RNA–Protein interactions for RNA: ENST00000332598.6

TMED9-201, Transcript of transmembrane p24 trafficking protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMED9, Length 1,473 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED9-201ENST00000332598 PLSCR1O15162 318 aa23.09■■□□□ 1.29
TMED9-201ENST00000332598 EIF4A2Q14240 407 aaKnown RBP23.08■■□□□ 1.29
TMED9-201ENST00000332598 MAP2P11137 1827 aaKnown RBP23.08■■□□□ 1.28
TMED9-201ENST00000332598 TATP17735 454 aaPredicted RBP23.07■■□□□ 1.28
TMED9-201ENST00000332598 CC2D1BQ5T0F9 858 aaKnown RBP23.07■■□□□ 1.28
TMED9-201ENST00000332598 SBF2Q86WG5 1849 aa23.06■■□□□ 1.28
TMED9-201ENST00000332598 SRCAPQ6ZRS2 3230 aa23.05■■□□□ 1.28
TMED9-201ENST00000332598 CNGB1Q14028 1251 aaPredicted RBP23.05■■□□□ 1.28
TMED9-201ENST00000332598 R3HDM1Q15032 1099 aaKnown RBP23.05■■□□□ 1.28
TMED9-201ENST00000332598 PROM2Q8N271 834 aa23.05■■□□□ 1.28
TMED9-201ENST00000332598 NCAPD2Q15021 1401 aa23.02■■□□□ 1.28
TMED9-201ENST00000332598 PRIM1P49642 420 aaKnown RBP23.01■■□□□ 1.27
TMED9-201ENST00000332598 SYTL4Q96C24 671 aaPredicted RBP23■■□□□ 1.27
TMED9-201ENST00000332598 CYP27B1O15528 508 aa22.99■■□□□ 1.27
TMED9-201ENST00000332598 MTHFSP49914 203 aa22.99■■□□□ 1.27
TMED9-201ENST00000332598 TXNRD1Q16881 649 aa22.99■■□□□ 1.27
TMED9-201ENST00000332598 NBPF14Q5TI25 921 aa22.98■■□□□ 1.27
TMED9-201ENST00000332598 IGSF1Q8N6C5 1336 aa22.98■■□□□ 1.27
TMED9-201ENST00000332598 PCDH11XQ9BZA7 1347 aa22.98■■□□□ 1.27
TMED9-201ENST00000332598 PCDH11YQ9BZA8 1340 aa22.98■■□□□ 1.27
TMED9-201ENST00000332598 NHSQ6T4R5 1651 aa22.98■■□□□ 1.27
TMED9-201ENST00000332598 RREB1Q92766 1687 aa22.98■■□□□ 1.27
TMED9-201ENST00000332598 NPC1L1Q9UHC9 1359 aa22.97■■□□□ 1.27
TMED9-201ENST00000332598 SHANK3Q9BYB0 1731 aa22.97■■□□□ 1.27
TMED9-201ENST00000332598 SPG7Q9UQ90 795 aa22.96■■□□□ 1.27
TMED9-201ENST00000332598 ANO8Q9HCE9 1232 aaPredicted RBP22.95■■□□□ 1.26
TMED9-201ENST00000332598 NUP188Q5SRE5 1749 aa22.95■■□□□ 1.26
TMED9-201ENST00000332598 IL13P35225 146 aa22.94■■□□□ 1.26
TMED9-201ENST00000332598 AEBP1Q8IUX7 1158 aa22.93■■□□□ 1.26
TMED9-201ENST00000332598 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.93■■□□□ 1.26
TMED9-201ENST00000332598 RGPD3A6NKT7 1758 aaPredicted RBP22.92■■□□□ 1.26
TMED9-201ENST00000332598 RGPD4Q7Z3J3 1758 aa22.92■■□□□ 1.26
TMED9-201ENST00000332598 SULT6B1Q6IMI4 303 aa22.91■■□□□ 1.26
TMED9-201ENST00000332598 LRRC4BQ9NT99 713 aa22.91■■□□□ 1.26
TMED9-201ENST00000332598 NKX1-1Q15270 411 aaPredicted RBP22.9■■□□□ 1.26
TMED9-201ENST00000332598 BTAF1O14981 1849 aa22.89■■□□□ 1.26
TMED9-201ENST00000332598 PHKG2P15735 406 aa22.88■■□□□ 1.25
TMED9-201ENST00000332598 KCNQ4P56696 695 aa22.88■■□□□ 1.25
TMED9-201ENST00000332598 IFNL2Q8IZJ0 200 aa22.88■■□□□ 1.25
TMED9-201ENST00000332598 DOT1LQ8TEK3 1739 aa22.88■■□□□ 1.25
TMED9-201ENST00000332598 PKD1L3Q7Z443 1732 aa22.87■■□□□ 1.25
TMED9-201ENST00000332598 MPRIPQ6WCQ1 1025 aa22.87■■□□□ 1.25
TMED9-201ENST00000332598 KAT6BQ8WYB5 2073 aa22.87■■□□□ 1.25
TMED9-201ENST00000332598 DIAPH1O60610 1272 aaKnown RBP22.86■■□□□ 1.25
TMED9-201ENST00000332598 PLEKHO1Q53GL0 409 aaPredicted RBP22.85■■□□□ 1.25
TMED9-201ENST00000332598 PDGFDQ9GZP0 370 aaPredicted RBP22.85■■□□□ 1.25
TMED9-201ENST00000332598 SLC15A2Q16348 729 aa22.85■■□□□ 1.25
TMED9-201ENST00000332598 STK32BQ9NY57 414 aa22.85■■□□□ 1.25
TMED9-201ENST00000332598 KDRP35968 1356 aa22.84■■□□□ 1.25
TMED9-201ENST00000332598 HMOX1P09601 288 aa22.84■■□□□ 1.25
TMED9-201ENST00000332598 SLC27A3Q5K4L6 730 aa22.84■■□□□ 1.25
TMED9-201ENST00000332598 PLEKHG2Q9H7P9 1386 aa22.84■■□□□ 1.25
TMED9-201ENST00000332598 AMOTQ4VCS5 1084 aa22.83■■□□□ 1.25
TMED9-201ENST00000332598 PIGBQ92521 554 aa22.83■■□□□ 1.25
TMED9-201ENST00000332598 ZNF530Q6P9A1 599 aaPredicted RBP22.82■■□□□ 1.24
TMED9-201ENST00000332598 ZNF827Q17R98 1081 aa22.81■■□□□ 1.24
TMED9-201ENST00000332598 PPP2R1AP30153 589 aa22.8■■□□□ 1.24
TMED9-201ENST00000332598 CCNL1Q9UK58 526 aaPredicted RBP22.79■■□□□ 1.24
TMED9-201ENST00000332598 TOGARAM1Q9Y4F4 1720 aa22.79■■□□□ 1.24
TMED9-201ENST00000332598 TMOD3Q9NYL9 352 aa22.79■■□□□ 1.24
TMED9-201ENST00000332598 COL3A1P02461 1466 aaPredicted RBP22.78■■□□□ 1.24
TMED9-201ENST00000332598 U2SURPO15042 1029 aaKnown RBP22.78■■□□□ 1.24
TMED9-201ENST00000332598 AKT1S1Q96B36 256 aa22.78■■□□□ 1.24
TMED9-201ENST00000332598 DCAF5Q96JK2 942 aa22.78■■□□□ 1.24
TMED9-201ENST00000332598 PALLDQ8WX93 1383 aa22.77■■□□□ 1.24
TMED9-201ENST00000332598 DDX10Q13206 875 aaKnown RBP22.77■■□□□ 1.24
TMED9-201ENST00000332598 C1orf141Q5JVX7 400 aa22.77■■□□□ 1.24
TMED9-201ENST00000332598 HSP90AB1P08238 724 aaKnown RBP22.76■■□□□ 1.23
TMED9-201ENST00000332598 ASAP1Q9ULH1 1129 aa22.76■■□□□ 1.23
TMED9-201ENST00000332598 LRP5O75197 1615 aa22.75■■□□□ 1.23
TMED9-201ENST00000332598 PAPPAQ13219 1627 aa22.75■■□□□ 1.23
TMED9-201ENST00000332598 ZBTB7AO95365 584 aa22.75■■□□□ 1.23
TMED9-201ENST00000332598 SMARCC1Q92922 1105 aaPredicted RBP22.75■■□□□ 1.23
TMED9-201ENST00000332598 CFAP53Q96M91 514 aa22.75■■□□□ 1.23
TMED9-201ENST00000332598 SPON1Q9HCB6 807 aa22.75■■□□□ 1.23
TMED9-201ENST00000332598 ERVV-2B6SEH9 535 aa22.74■■□□□ 1.23
TMED9-201ENST00000332598 KDM6AO15550 1401 aaPredicted RBP22.74■■□□□ 1.23
TMED9-201ENST00000332598 DIEXFQ68CQ4 756 aaKnown RBP22.73■■□□□ 1.23
TMED9-201ENST00000332598 LY75O60449 1722 aa22.73■■□□□ 1.23
TMED9-201ENST00000332598 ATG3Q9NT62 314 aa22.73■■□□□ 1.23
TMED9-201ENST00000332598 TFCP2L1Q9NZI6 479 aa22.73■■□□□ 1.23
TMED9-201ENST00000332598 CABP4P57796 275 aa22.72■■□□□ 1.23
TMED9-201ENST00000332598 MTHFSDQ2M296 383 aaKnown RBP22.72■■□□□ 1.23
TMED9-201ENST00000332598 ATF5Q9Y2D1 282 aaPredicted RBP22.72■■□□□ 1.23
TMED9-201ENST00000332598 AKAP4Q5JQC9 854 aa22.71■■□□□ 1.23
TMED9-201ENST00000332598 ITGB4P16144 1822 aa22.71■■□□□ 1.23
TMED9-201ENST00000332598 LOC102724428A0A0B4J2F2 783 aa22.69■■□□□ 1.22
TMED9-201ENST00000332598 SIK1P57059 783 aa22.69■■□□□ 1.22
TMED9-201ENST00000332598 NFATC2IPQ8NCF5 419 aa22.69■■□□□ 1.22
TMED9-201ENST00000332598 LGR6Q9HBX8 967 aa22.69■■□□□ 1.22
TMED9-201ENST00000332598 CASZ1Q86V15 1759 aa22.69■■□□□ 1.22
TMED9-201ENST00000332598 PNPLA7Q6ZV29 1317 aa22.68■■□□□ 1.22
TMED9-201ENST00000332598 NUDCQ9Y266 331 aa22.68■■□□□ 1.22
TMED9-201ENST00000332598 MTFR1LQ9H019 292 aa22.66■■□□□ 1.22
TMED9-201ENST00000332598 U2AF1L5P0DN76 240 aaPredicted RBP22.66■■□□□ 1.22
TMED9-201ENST00000332598 PTGER2P43116 358 aa22.66■■□□□ 1.22
TMED9-201ENST00000332598 U2AF1Q01081 240 aaKnown RBP eCLIP22.66■■□□□ 1.22
TMED9-201ENST00000332598 RSPH6AQ9H0K4 717 aa22.66■■□□□ 1.22
TMED9-201ENST00000332598 RNMTO43148 476 aaKnown RBP22.65■■□□□ 1.22
TMED9-201ENST00000332598 PRKAR2BP31323 418 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms