RNA–Protein interactions for RNA: ENST00000334256.8

KPNA4-201, Transcript of karyopherin subunit alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA4, Length 8,981 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4-201ENST00000334256 USP8P40818 1118 aa14.87□□□□□ -0.03
KPNA4-201ENST00000334256 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.87□□□□□ -0.03
KPNA4-201ENST00000334256 CENPJQ9HC77 1338 aaPredicted RBP14.87□□□□□ -0.03
KPNA4-201ENST00000334256 CUL5Q93034 780 aa14.87□□□□□ -0.03
KPNA4-201ENST00000334256 TERF1P54274 439 aa14.87□□□□□ -0.03
KPNA4-201ENST00000334256 SEC63Q9UGP8 760 aaKnown RBP14.87□□□□□ -0.03
KPNA4-201ENST00000334256 CCDC66A2RUB6 948 aa14.87□□□□□ -0.03
KPNA4-201ENST00000334256 ST20-MTHFSA0A0A6YYL1 179 aa14.86□□□□□ -0.03
KPNA4-201ENST00000334256 CCDC160A6NGH7 325 aa14.86□□□□□ -0.03
KPNA4-201ENST00000334256 MTHFSP49914 203 aa14.86□□□□□ -0.03
KPNA4-201ENST00000334256 MPHOSPH6Q99547 160 aaKnown RBP14.86□□□□□ -0.03
KPNA4-201ENST00000334256 PRPF31Q8WWY3 499 aaKnown RBP14.86□□□□□ -0.03
KPNA4-201ENST00000334256 PRC1O43663 620 aa14.86□□□□□ -0.03
KPNA4-201ENST00000334256 GNL1P36915 607 aaPredicted RBP14.86□□□□□ -0.03
KPNA4-201ENST00000334256 HDAC9Q9UKV0 1011 aa14.86□□□□□ -0.03
KPNA4-201ENST00000334256 CGNL1Q0VF96 1302 aa14.85□□□□□ -0.03
KPNA4-201ENST00000334256 SMARCE1Q969G3 411 aa14.85□□□□□ -0.03
KPNA4-201ENST00000334256 SP4Q02446 784 aa14.85□□□□□ -0.03
KPNA4-201ENST00000334256 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.85□□□□□ -0.035e-7■■■■■ 29.8
KPNA4-201ENST00000334256 CCDC91Q7Z6B0 441 aa14.84□□□□□ -0.03
KPNA4-201ENST00000334256 GINS2Q9Y248 185 aa14.84□□□□□ -0.03
KPNA4-201ENST00000334256 EIF3AQ14152 1382 aaKnown RBP14.84□□□□□ -0.03
KPNA4-201ENST00000334256 IDH1O75874 414 aaKnown RBP14.84□□□□□ -0.03
KPNA4-201ENST00000334256 CNGA1P29973 690 aa14.84□□□□□ -0.03
KPNA4-201ENST00000334256 BMS1Q14692 1282 aaKnown RBP14.84□□□□□ -0.03
KPNA4-201ENST00000334256 UBTFL1P0CB47 393 aaPredicted RBP14.84□□□□□ -0.03
KPNA4-201ENST00000334256 CCDC89Q8N998 374 aa14.84□□□□□ -0.03
KPNA4-201ENST00000334256 NACAP1Q9BZK3 213 aa14.84□□□□□ -0.03
KPNA4-201ENST00000334256 ZNF652Q9Y2D9 606 aa14.84□□□□□ -0.03
KPNA4-201ENST00000334256 NDC80O14777 642 aa14.84□□□□□ -0.03
KPNA4-201ENST00000334256 ERC2O15083 957 aa14.84□□□□□ -0.03
KPNA4-201ENST00000334256 RIPK4P57078 832 aa14.84□□□□□ -0.03
KPNA4-201ENST00000334256 SYNCQ9H7C4 482 aa14.84□□□□□ -0.03
KPNA4-201ENST00000334256 EIF3JO75822 258 aaKnown RBP14.84□□□□□ -0.03
KPNA4-201ENST00000334256 ACSBG1Q96GR2 724 aa14.84□□□□□ -0.03
KPNA4-201ENST00000334256 NACA2Q9H009 215 aa14.84□□□□□ -0.03
KPNA4-201ENST00000334256 NUP155O75694 1391 aa14.84□□□□□ -0.03
KPNA4-201ENST00000334256 TIGD1Q96MW7 591 aa14.83□□□□□ -0.03
KPNA4-201ENST00000334256 PPM1EQ8WY54 764 aa14.83□□□□□ -0.04
KPNA4-201ENST00000334256 GSTTP1A0A1W2PQM5 241 aa14.83□□□□□ -0.04
KPNA4-201ENST00000334256 FNDC3AQ9Y2H6 1198 aaKnown RBP14.83□□□□□ -0.04
KPNA4-201ENST00000334256 STIM1Q13586 685 aa14.83□□□□□ -0.04
KPNA4-201ENST00000334256 AKNAD1Q5T1N1 836 aa14.83□□□□□ -0.04
KPNA4-201ENST00000334256 LRRCC1Q9C099 1032 aa14.82□□□□□ -0.04
KPNA4-201ENST00000334256 ARID5AQ03989 594 aa14.82□□□□□ -0.04
KPNA4-201ENST00000334256 SPATA24Q86W54 205 aa14.82□□□□□ -0.04
KPNA4-201ENST00000334256 FERP16591 822 aa14.82□□□□□ -0.04
KPNA4-201ENST00000334256 CEP83Q9Y592 693 aa14.82□□□□□ -0.04
KPNA4-201ENST00000334256 SERPINC1P01008 464 aa14.82□□□□□ -0.04
KPNA4-201ENST00000334256 LARP1Q6PKG0 1096 aaKnown RBP14.82□□□□□ -0.04
KPNA4-201ENST00000334256 GPHNQ9NQX3 736 aaPredicted RBP14.82□□□□□ -0.04
KPNA4-201ENST00000334256 CCDC82Q8N4S0 544 aa14.81□□□□□ -0.04
KPNA4-201ENST00000334256 ODF2LQ9ULJ1 636 aa14.81□□□□□ -0.04
KPNA4-201ENST00000334256 MAP10Q9P2G4 905 aa14.81□□□□□ -0.04
KPNA4-201ENST00000334256 C11orf95C9JLR9 678 aaPredicted RBP14.81□□□□□ -0.04
KPNA4-201ENST00000334256 XRCC6P12956 609 aaKnown RBP eCLIP14.81□□□□□ -0.04
KPNA4-201ENST00000334256 ZNF444Q8N0Y2 327 aaPredicted RBP14.81□□□□□ -0.04
KPNA4-201ENST00000334256 PRKAG2Q9UGJ0 569 aa14.81□□□□□ -0.04
KPNA4-201ENST00000334256 TTC36A6NLP5 189 aa14.81□□□□□ -0.04
KPNA4-201ENST00000334256 UBAC1Q9BSL1 405 aa14.81□□□□□ -0.04
KPNA4-201ENST00000334256 EVC2Q86UK5 1308 aa14.81□□□□□ -0.04
KPNA4-201ENST00000334256 HOOK3Q86VS8 718 aa14.8□□□□□ -0.04
KPNA4-201ENST00000334256 PLEKHO1Q53GL0 409 aaPredicted RBP14.8□□□□□ -0.04
KPNA4-201ENST00000334256 CAVIN4Q5BKX8 364 aa14.8□□□□□ -0.04
KPNA4-201ENST00000334256 FAM200AQ8TCP9 573 aa14.8□□□□□ -0.04
KPNA4-201ENST00000334256 SYCP3Q8IZU3 236 aa14.8□□□□□ -0.04
KPNA4-201ENST00000334256 BANK1Q8NDB2 785 aa14.8□□□□□ -0.04
KPNA4-201ENST00000334256 NCBP1Q09161 790 aaKnown RBP14.8□□□□□ -0.04
KPNA4-201ENST00000334256 PPP2R5CQ13362 524 aa14.8□□□□□ -0.04
KPNA4-201ENST00000334256 IFNLR1Q8IU57 520 aaPredicted RBP14.8□□□□□ -0.04
KPNA4-201ENST00000334256 CETN2P41208 172 aa14.79□□□□□ -0.04
KPNA4-201ENST00000334256 OGFOD1Q8N543 542 aa14.79□□□□□ -0.04
KPNA4-201ENST00000334256 PSMC4P43686 418 aa14.79□□□□□ -0.04
KPNA4-201ENST00000334256 GABPAQ06546 454 aa14.79□□□□□ -0.04
KPNA4-201ENST00000334256 CDCA7Q9BWT1 371 aaPredicted RBP14.79□□□□□ -0.04
KPNA4-201ENST00000334256 CAVIN1Q6NZI2 390 aaKnown RBP14.79□□□□□ -0.04
KPNA4-201ENST00000334256 SURF6O75683 361 aaKnown RBP14.78□□□□□ -0.04
KPNA4-201ENST00000334256 ANO3Q9BYT9 981 aa14.78□□□□□ -0.04
KPNA4-201ENST00000334256 TSHZ2Q9NRE2 1034 aa14.78□□□□□ -0.04
KPNA4-201ENST00000334256 SKOR2Q2VWA4 1001 aaPredicted RBP14.78□□□□□ -0.04
KPNA4-201ENST00000334256 TSNARE1Q96NA8 513 aa14.78□□□□□ -0.04
KPNA4-201ENST00000334256 DIAPH1O60610 1272 aaKnown RBP14.77□□□□□ -0.04
KPNA4-201ENST00000334256 ABL1P00519 1130 aa14.77□□□□□ -0.04
KPNA4-201ENST00000334256 PPP1R9BQ96SB3 815 aa14.77□□□□□ -0.04
KPNA4-201ENST00000334256 STARD3NLO95772 234 aa14.77□□□□□ -0.04
KPNA4-201ENST00000334256 NASPP49321 788 aaPredicted RBP14.77□□□□□ -0.04
KPNA4-201ENST00000334256 SATB1Q01826 763 aa14.77□□□□□ -0.04
KPNA4-201ENST00000334256 CENPQQ7L2Z9 268 aaPredicted RBP14.77□□□□□ -0.04
KPNA4-201ENST00000334256 TFCP2L1Q9NZI6 479 aa14.77□□□□□ -0.04
KPNA4-201ENST00000334256 ALS2CR12Q96Q35 445 aa14.77□□□□□ -0.05
KPNA4-201ENST00000334256 NAT10Q9H0A0 1025 aaKnown RBP14.76□□□□□ -0.05
KPNA4-201ENST00000334256 SMG6Q86US8 1419 aaKnown RBP14.76□□□□□ -0.05
KPNA4-201ENST00000334256 PPFIA1Q13136 1202 aa14.76□□□□□ -0.05
KPNA4-201ENST00000334256 COG6Q9Y2V7 657 aa14.76□□□□□ -0.05
KPNA4-201ENST00000334256 FCHSD2O94868 740 aa14.76□□□□□ -0.05
KPNA4-201ENST00000334256 CABP5Q9NP86 173 aa14.76□□□□□ -0.05
KPNA4-201ENST00000334256 ZBTB21Q9ULJ3 1066 aa14.76□□□□□ -0.05
KPNA4-201ENST00000334256 SPG7Q9UQ90 795 aa14.76□□□□□ -0.05
KPNA4-201ENST00000334256 GIGYF2Q6Y7W6 1299 aaKnown RBP14.76□□□□□ -0.05
KPNA4-201ENST00000334256 CARMIL2Q6F5E8 1435 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms