RNA–Protein interactions for RNA: ENST00000328933.9

SYNGR1-203, Transcript of synaptogyrin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR1, Length 4,391 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-203ENST00000328933 CCDC158Q5M9N0 1113 aa17.6■□□□□ 0.41
SYNGR1-203ENST00000328933 CDCA7Q9BWT1 371 aaPredicted RBP17.6■□□□□ 0.41
SYNGR1-203ENST00000328933 ARHGEF12Q9NZN5 1544 aa17.6■□□□□ 0.41
SYNGR1-203ENST00000328933 FAM161AQ3B820 660 aa17.6■□□□□ 0.41
SYNGR1-203ENST00000328933 ATF7IPQ6VMQ6 1270 aa17.6■□□□□ 0.41
SYNGR1-203ENST00000328933 AMER1Q5JTC6 1135 aaPredicted RBP17.6■□□□□ 0.41
SYNGR1-203ENST00000328933 AKAP17AQ02040 695 aaKnown RBP17.59■□□□□ 0.41
SYNGR1-203ENST00000328933 KDM5DQ9BY66 1539 aa17.59■□□□□ 0.41
SYNGR1-203ENST00000328933 FSD1Q9BTV5 496 aa17.59■□□□□ 0.41
SYNGR1-203ENST00000328933 ZKSCAN1P17029 563 aaPredicted RBP17.58■□□□□ 0.41
SYNGR1-203ENST00000328933 CARD14Q9BXL6 1004 aa17.58■□□□□ 0.41
SYNGR1-203ENST00000328933 ANO2Q9NQ90 1003 aa17.58■□□□□ 0.41
SYNGR1-203ENST00000328933 NLRP1Q9C000 1473 aa17.58■□□□□ 0.41
SYNGR1-203ENST00000328933 ATP5J2-PTCD1G3V325 749 aa17.58■□□□□ 0.41
SYNGR1-203ENST00000328933 ANKIB1Q9P2G1 1089 aa17.58■□□□□ 0.41
SYNGR1-203ENST00000328933 MTMR7Q9Y216 660 aa17.58■□□□□ 0.41
SYNGR1-203ENST00000328933 AKAP4Q5JQC9 854 aa17.58■□□□□ 0.4
SYNGR1-203ENST00000328933 NBPF6Q5VWK0 638 aa17.58■□□□□ 0.4
SYNGR1-203ENST00000328933 NBPF5PQ86XG9 351 aaPredicted RBP17.58■□□□□ 0.4
SYNGR1-203ENST00000328933 NBPF4Q96M43 638 aa17.58■□□□□ 0.4
SYNGR1-203ENST00000328933 CT47B1P0C2W7 299 aaPredicted RBP17.58■□□□□ 0.4
SYNGR1-203ENST00000328933 POLD1P28340 1107 aa17.57■□□□□ 0.4
SYNGR1-203ENST00000328933 ADCY10Q96PN6 1610 aa17.57■□□□□ 0.4
SYNGR1-203ENST00000328933 PLEKHG3A1L390 1219 aa17.57■□□□□ 0.4
SYNGR1-203ENST00000328933 TTC39AQ5SRH9 613 aa17.57■□□□□ 0.4
SYNGR1-203ENST00000328933 HYPKQ9NX55 129 aa17.57■□□□□ 0.4
SYNGR1-203ENST00000328933 A0A087WZG4 1122 aa17.57■□□□□ 0.4
SYNGR1-203ENST00000328933 F6X3S4 739 aa17.57■□□□□ 0.4
SYNGR1-203ENST00000328933 C6orf229H3BNL8 230 aa17.56■□□□□ 0.4
SYNGR1-203ENST00000328933 BAG6P46379 1132 aa17.56■□□□□ 0.4
SYNGR1-203ENST00000328933 CHAF1AQ13111 956 aaPredicted RBP17.56■□□□□ 0.4
SYNGR1-203ENST00000328933 RTCBQ9Y3I0 505 aaKnown RBP17.56■□□□□ 0.4
SYNGR1-203ENST00000328933 PIP4K2AP48426 406 aaPredicted RBP17.56■□□□□ 0.4
SYNGR1-203ENST00000328933 ERC1Q8IUD2 1116 aa17.56■□□□□ 0.4
SYNGR1-203ENST00000328933 SPINK5Q9NQ38 1064 aaPredicted RBP17.56■□□□□ 0.4
SYNGR1-203ENST00000328933 TRPC5Q9UL62 973 aaPredicted RBP17.56■□□□□ 0.4
SYNGR1-203ENST00000328933 ERVK-7P63135 1459 aa17.56■□□□□ 0.4
SYNGR1-203ENST00000328933 APBA3O96018 575 aa17.56■□□□□ 0.4
SYNGR1-203ENST00000328933 CPLX2Q6PUV4 134 aaKnown RBP17.56■□□□□ 0.4
SYNGR1-203ENST00000328933 RASSF8Q8NHQ8 419 aa17.56■□□□□ 0.4
SYNGR1-203ENST00000328933 METTL24Q5JXM2 366 aa17.55■□□□□ 0.4
SYNGR1-203ENST00000328933 STK32BQ9NY57 414 aa17.55■□□□□ 0.4
SYNGR1-203ENST00000328933 PLCB2Q00722 1185 aa17.55■□□□□ 0.4
SYNGR1-203ENST00000328933 SIRT1Q96EB6 747 aa17.55■□□□□ 0.4
SYNGR1-203ENST00000328933 DCAF5Q96JK2 942 aa17.55■□□□□ 0.4
SYNGR1-203ENST00000328933 MTHFSDQ2M296 383 aaKnown RBP17.55■□□□□ 0.4
SYNGR1-203ENST00000328933 ZSCAN29Q8IWY8 852 aaPredicted RBP17.54■□□□□ 0.4
SYNGR1-203ENST00000328933 DNAAF4Q8WXU2 420 aa17.54■□□□□ 0.4
SYNGR1-203ENST00000328933 SETDB2Q96T68 719 aa17.54■□□□□ 0.4
SYNGR1-203ENST00000328933 ABCF2Q9UG63 623 aa17.54■□□□□ 0.4
SYNGR1-203ENST00000328933 CCNL1Q9UK58 526 aaPredicted RBP17.54■□□□□ 0.4
SYNGR1-203ENST00000328933 PRIM1P49642 420 aaKnown RBP17.54■□□□□ 0.4
SYNGR1-203ENST00000328933 PCDH11XQ9BZA7 1347 aa17.53■□□□□ 0.4
SYNGR1-203ENST00000328933 PCDH11YQ9BZA8 1340 aa17.53■□□□□ 0.4
SYNGR1-203ENST00000328933 FKBP4Q02790 459 aaKnown RBP eCLIP17.53■□□□□ 0.4
SYNGR1-203ENST00000328933 IKQ13123 557 aaPredicted RBP17.53■□□□□ 0.4
SYNGR1-203ENST00000328933 IFIT5Q13325 482 aaKnown RBP17.53■□□□□ 0.4
SYNGR1-203ENST00000328933 RALYLQ86SE5 291 aaKnown RBP17.53■□□□□ 0.4
SYNGR1-203ENST00000328933 CCAR1Q8IX12 1150 aaKnown RBP17.53■□□□□ 0.4
SYNGR1-203ENST00000328933 REC8O95072 547 aa17.52■□□□□ 0.4
SYNGR1-203ENST00000328933 RXRBP28702 533 aa17.52■□□□□ 0.4
SYNGR1-203ENST00000328933 PPP1R42Q7Z4L9 355 aa17.52■□□□□ 0.4
SYNGR1-203ENST00000328933 CERKQ8TCT0 537 aa17.52■□□□□ 0.4
SYNGR1-203ENST00000328933 SSH1Q8WYL5 1049 aa17.52■□□□□ 0.4
SYNGR1-203ENST00000328933 PREX2Q70Z35 1606 aa17.52■□□□□ 0.4
SYNGR1-203ENST00000328933 ERICH2A1L162 156 aa17.52■□□□□ 0.4
SYNGR1-203ENST00000328933 GNPATO15228 680 aa17.52■□□□□ 0.4
SYNGR1-203ENST00000328933 DDX46Q7L014 1031 aaKnown RBP17.52■□□□□ 0.4
SYNGR1-203ENST00000328933 NFXL1Q6ZNB6 911 aa17.52■□□□□ 0.39
SYNGR1-203ENST00000328933 SLC4A3P48751 1232 aa17.51■□□□□ 0.39
SYNGR1-203ENST00000328933 RNF20Q5VTR2 975 aa17.51■□□□□ 0.39
SYNGR1-203ENST00000328933 ZNF772Q68DY9 489 aaPredicted RBP17.51■□□□□ 0.39
SYNGR1-203ENST00000328933 KIF3AQ9Y496 699 aa17.51■□□□□ 0.39
SYNGR1-203ENST00000328933 COL17A1Q9UMD9 1497 aaPredicted RBP17.51■□□□□ 0.39
SYNGR1-203ENST00000328933 FLIIQ13045 1269 aa17.51■□□□□ 0.39
SYNGR1-203ENST00000328933 ST18O60284 1047 aa17.51■□□□□ 0.39
SYNGR1-203ENST00000328933 SLFN5Q08AF3 891 aa17.51■□□□□ 0.39
SYNGR1-203ENST00000328933 PI4KAP2A4QPH2 592 aa17.51■□□□□ 0.39
SYNGR1-203ENST00000328933 PI4KAP1Q8N8J0 262 aa17.51■□□□□ 0.39
SYNGR1-203ENST00000328933 IL1RAPL2Q9NP60 686 aa17.51■□□□□ 0.39
SYNGR1-203ENST00000328933 FOXD4L1Q9NU39 408 aa17.51■□□□□ 0.39
SYNGR1-203ENST00000328933 CPLX1O14810 134 aa17.5■□□□□ 0.39
SYNGR1-203ENST00000328933 PDE3AQ14432 1141 aa17.5■□□□□ 0.39
SYNGR1-203ENST00000328933 ANKRD13DQ6ZTN6 518 aa17.5■□□□□ 0.39
SYNGR1-203ENST00000328933 RAI14Q9P0K7 980 aa17.5■□□□□ 0.39
SYNGR1-203ENST00000328933 ST5P78524 1137 aa17.5■□□□□ 0.39
SYNGR1-203ENST00000328933 ATP2B2Q01814 1243 aa17.5■□□□□ 0.39
SYNGR1-203ENST00000328933 UBE3BQ7Z3V4 1068 aa17.5■□□□□ 0.39
SYNGR1-203ENST00000328933 SLKQ9H2G2 1235 aaPredicted RBP17.5■□□□□ 0.39
SYNGR1-203ENST00000328933 JARID2Q92833 1246 aaPredicted RBP17.5■□□□□ 0.39
SYNGR1-203ENST00000328933 TMOD2Q9NZR1 351 aa17.5■□□□□ 0.39
SYNGR1-203ENST00000328933 NIP7Q9Y221 180 aaKnown RBP eCLIP17.5■□□□□ 0.39
SYNGR1-203ENST00000328933 FANCIQ9NVI1 1328 aa17.5■□□□□ 0.39
SYNGR1-203ENST00000328933 COPS6Q7L5N1 327 aa17.49■□□□□ 0.39
SYNGR1-203ENST00000328933 LRP2BPQ9P2M1 347 aa17.49■□□□□ 0.39
SYNGR1-203ENST00000328933 ROBO2Q9HCK4 1378 aa17.49■□□□□ 0.39
SYNGR1-203ENST00000328933 MBIPQ9NS73 344 aa17.49■□□□□ 0.39
SYNGR1-203ENST00000328933 IFIT1P09914 478 aaKnown RBP17.49■□□□□ 0.39
SYNGR1-203ENST00000328933 AACSQ86V21 672 aa17.49■□□□□ 0.39
SYNGR1-203ENST00000328933 XAGE3Q8WTP9 111 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms