RNA–Protein interactions for RNA: ENST00000329758.5

TRIM49-201, Transcript of tripartite motif containing 49, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM49, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-201ENST00000329758 SLFN14P0C7P3 912 aa9.15□□□□□ -0.94
TRIM49-201ENST00000329758 ZSCAN23Q3MJ62 389 aa9.15□□□□□ -0.94
TRIM49-201ENST00000329758 RBSNQ9H1K0 784 aa9.15□□□□□ -0.94
TRIM49-201ENST00000329758 HDAC5Q9UQL6 1122 aa9.15□□□□□ -0.94
TRIM49-201ENST00000329758 USP32Q8NFA0 1604 aa9.15□□□□□ -0.94
TRIM49-201ENST00000329758 FYB1O15117 783 aa9.14□□□□□ -0.95
TRIM49-201ENST00000329758 FKBP5Q13451 457 aaPredicted RBP9.14□□□□□ -0.95
TRIM49-201ENST00000329758 SAMD1Q6SPF0 538 aaPredicted RBP9.14□□□□□ -0.95
TRIM49-201ENST00000329758 DIAPH3Q9NSV4 1193 aa9.14□□□□□ -0.95
TRIM49-201ENST00000329758 SHPRHQ149N8 1683 aa9.14□□□□□ -0.95
TRIM49-201ENST00000329758 POLR3AO14802 1390 aaPredicted RBP9.14□□□□□ -0.95
TRIM49-201ENST00000329758 METP08581 1390 aa9.14□□□□□ -0.95
TRIM49-201ENST00000329758 TRIM6-TRIM34B2RNG4 842 aa9.14□□□□□ -0.95
TRIM49-201ENST00000329758 U2AF2P26368 475 aaKnown RBP eCLIP9.14□□□□□ -0.95
TRIM49-201ENST00000329758 TRIM34Q9BYJ4 488 aa9.14□□□□□ -0.95
TRIM49-201ENST00000329758 KNDC1Q76NI1 1749 aa9.14□□□□□ -0.95
TRIM49-201ENST00000329758 CAPN2P17655 700 aa9.13□□□□□ -0.95
TRIM49-201ENST00000329758 MFAP1P55081 439 aaKnown RBP9.13□□□□□ -0.95
TRIM49-201ENST00000329758 TRMT2AQ8IZ69 625 aaKnown RBP9.13□□□□□ -0.95
TRIM49-201ENST00000329758 SPTLC3Q9NUV7 552 aa9.13□□□□□ -0.95
TRIM49-201ENST00000329758 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.13□□□□□ -0.95
TRIM49-201ENST00000329758 CD163L1Q9NR16 1453 aa9.13□□□□□ -0.95
TRIM49-201ENST00000329758 RIMS1Q86UR5 1692 aaKnown RBP9.13□□□□□ -0.95
TRIM49-201ENST00000329758 SOX12O15370 315 aa9.12□□□□□ -0.95
TRIM49-201ENST00000329758 CTIFO43310 598 aaKnown RBP9.12□□□□□ -0.95
TRIM49-201ENST00000329758 BAG4O95429 457 aaKnown RBP9.12□□□□□ -0.95
TRIM49-201ENST00000329758 CHAF1AQ13111 956 aaPredicted RBP9.12□□□□□ -0.95
TRIM49-201ENST00000329758 LRSAM1Q6UWE0 723 aa9.12□□□□□ -0.95
TRIM49-201ENST00000329758 RUNDC1Q96C34 613 aa9.12□□□□□ -0.95
TRIM49-201ENST00000329758 DLC1Q96QB1 1528 aa9.12□□□□□ -0.95
TRIM49-201ENST00000329758 PTMAP06454 111 aaKnown RBP9.12□□□□□ -0.95
TRIM49-201ENST00000329758 NOLC1Q14978 699 aaKnown RBP eCLIP9.12□□□□□ -0.95
TRIM49-201ENST00000329758 TERF2Q15554 542 aa9.12□□□□□ -0.95
TRIM49-201ENST00000329758 CTR9Q6PD62 1173 aa9.12□□□□□ -0.95
TRIM49-201ENST00000329758 AEBP1Q8IUX7 1158 aa9.12□□□□□ -0.95
TRIM49-201ENST00000329758 PANK1Q8TE04 598 aa9.12□□□□□ -0.95
TRIM49-201ENST00000329758 TSR2Q969E8 191 aaKnown RBP9.12□□□□□ -0.95
TRIM49-201ENST00000329758 TMEM2Q9UHN6 1383 aa9.11□□□□□ -0.95
TRIM49-201ENST00000329758 HOMEZQ8IX15 550 aa9.11□□□□□ -0.95
TRIM49-201ENST00000329758 TSC1Q92574 1164 aa9.11□□□□□ -0.95
TRIM49-201ENST00000329758 PDZRN3Q9UPQ7 1066 aa9.11□□□□□ -0.95
TRIM49-201ENST00000329758 ABCC11Q96J66 1382 aa9.1□□□□□ -0.95
TRIM49-201ENST00000329758 IGSF3O75054 1194 aa9.1□□□□□ -0.95
TRIM49-201ENST00000329758 CAVIN1Q6NZI2 390 aaKnown RBP9.1□□□□□ -0.95
TRIM49-201ENST00000329758 NME9Q86XW9 330 aa9.1□□□□□ -0.95
TRIM49-201ENST00000329758 CFAP53Q96M91 514 aa9.1□□□□□ -0.95
TRIM49-201ENST00000329758 SLC26A8Q96RN1 970 aa9.1□□□□□ -0.95
TRIM49-201ENST00000329758 DDX41Q9UJV9 622 aaKnown RBP9.1□□□□□ -0.95
TRIM49-201ENST00000329758 ANKRD26Q9UPS8 1709 aa9.1□□□□□ -0.95
TRIM49-201ENST00000329758 KIF20BQ96Q89 1820 aa9.1□□□□□ -0.95
TRIM49-201ENST00000329758 HSP90B1P14625 803 aaKnown RBP9.1□□□□□ -0.95
TRIM49-201ENST00000329758 PRIM1P49642 420 aaKnown RBP9.1□□□□□ -0.95
TRIM49-201ENST00000329758 MAPK8IP2Q13387 824 aaPredicted RBP9.1□□□□□ -0.95
TRIM49-201ENST00000329758 TERF2IPQ9NYB0 399 aa9.1□□□□□ -0.95
TRIM49-201ENST00000329758 FEZ2Q9UHY8 353 aaPredicted RBP9.1□□□□□ -0.95
TRIM49-201ENST00000329758 CTNNA3Q9UI47 895 aa9.1□□□□□ -0.95
TRIM49-201ENST00000329758 COG6Q9Y2V7 657 aa9.1□□□□□ -0.95
TRIM49-201ENST00000329758 MORC2Q9Y6X9 1032 aaPredicted RBP9.1□□□□□ -0.95
TRIM49-201ENST00000329758 CPS1P31327 1500 aa9.1□□□□□ -0.95
TRIM49-201ENST00000329758 APPP05067 770 aa9.09□□□□□ -0.95
TRIM49-201ENST00000329758 SSFA2P28290 1259 aa9.09□□□□□ -0.95
TRIM49-201ENST00000329758 LTKP29376 864 aa9.09□□□□□ -0.95
TRIM49-201ENST00000329758 HDGFL2Q7Z4V5 671 aaPredicted RBP9.09□□□□□ -0.95
TRIM49-201ENST00000329758 CNPY4Q8N129 248 aa9.09□□□□□ -0.95
TRIM49-201ENST00000329758 JARID2Q92833 1246 aaPredicted RBP9.09□□□□□ -0.95
TRIM49-201ENST00000329758 ADAMTS13Q76LX8 1427 aa9.09□□□□□ -0.95
TRIM49-201ENST00000329758 AK9Q5TCS8 1911 aa9.09□□□□□ -0.95
TRIM49-201ENST00000329758 K7ELQ4 463 aaPredicted RBP9.09□□□□□ -0.95
TRIM49-201ENST00000329758 HMOX1P09601 288 aa9.09□□□□□ -0.95
TRIM49-201ENST00000329758 CERS3Q8IU89 383 aa9.09□□□□□ -0.95
TRIM49-201ENST00000329758 CNKSR2Q8WXI2 1034 aa9.09□□□□□ -0.95
TRIM49-201ENST00000329758 EMILIN1Q9Y6C2 1016 aa9.09□□□□□ -0.95
TRIM49-201ENST00000329758 ATAD2Q6PL18 1390 aa9.08□□□□□ -0.96
TRIM49-201ENST00000329758 IQSEC2Q5JU85 1478 aa9.08□□□□□ -0.96
TRIM49-201ENST00000329758 RLBP1P12271 317 aa9.08□□□□□ -0.96
TRIM49-201ENST00000329758 NUCB2P80303 420 aa9.08□□□□□ -0.96
TRIM49-201ENST00000329758 KRT222Q8N1A0 295 aa9.08□□□□□ -0.96
TRIM49-201ENST00000329758 RWDD1Q9H446 243 aaPredicted RBP9.08□□□□□ -0.96
TRIM49-201ENST00000329758 LMBRD1Q9NUN5 540 aa9.08□□□□□ -0.96
TRIM49-201ENST00000329758 RRS1Q15050 365 aaKnown RBP9.07□□□□□ -0.96
TRIM49-201ENST00000329758 NGEFQ8N5V2 710 aa9.07□□□□□ -0.96
TRIM49-201ENST00000329758 THUMPD2Q9BTF0 503 aaKnown RBP9.07□□□□□ -0.96
TRIM49-201ENST00000329758 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.07□□□□□ -0.96
TRIM49-201ENST00000329758 SLIT1O75093 1534 aa9.07□□□□□ -0.96
TRIM49-201ENST00000329758 WASLO00401 505 aaPredicted RBP9.07□□□□□ -0.96
TRIM49-201ENST00000329758 PLEKHF1Q96S99 279 aa9.07□□□□□ -0.96
TRIM49-201ENST00000329758 BRMS1Q9HCU9 246 aa9.07□□□□□ -0.96
TRIM49-201ENST00000329758 CEP170BQ9Y4F5 1589 aaPredicted RBP9.07□□□□□ -0.96
TRIM49-201ENST00000329758 TECPR2O15040 1411 aa9.06□□□□□ -0.96
TRIM49-201ENST00000329758 RIOK3O14730 519 aaKnown RBP9.06□□□□□ -0.96
TRIM49-201ENST00000329758 RARSP54136 660 aaKnown RBP9.06□□□□□ -0.96
TRIM49-201ENST00000329758 UVSSAQ2YD98 709 aa9.06□□□□□ -0.96
TRIM49-201ENST00000329758 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.06□□□□□ -0.96
TRIM49-201ENST00000329758 NUDT16Q96DE0 195 aaKnown RBP9.06□□□□□ -0.96
TRIM49-201ENST00000329758 PUS7Q96PZ0 661 aaKnown RBP9.06□□□□□ -0.96
TRIM49-201ENST00000329758 MYCBPQ99417 103 aaPredicted RBP9.06□□□□□ -0.96
TRIM49-201ENST00000329758 POLKQ9UBT6 870 aa9.06□□□□□ -0.96
TRIM49-201ENST00000329758 KCNG1Q9UIX4 513 aa9.06□□□□□ -0.96
TRIM49-201ENST00000329758 ADAMTSL3P82987 1691 aa9.06□□□□□ -0.96
TRIM49-201ENST00000329758 ARHGAP23Q9P227 1491 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms