RNA–Protein interactions for RNA: ENST00000329629.8

FNDC1-202, Transcript of fibronectin type III domain containing 1, humanhuman

TSL 1 (best)

Gene FNDC1, Length 6,034 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-202ENST00000329629 AKNAQ7Z591 1439 aa16.65■□□□□ 0.26
FNDC1-202ENST00000329629 EPRSP07814 1512 aaKnown RBP16.65■□□□□ 0.26
FNDC1-202ENST00000329629 GNAI2P04899 355 aa16.65■□□□□ 0.26
FNDC1-202ENST00000329629 LARP1BQ659C4 914 aaKnown RBP16.65■□□□□ 0.26
FNDC1-202ENST00000329629 RRP9O43818 475 aaKnown RBP16.65■□□□□ 0.26
FNDC1-202ENST00000329629 SLC3A2P08195 630 aaKnown RBP16.65■□□□□ 0.26
FNDC1-202ENST00000329629 STIM1Q13586 685 aa16.65■□□□□ 0.26
FNDC1-202ENST00000329629 XPCQ01831 940 aaPredicted RBP16.65■□□□□ 0.26
FNDC1-202ENST00000329629 LUC7LQ9NQ29 371 aaKnown RBP16.65■□□□□ 0.26
FNDC1-202ENST00000329629 DHX8Q14562 1220 aaKnown RBP16.65■□□□□ 0.26
FNDC1-202ENST00000329629 PDCL2Q8N4E4 241 aa16.65■□□□□ 0.26
FNDC1-202ENST00000329629 SLC12A5Q9H2X9 1139 aa16.65■□□□□ 0.26
FNDC1-202ENST00000329629 SPATA32Q96LK8 384 aa16.64■□□□□ 0.25
FNDC1-202ENST00000329629 TWISTNBQ3B726 338 aaPredicted RBP16.64■□□□□ 0.25
FNDC1-202ENST00000329629 FILIP1Q7Z7B0 1213 aa16.64■□□□□ 0.25
FNDC1-202ENST00000329629 TSR2Q969E8 191 aaKnown RBP16.64■□□□□ 0.25
FNDC1-202ENST00000329629 BACH2Q9BYV9 841 aa16.64■□□□□ 0.25
FNDC1-202ENST00000329629 ESPNB1AK53 854 aa16.64■□□□□ 0.25
FNDC1-202ENST00000329629 SIL1Q9H173 461 aa16.64■□□□□ 0.25
FNDC1-202ENST00000329629 GRIN2AQ12879 1464 aa16.64■□□□□ 0.25
FNDC1-202ENST00000329629 CUL7Q14999 1698 aa16.63■□□□□ 0.25
FNDC1-202ENST00000329629 ERC1Q8IUD2 1116 aa16.63■□□□□ 0.25
FNDC1-202ENST00000329629 CCDC69A6NI79 296 aa16.63■□□□□ 0.25
FNDC1-202ENST00000329629 WWC2Q6AWC2 1192 aa16.63■□□□□ 0.25
FNDC1-202ENST00000329629 BICRAQ9NZM4 1560 aa16.63■□□□□ 0.25
FNDC1-202ENST00000329629 IBSPP21815 317 aaPredicted RBP16.63■□□□□ 0.25
FNDC1-202ENST00000329629 ANKRD1Q15327 319 aa16.63■□□□□ 0.25
FNDC1-202ENST00000329629 TIAM1Q13009 1591 aa16.63■□□□□ 0.25
FNDC1-202ENST00000329629 USP8P40818 1118 aa16.63■□□□□ 0.25
FNDC1-202ENST00000329629 CBX1P83916 185 aa16.63■□□□□ 0.25
FNDC1-202ENST00000329629 ATP2B2Q01814 1243 aa16.63■□□□□ 0.25
FNDC1-202ENST00000329629 NUP133Q8WUM0 1156 aa16.63■□□□□ 0.25
FNDC1-202ENST00000329629 ANKRD30BQ9BXX2 1392 aa16.63■□□□□ 0.25
FNDC1-202ENST00000329629 ADGRL1O94910 1474 aa16.62■□□□□ 0.25
FNDC1-202ENST00000329629 PPP2R1AP30153 589 aa16.62■□□□□ 0.25
FNDC1-202ENST00000329629 CCDC158Q5M9N0 1113 aa16.62■□□□□ 0.25
FNDC1-202ENST00000329629 TAF3Q5VWG9 929 aa16.62■□□□□ 0.25
FNDC1-202ENST00000329629 NUP62CLQ9H1M0 184 aa16.62■□□□□ 0.25
FNDC1-202ENST00000329629 SULT6B1Q6IMI4 303 aa16.62■□□□□ 0.25
FNDC1-202ENST00000329629 ZNF530Q6P9A1 599 aaPredicted RBP16.62■□□□□ 0.25
FNDC1-202ENST00000329629 IQCEQ6IPM2 695 aa16.62■□□□□ 0.25
FNDC1-202ENST00000329629 CCDC141Q6ZP82 1450 aa16.62■□□□□ 0.25
FNDC1-202ENST00000329629 TXLNBQ8N3L3 684 aa16.61■□□□□ 0.25
FNDC1-202ENST00000329629 CNNM1Q9NRU3 951 aa16.61■□□□□ 0.25
FNDC1-202ENST00000329629 UPF3BQ9BZI7 483 aaKnown RBP16.61■□□□□ 0.25
FNDC1-202ENST00000329629 KIF14Q15058 1648 aa16.61■□□□□ 0.25
FNDC1-202ENST00000329629 TRIM22Q8IYM9 498 aa16.61■□□□□ 0.25
FNDC1-202ENST00000329629 PDRG1Q9NUG6 133 aa16.61■□□□□ 0.25
FNDC1-202ENST00000329629 CAMK4Q16566 473 aa16.6■□□□□ 0.25
FNDC1-202ENST00000329629 INCENPQ9NQS7 918 aa16.6■□□□□ 0.25
FNDC1-202ENST00000329629 SYCE3A1L190 88 aa16.6■□□□□ 0.25
FNDC1-202ENST00000329629 KIAA1328Q86T90 577 aa16.6■□□□□ 0.25
FNDC1-202ENST00000329629 MCM4P33991 863 aa16.6■□□□□ 0.25
FNDC1-202ENST00000329629 GBP2P32456 591 aaPredicted RBP16.6■□□□□ 0.25
FNDC1-202ENST00000329629 PNISRQ8TF01 805 aaKnown RBP16.6■□□□□ 0.25
FNDC1-202ENST00000329629 SLC4A2P04920 1241 aa16.59■□□□□ 0.25
FNDC1-202ENST00000329629 CEP57L1Q8IYX8 460 aa16.59■□□□□ 0.25
FNDC1-202ENST00000329629 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.59■□□□□ 0.25
FNDC1-202ENST00000329629 EZRP15311 586 aaKnown RBP16.59■□□□□ 0.25
FNDC1-202ENST00000329629 GIMAP7Q8NHV1 300 aa16.59■□□□□ 0.25
FNDC1-202ENST00000329629 PLB1Q6P1J6 1458 aa16.59■□□□□ 0.25
FNDC1-202ENST00000329629 ATAD2Q6PL18 1390 aa16.58■□□□□ 0.25
FNDC1-202ENST00000329629 PDE3AQ14432 1141 aa16.58■□□□□ 0.25
FNDC1-202ENST00000329629 EPB41L2O43491 1005 aaKnown RBP16.58■□□□□ 0.24
FNDC1-202ENST00000329629 DYDC1Q8WWB3 177 aa16.58■□□□□ 0.24
FNDC1-202ENST00000329629 UBXN4Q92575 508 aa16.58■□□□□ 0.24
FNDC1-202ENST00000329629 JAKMIP1Q96N16 626 aaKnown RBP16.58■□□□□ 0.24
FNDC1-202ENST00000329629 CHD1LQ86WJ1 897 aa16.57■□□□□ 0.24
FNDC1-202ENST00000329629 ZC3H6P61129 1189 aaKnown RBP16.57■□□□□ 0.24
FNDC1-202ENST00000329629 TMCO3Q6UWJ1 677 aa16.57■□□□□ 0.24
FNDC1-202ENST00000329629 SSBP05455 408 aaKnown RBP eCLIP16.57■□□□□ 0.24
FNDC1-202ENST00000329629 CWC27Q6UX04 472 aaKnown RBP16.57■□□□□ 0.24
FNDC1-202ENST00000329629 CCDC148Q8NFR7 591 aa16.57■□□□□ 0.24
FNDC1-202ENST00000329629 NUDT16Q96DE0 195 aaKnown RBP16.57■□□□□ 0.24
FNDC1-202ENST00000329629 NOL7Q9UMY1 257 aaKnown RBP16.57■□□□□ 0.24
FNDC1-202ENST00000329629 SMTNL1A8MU46 457 aa16.56■□□□□ 0.24
FNDC1-202ENST00000329629 ARHGAP29Q52LW3 1261 aa16.56■□□□□ 0.24
FNDC1-202ENST00000329629 TAF4BQ92750 862 aa16.56■□□□□ 0.24
FNDC1-202ENST00000329629 EIF5P55010 431 aaKnown RBP16.55■□□□□ 0.24
FNDC1-202ENST00000329629 CFAP100Q494V2 611 aa16.55■□□□□ 0.24
FNDC1-202ENST00000329629 HDGFL1Q5TGJ6 251 aa16.55■□□□□ 0.24
FNDC1-202ENST00000329629 ZSCAN30Q86W11 494 aa16.55■□□□□ 0.24
FNDC1-202ENST00000329629 BLOC1S2Q6QNY1 142 aa16.55■□□□□ 0.24
FNDC1-202ENST00000329629 CFAP45Q9UL16 551 aa16.55■□□□□ 0.24
FNDC1-202ENST00000329629 SOGA3Q5TF21 947 aa16.55■□□□□ 0.24
FNDC1-202ENST00000329629 PIBF1Q8WXW3 757 aa16.55■□□□□ 0.24
FNDC1-202ENST00000329629 SHTN1A0MZ66 631 aa16.55■□□□□ 0.24
FNDC1-202ENST00000329629 RRS1Q15050 365 aaKnown RBP16.55■□□□□ 0.24
FNDC1-202ENST00000329629 KCNH5Q8NCM2 988 aa16.54■□□□□ 0.24
FNDC1-202ENST00000329629 CAMSAP2Q08AD1 1489 aa16.54■□□□□ 0.24
FNDC1-202ENST00000329629 CCDC113Q9H0I3 377 aa16.54■□□□□ 0.24
FNDC1-202ENST00000329629 MAP3K11Q16584 847 aa16.54■□□□□ 0.24
FNDC1-202ENST00000329629 TRERF1Q96PN7 1200 aa16.54■□□□□ 0.24
FNDC1-202ENST00000329629 CRACR2AQ9BSW2 395 aa16.54■□□□□ 0.24
FNDC1-202ENST00000329629 CASQ1P31415 396 aa16.54■□□□□ 0.24
FNDC1-202ENST00000329629 SSR1P43307 286 aaKnown RBP16.54■□□□□ 0.24
FNDC1-202ENST00000329629 MAP2K1Q02750 393 aaPredicted RBP16.54■□□□□ 0.24
FNDC1-202ENST00000329629 AACSQ86V21 672 aa16.54■□□□□ 0.24
FNDC1-202ENST00000329629 TICAM2Q86XR7 235 aa16.54■□□□□ 0.24
FNDC1-202ENST00000329629 NACAP1Q9BZK3 213 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms