ENST00000334478 CICQ96RK0 1608 aaPredicted RBP20.2■□□□□ 0.82
PFDN5-202ENST00000334478 ZBTB7AO95365 584 aa20.2■□□□□ 0.82
PFDN5-202ENST00000334478 CABP4P57796 275 aa20.2■□□□□ 0.82
PFDN5-202ENST00000334478 ASAP1Q9ULH1 1129 aa20.2■□□□□ 0.82
PFDN5-202ENST00000334478 PNPLA7Q6ZV29 1317 aa20.2■□□□□ 0.82
PFDN5-202ENST00000334478 LOC102724428A0A0B4J2F2 783 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms