RNA–Protein interactions for RNA: ENST00000329305.6

TPM2-201, Transcript of tropomyosin 2, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM2, Length 1,018 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-201ENST00000329305 TRIM37O94972 964 aa22.18■■□□□ 1.14
TPM2-201ENST00000329305 EP400Q96L91 3159 aa22.17■■□□□ 1.14
TPM2-201ENST00000329305 PCDH11XQ9BZA7 1347 aa22.17■■□□□ 1.14
TPM2-201ENST00000329305 PCDH11YQ9BZA8 1340 aa22.17■■□□□ 1.14
TPM2-201ENST00000329305 SPG7Q9UQ90 795 aa22.16■■□□□ 1.14
TPM2-201ENST00000329305 PLEKHG2Q9H7P9 1386 aa22.15■■□□□ 1.14
TPM2-201ENST00000329305 BAG6P46379 1132 aa22.15■■□□□ 1.14
TPM2-201ENST00000329305 SULT6B1Q6IMI4 303 aa22.15■■□□□ 1.14
TPM2-201ENST00000329305 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.14■■□□□ 1.132e-6■□□□□ 10.5
TPM2-201ENST00000329305 NUDCQ9Y266 331 aa22.14■■□□□ 1.13
TPM2-201ENST00000329305 RGPD1P0DJD0 1748 aa22.14■■□□□ 1.13
TPM2-201ENST00000329305 U2SURPO15042 1029 aaKnown RBP22.13■■□□□ 1.13
TPM2-201ENST00000329305 COL3A1P02461 1466 aaPredicted RBP22.13■■□□□ 1.13
TPM2-201ENST00000329305 AEBP1Q8IUX7 1158 aa22.12■■□□□ 1.13
TPM2-201ENST00000329305 KDRP35968 1356 aa22.12■■□□□ 1.13
TPM2-201ENST00000329305 APBA3O96018 575 aa22.11■■□□□ 1.13
TPM2-201ENST00000329305 BCL11BQ9C0K0 894 aaPredicted RBP22.11■■□□□ 1.13
TPM2-201ENST00000329305 MYBBP1AQ9BQG0 1328 aaKnown RBP22.1■■□□□ 1.13
TPM2-201ENST00000329305 AMOTQ4VCS5 1084 aa22.1■■□□□ 1.13
TPM2-201ENST00000329305 PLEKHO1Q53GL0 409 aaPredicted RBP22.1■■□□□ 1.13
TPM2-201ENST00000329305 HMOX1P09601 288 aa22.09■■□□□ 1.13
TPM2-201ENST00000329305 DEFB132Q7Z7B7 95 aa22.09■■□□□ 1.13
TPM2-201ENST00000329305 ACSBG1Q96GR2 724 aa22.09■■□□□ 1.13
TPM2-201ENST00000329305 PKD1L3Q7Z443 1732 aa22.09■■□□□ 1.13
TPM2-201ENST00000329305 CYP27B1O15528 508 aa22.07■■□□□ 1.12
TPM2-201ENST00000329305 IFNL2Q8IZJ0 200 aa22.07■■□□□ 1.12
TPM2-201ENST00000329305 PRKRIP1Q9H875 184 aaPredicted RBP22.07■■□□□ 1.12
TPM2-201ENST00000329305 SHANK3Q9BYB0 1731 aa22.06■■□□□ 1.12
TPM2-201ENST00000329305 TNS1Q9HBL0 1735 aaKnown RBP22.06■■□□□ 1.12
TPM2-201ENST00000329305 EN1Q05925 392 aaPredicted RBP22.06■■□□□ 1.12
TPM2-201ENST00000329305 SYTL4Q96C24 671 aaPredicted RBP22.05■■□□□ 1.12
TPM2-201ENST00000329305 KCNQ2O43526 872 aa22.04■■□□□ 1.12
TPM2-201ENST00000329305 U2AF1L5P0DN76 240 aaPredicted RBP22.04■■□□□ 1.12
TPM2-201ENST00000329305 PHKG2P15735 406 aa22.04■■□□□ 1.12
TPM2-201ENST00000329305 U2AF1Q01081 240 aaKnown RBP eCLIP22.04■■□□□ 1.12
TPM2-201ENST00000329305 C1orf141Q5JVX7 400 aa22.04■■□□□ 1.12
TPM2-201ENST00000329305 ZNF530Q6P9A1 599 aaPredicted RBP22.04■■□□□ 1.12
TPM2-201ENST00000329305 SBF2Q86WG5 1849 aa22.03■■□□□ 1.12
TPM2-201ENST00000329305 HSP90AB1P08238 724 aaKnown RBP22.03■■□□□ 1.12
TPM2-201ENST00000329305 NHSQ6T4R5 1651 aa22.03■■□□□ 1.12
TPM2-201ENST00000329305 PRIM1P49642 420 aaKnown RBP22.02■■□□□ 1.12
TPM2-201ENST00000329305 NKX1-1Q15270 411 aaPredicted RBP22.02■■□□□ 1.12
TPM2-201ENST00000329305 PLSCR1O15162 318 aa22.01■■□□□ 1.11
TPM2-201ENST00000329305 PTF1AQ7RTS3 328 aa22.01■■□□□ 1.11
TPM2-201ENST00000329305 ANP32CO43423 234 aa22■■□□□ 1.11
TPM2-201ENST00000329305 EZH2Q15910 746 aaKnown RBP22■■□□□ 1.11
TPM2-201ENST00000329305 CAMKK2Q96RR4 588 aa22■■□□□ 1.11
TPM2-201ENST00000329305 DOT1LQ8TEK3 1739 aa21.99■■□□□ 1.11
TPM2-201ENST00000329305 FCHSD2O94868 740 aa21.98■■□□□ 1.11
TPM2-201ENST00000329305 PRKAR2BP31323 418 aa21.98■■□□□ 1.11
TPM2-201ENST00000329305 DCAF5Q96JK2 942 aa21.98■■□□□ 1.11
TPM2-201ENST00000329305 RSPH6AQ9H0K4 717 aa21.98■■□□□ 1.11
TPM2-201ENST00000329305 NEFMP07197 916 aa21.97■■□□□ 1.11
TPM2-201ENST00000329305 AKAP4Q5JQC9 854 aa21.97■■□□□ 1.11
TPM2-201ENST00000329305 MPRIPQ6WCQ1 1025 aa21.96■■□□□ 1.11
TPM2-201ENST00000329305 GAS2L2Q8NHY3 880 aa21.96■■□□□ 1.11
TPM2-201ENST00000329305 MTHFSDQ2M296 383 aaKnown RBP21.95■■□□□ 1.1
TPM2-201ENST00000329305 PNNQ9H307 717 aaKnown RBP21.95■■□□□ 1.1
TPM2-201ENST00000329305 TMOD3Q9NYL9 352 aa21.94■■□□□ 1.1
TPM2-201ENST00000329305 KAT6BQ8WYB5 2073 aa21.94■■□□□ 1.1
TPM2-201ENST00000329305 RGPD3A6NKT7 1758 aaPredicted RBP21.93■■□□□ 1.1
TPM2-201ENST00000329305 ERVV-2B6SEH9 535 aa21.93■■□□□ 1.1
TPM2-201ENST00000329305 RGPD4Q7Z3J3 1758 aa21.93■■□□□ 1.1
TPM2-201ENST00000329305 BTAF1O14981 1849 aa21.92■■□□□ 1.1
TPM2-201ENST00000329305 WDR43Q15061 677 aaKnown RBP eCLIP21.92■■□□□ 1.1
TPM2-201ENST00000329305 TXNRD1Q16881 649 aa21.91■■□□□ 1.1
TPM2-201ENST00000329305 KDM6AO15550 1401 aaPredicted RBP21.9■■□□□ 1.1
TPM2-201ENST00000329305 TOGARAM1Q9Y4F4 1720 aa21.9■■□□□ 1.1
TPM2-201ENST00000329305 CABP4P57796 275 aa21.9■■□□□ 1.1
TPM2-201ENST00000329305 NBPF14Q5TI25 921 aa21.9■■□□□ 1.1
TPM2-201ENST00000329305 PIGBQ92521 554 aa21.9■■□□□ 1.1
TPM2-201ENST00000329305 SMARCC1Q92922 1105 aaPredicted RBP21.89■■□□□ 1.09
TPM2-201ENST00000329305 PHACTR3Q96KR7 559 aa21.89■■□□□ 1.09
TPM2-201ENST00000329305 MAP3K5Q99683 1374 aa21.88■■□□□ 1.09
TPM2-201ENST00000329305 MAPK8IP3Q9UPT6 1336 aa21.88■■□□□ 1.09
TPM2-201ENST00000329305 GNAT3A8MTJ3 354 aa21.88■■□□□ 1.09
TPM2-201ENST00000329305 SLC27A3Q5K4L6 730 aa21.88■■□□□ 1.09
TPM2-201ENST00000329305 RREB1Q92766 1687 aa21.88■■□□□ 1.09
TPM2-201ENST00000329305 PROM2Q8N271 834 aa21.87■■□□□ 1.09
TPM2-201ENST00000329305 PALLDQ8WX93 1383 aa21.87■■□□□ 1.09
TPM2-201ENST00000329305 RNMTO43148 476 aaKnown RBP21.86■■□□□ 1.09
TPM2-201ENST00000329305 RTF1Q92541 710 aaKnown RBP21.85■■□□□ 1.09
TPM2-201ENST00000329305 HMGB2P26583 209 aaKnown RBP21.84■■□□□ 1.09
TPM2-201ENST00000329305 PLEKHF1Q96S99 279 aa21.84■■□□□ 1.09
TPM2-201ENST00000329305 LGR6Q9HBX8 967 aa21.84■■□□□ 1.09
TPM2-201ENST00000329305 CCNL1Q9UK58 526 aaPredicted RBP21.84■■□□□ 1.09
TPM2-201ENST00000329305 ITGB4P16144 1822 aa21.84■■□□□ 1.09
TPM2-201ENST00000329305 NUP188Q5SRE5 1749 aa21.83■■□□□ 1.09
TPM2-201ENST00000329305 NFATC2IPQ8NCF5 419 aa21.83■■□□□ 1.09
TPM2-201ENST00000329305 SLC52A2Q9HAB3 445 aa21.83■■□□□ 1.09
TPM2-201ENST00000329305 ASAP1Q9ULH1 1129 aa21.82■■□□□ 1.08
TPM2-201ENST00000329305 TEFQ10587 303 aa21.81■■□□□ 1.08
TPM2-201ENST00000329305 MRS2Q9HD23 443 aa21.81■■□□□ 1.08
TPM2-201ENST00000329305 STK32BQ9NY57 414 aa21.81■■□□□ 1.08
TPM2-201ENST00000329305 SCN11AQ9UI33 1791 aa21.8■■□□□ 1.08
TPM2-201ENST00000329305 HTATSF1O43719 755 aaKnown RBP21.8■■□□□ 1.08
TPM2-201ENST00000329305 R3HDM1Q15032 1099 aaKnown RBP21.8■■□□□ 1.08
TPM2-201ENST00000329305 ATG3Q9NT62 314 aa21.8■■□□□ 1.08
TPM2-201ENST00000329305 LRRC4BQ9NT99 713 aa21.8■■□□□ 1.08
TPM2-201ENST00000329305 ADAMTS8Q9UP79 889 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms