RNA–Protein interactions for RNA: ENST00000332682.8

TRIM49B-201, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-201ENST00000332682 TRMT2AQ8IZ69 625 aaKnown RBP15.82■□□□□ 0.12
TRIM49B-201ENST00000332682 CARD10Q9BWT7 1032 aa15.82■□□□□ 0.12
TRIM49B-201ENST00000332682 E9PSI1 815 aa15.81■□□□□ 0.12
TRIM49B-201ENST00000332682 DUSP27Q5VZP5 1158 aa15.81■□□□□ 0.12
TRIM49B-201ENST00000332682 RAPGEF4Q8WZA2 1011 aa15.81■□□□□ 0.12
TRIM49B-201ENST00000332682 LRRC37A3O60309 1634 aa15.81■□□□□ 0.12
TRIM49B-201ENST00000332682 OVOS2A0A0G2JMS6 1433 aa15.81■□□□□ 0.12
TRIM49B-201ENST00000332682 AMOTQ4VCS5 1084 aa15.8■□□□□ 0.12
TRIM49B-201ENST00000332682 THUMPD2Q9BTF0 503 aaKnown RBP15.8■□□□□ 0.12
TRIM49B-201ENST00000332682 IL16Q14005 1332 aa15.8■□□□□ 0.12
TRIM49B-201ENST00000332682 MAP3K5Q99683 1374 aa15.8■□□□□ 0.12
TRIM49B-201ENST00000332682 WNK3Q9BYP7 1800 aa15.79■□□□□ 0.12
TRIM49B-201ENST00000332682 PLEKHO1Q53GL0 409 aaPredicted RBP15.79■□□□□ 0.12
TRIM49B-201ENST00000332682 TATP17735 454 aaPredicted RBP15.78■□□□□ 0.12
TRIM49B-201ENST00000332682 DCTN1Q14203 1278 aa15.78■□□□□ 0.12
TRIM49B-201ENST00000332682 GNAT3A8MTJ3 354 aa15.78■□□□□ 0.12
TRIM49B-201ENST00000332682 ZNF530Q6P9A1 599 aaPredicted RBP15.78■□□□□ 0.12
TRIM49B-201ENST00000332682 MCM10Q7L590 875 aa15.78■□□□□ 0.12
TRIM49B-201ENST00000332682 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.77■□□□□ 0.12
TRIM49B-201ENST00000332682 HTATSF1O43719 755 aaKnown RBP15.77■□□□□ 0.11
TRIM49B-201ENST00000332682 CALD1Q05682 793 aaKnown RBP15.77■□□□□ 0.11
TRIM49B-201ENST00000332682 C8orf37Q96NL8 207 aa15.77■□□□□ 0.11
TRIM49B-201ENST00000332682 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.77■□□□□ 0.11
TRIM49B-201ENST00000332682 VIRMAQ69YN4 1812 aaKnown RBP15.76■□□□□ 0.11
TRIM49B-201ENST00000332682 SHANK3Q9BYB0 1731 aa15.76■□□□□ 0.11
TRIM49B-201ENST00000332682 ADAMTS7Q9UKP4 1686 aa15.76■□□□□ 0.11
TRIM49B-201ENST00000332682 BCL9LQ86UU0 1499 aa15.76■□□□□ 0.11
TRIM49B-201ENST00000332682 DISP2A7MBM2 1401 aa15.76■□□□□ 0.11
TRIM49B-201ENST00000332682 IL2RBP14784 551 aa15.76■□□□□ 0.11
TRIM49B-201ENST00000332682 MYH16Q9H6N6 1097 aa15.76■□□□□ 0.11
TRIM49B-201ENST00000332682 FANCIQ9NVI1 1328 aa15.75■□□□□ 0.11
TRIM49B-201ENST00000332682 AKAP4Q5JQC9 854 aa15.75■□□□□ 0.11
TRIM49B-201ENST00000332682 RTF1Q92541 710 aaKnown RBP15.75■□□□□ 0.11
TRIM49B-201ENST00000332682 NGLY1Q96IV0 654 aa15.75■□□□□ 0.11
TRIM49B-201ENST00000332682 USP35Q9P2H5 1018 aa15.75■□□□□ 0.11
TRIM49B-201ENST00000332682 CEMIPQ8WUJ3 1361 aa15.75■□□□□ 0.11
TRIM49B-201ENST00000332682 FNBP4Q8N3X1 1017 aaPredicted RBP15.74■□□□□ 0.11
TRIM49B-201ENST00000332682 IFT57Q9NWB7 429 aa15.74■□□□□ 0.11
TRIM49B-201ENST00000332682 SPG7Q9UQ90 795 aa15.74■□□□□ 0.11
TRIM49B-201ENST00000332682 SPATA31A1Q5TZJ5 1347 aa15.74■□□□□ 0.11
TRIM49B-201ENST00000332682 ZNF853P0CG23 659 aa15.73■□□□□ 0.11
TRIM49B-201ENST00000332682 C1orf141Q5JVX7 400 aa15.73■□□□□ 0.11
TRIM49B-201ENST00000332682 UNC5CLQ8IV45 518 aa15.73■□□□□ 0.11
TRIM49B-201ENST00000332682 TSR2Q969E8 191 aaKnown RBP15.73■□□□□ 0.11
TRIM49B-201ENST00000332682 SPATA31A5Q5VU36 1347 aa15.73■□□□□ 0.11
TRIM49B-201ENST00000332682 SPATA31A7Q8IWB4 1347 aa15.73■□□□□ 0.11
TRIM49B-201ENST00000332682 IL17REQ8NFR9 667 aa15.73■□□□□ 0.11
TRIM49B-201ENST00000332682 CFAP44Q96MT7 982 aa15.73■□□□□ 0.11
TRIM49B-201ENST00000332682 SCN11AQ9UI33 1791 aa15.72■□□□□ 0.11
TRIM49B-201ENST00000332682 GNAI1P63096 354 aa15.72■□□□□ 0.11
TRIM49B-201ENST00000332682 CYP27B1O15528 508 aa15.71■□□□□ 0.11
TRIM49B-201ENST00000332682 PHKG2P15735 406 aa15.71■□□□□ 0.11
TRIM49B-201ENST00000332682 MEX3CQ5U5Q3 659 aaKnown RBP15.71■□□□□ 0.11
TRIM49B-201ENST00000332682 KDM6AO15550 1401 aaPredicted RBP15.71■□□□□ 0.11
TRIM49B-201ENST00000332682 PCDH11XQ9BZA7 1347 aa15.7■□□□□ 0.1
TRIM49B-201ENST00000332682 PCDH11YQ9BZA8 1340 aa15.7■□□□□ 0.1
TRIM49B-201ENST00000332682 IFNL2Q8IZJ0 200 aa15.7■□□□□ 0.1
TRIM49B-201ENST00000332682 ZCRB1Q8TBF4 217 aaKnown RBP15.7■□□□□ 0.1
TRIM49B-201ENST00000332682 MBIPQ9NS73 344 aa15.7■□□□□ 0.1
TRIM49B-201ENST00000332682 RCAN3Q9UKA8 241 aa15.7■□□□□ 0.1
TRIM49B-201ENST00000332682 THRAP3Q9Y2W1 955 aaKnown RBP15.7■□□□□ 0.1
TRIM49B-201ENST00000332682 LAS1LQ9Y4W2 734 aaKnown RBP15.7■□□□□ 0.1
TRIM49B-201ENST00000332682 SIPA1L3O60292 1781 aaPredicted RBP15.7■□□□□ 0.1
TRIM49B-201ENST00000332682 CHL1O00533 1208 aa15.69■□□□□ 0.1
TRIM49B-201ENST00000332682 VPS72Q15906 364 aa15.69■□□□□ 0.1
TRIM49B-201ENST00000332682 MPRIPQ6WCQ1 1025 aa15.69■□□□□ 0.1
TRIM49B-201ENST00000332682 LGR6Q9HBX8 967 aa15.69■□□□□ 0.1
TRIM49B-201ENST00000332682 RNMTO43148 476 aaKnown RBP15.68■□□□□ 0.1
TRIM49B-201ENST00000332682 FBXO41Q8TF61 875 aa15.68■□□□□ 0.1
TRIM49B-201ENST00000332682 USP21Q9UK80 565 aa15.68■□□□□ 0.1
TRIM49B-201ENST00000332682 SUPT16HQ9Y5B9 1047 aaKnown RBP15.68■□□□□ 0.1
TRIM49B-201ENST00000332682 MRC1P22897 1456 aa15.68■□□□□ 0.1
TRIM49B-201ENST00000332682 AFF2P51816 1311 aa15.68■□□□□ 0.1
TRIM49B-201ENST00000332682 TNS2Q63HR2 1409 aa15.68■□□□□ 0.1
TRIM49B-201ENST00000332682 EXOSC9Q06265 439 aaKnown RBP15.68■□□□□ 0.1
TRIM49B-201ENST00000332682 KDM3BQ7LBC6 1761 aa15.67■□□□□ 0.1
TRIM49B-201ENST00000332682 BARGINQ6ZT62 677 aa15.67■□□□□ 0.1
TRIM49B-201ENST00000332682 CDCA7Q9BWT1 371 aaPredicted RBP15.67■□□□□ 0.1
TRIM49B-201ENST00000332682 CCDC9Q9Y3X0 531 aaKnown RBP15.67■□□□□ 0.1
TRIM49B-201ENST00000332682 HSP90AB1P08238 724 aaKnown RBP15.66■□□□□ 0.1
TRIM49B-201ENST00000332682 DCAF5Q96JK2 942 aa15.66■□□□□ 0.1
TRIM49B-201ENST00000332682 RNF123Q5XPI4 1314 aa15.66■□□□□ 0.1
TRIM49B-201ENST00000332682 TOGARAM1Q9Y4F4 1720 aa15.65■□□□□ 0.1
TRIM49B-201ENST00000332682 NKX1-1Q15270 411 aaPredicted RBP15.65■□□□□ 0.1
TRIM49B-201ENST00000332682 TAF7Q15545 349 aaPredicted RBP15.65■□□□□ 0.1
TRIM49B-201ENST00000332682 BABAM1Q9NWV8 329 aa15.65■□□□□ 0.1
TRIM49B-201ENST00000332682 ATRNO75882 1429 aa15.65■□□□□ 0.1
TRIM49B-201ENST00000332682 GLI3P10071 1580 aa15.65■□□□□ 0.1
TRIM49B-201ENST00000332682 CT47B1P0C2W7 299 aaPredicted RBP15.64■□□□□ 0.09
TRIM49B-201ENST00000332682 TEFQ10587 303 aa15.64■□□□□ 0.09
TRIM49B-201ENST00000332682 MIS18AQ9NYP9 233 aa15.64■□□□□ 0.09
TRIM49B-201ENST00000332682 TSPYL4Q9UJ04 414 aa15.64■□□□□ 0.09
TRIM49B-201ENST00000332682 THSD7AQ9UPZ6 1657 aa15.64■□□□□ 0.09
TRIM49B-201ENST00000332682 DDX54Q8TDD1 881 aaKnown RBP15.63■□□□□ 0.09
TRIM49B-201ENST00000332682 SLC52A2Q9HAB3 445 aa15.63■□□□□ 0.09
TRIM49B-201ENST00000332682 EXOC5O00471 708 aa15.62■□□□□ 0.09
TRIM49B-201ENST00000332682 TSPYL6Q8N831 410 aa15.62■□□□□ 0.09
TRIM49B-201ENST00000332682 C8orf58Q8NAV2 365 aa15.62■□□□□ 0.09
TRIM49B-201ENST00000332682 RARSP54136 660 aaKnown RBP15.61■□□□□ 0.09
TRIM49B-201ENST00000332682 DDB1Q16531 1140 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms