RNA–Protein interactions for RNA: ENST00000328863.8

CLRN1-203, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-203ENST00000328863 PARD3Q8TEW0 1356 aa20.08■□□□□ 0.81
CLRN1-203ENST00000328863 IGSF1Q8N6C5 1336 aa20.08■□□□□ 0.81
CLRN1-203ENST00000328863 CNGB1Q14028 1251 aaPredicted RBP20.08■□□□□ 0.81
CLRN1-203ENST00000328863 PCDH11XQ9BZA7 1347 aa20.07■□□□□ 0.8
CLRN1-203ENST00000328863 PCDH11YQ9BZA8 1340 aa20.07■□□□□ 0.8
CLRN1-203ENST00000328863 BTAF1O14981 1849 aa20.07■□□□□ 0.8
CLRN1-203ENST00000328863 NUP188Q5SRE5 1749 aa20.06■□□□□ 0.8
CLRN1-203ENST00000328863 DEFB132Q7Z7B7 95 aa20.06■□□□□ 0.8
CLRN1-203ENST00000328863 EYA1Q99502 592 aa20.06■□□□□ 0.8
CLRN1-203ENST00000328863 COL3A1P02461 1466 aaPredicted RBP20.05■□□□□ 0.8
CLRN1-203ENST00000328863 MTHFSP49914 203 aa20.05■□□□□ 0.8
CLRN1-203ENST00000328863 ZCRB1Q8TBF4 217 aaKnown RBP20.05■□□□□ 0.8
CLRN1-203ENST00000328863 SRCAPQ6ZRS2 3230 aa20.05■□□□□ 0.8
CLRN1-203ENST00000328863 KAT6BQ8WYB5 2073 aa20.04■□□□□ 0.8
CLRN1-203ENST00000328863 APBA3O96018 575 aa20.03■□□□□ 0.8
CLRN1-203ENST00000328863 DDX54Q8TDD1 881 aaKnown RBP20.03■□□□□ 0.8
CLRN1-203ENST00000328863 TOGARAM1Q9Y4F4 1720 aa20.02■□□□□ 0.8
CLRN1-203ENST00000328863 BCL11BQ9C0K0 894 aaPredicted RBP20.02■□□□□ 0.8
CLRN1-203ENST00000328863 KDRP35968 1356 aa20.01■□□□□ 0.79
CLRN1-203ENST00000328863 EN1Q05925 392 aaPredicted RBP20■□□□□ 0.79
CLRN1-203ENST00000328863 CFAP53Q96M91 514 aa20■□□□□ 0.79
CLRN1-203ENST00000328863 SPG7Q9UQ90 795 aa20■□□□□ 0.79
CLRN1-203ENST00000328863 IL13P35225 146 aa19.99■□□□□ 0.79
CLRN1-203ENST00000328863 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.99■□□□□ 0.79
CLRN1-203ENST00000328863 ITGB4P16144 1822 aa19.98■□□□□ 0.79
CLRN1-203ENST00000328863 DIAPH1O60610 1272 aaKnown RBP19.98■□□□□ 0.79
CLRN1-203ENST00000328863 ACSBG1Q96GR2 724 aa19.98■□□□□ 0.79
CLRN1-203ENST00000328863 DDX10Q13206 875 aaKnown RBP19.97■□□□□ 0.79
CLRN1-203ENST00000328863 PPP2R1AP30153 589 aa19.96■□□□□ 0.79
CLRN1-203ENST00000328863 EZH2Q15910 746 aaKnown RBP19.96■□□□□ 0.79
CLRN1-203ENST00000328863 SULT6B1Q6IMI4 303 aa19.95■□□□□ 0.78
CLRN1-203ENST00000328863 CAMKK2Q96RR4 588 aa19.95■□□□□ 0.78
CLRN1-203ENST00000328863 LY75O60449 1722 aa19.94■□□□□ 0.78
CLRN1-203ENST00000328863 AEBP1Q8IUX7 1158 aa19.94■□□□□ 0.78
CLRN1-203ENST00000328863 VIRMAQ69YN4 1812 aaKnown RBP19.93■□□□□ 0.78
CLRN1-203ENST00000328863 PLSCR1O15162 318 aa19.93■□□□□ 0.78
CLRN1-203ENST00000328863 CYP27B1O15528 508 aa19.93■□□□□ 0.78
CLRN1-203ENST00000328863 AMOTQ4VCS5 1084 aa19.93■□□□□ 0.78
CLRN1-203ENST00000328863 SYTL4Q96C24 671 aaPredicted RBP19.93■□□□□ 0.78
CLRN1-203ENST00000328863 KCNQ2O43526 872 aa19.92■□□□□ 0.78
CLRN1-203ENST00000328863 PLEKHO1Q53GL0 409 aaPredicted RBP19.92■□□□□ 0.78
CLRN1-203ENST00000328863 PTF1AQ7RTS3 328 aa19.92■□□□□ 0.78
CLRN1-203ENST00000328863 IFNL2Q8IZJ0 200 aa19.92■□□□□ 0.78
CLRN1-203ENST00000328863 RALBP1Q15311 655 aa19.91■□□□□ 0.78
CLRN1-203ENST00000328863 PAPPAQ13219 1627 aa19.91■□□□□ 0.78
CLRN1-203ENST00000328863 U2SURPO15042 1029 aaKnown RBP19.9■□□□□ 0.78
CLRN1-203ENST00000328863 PHKG2P15735 406 aa19.9■□□□□ 0.78
CLRN1-203ENST00000328863 NUDCQ9Y266 331 aa19.9■□□□□ 0.78
CLRN1-203ENST00000328863 SCN11AQ9UI33 1791 aa19.9■□□□□ 0.78
CLRN1-203ENST00000328863 HSP90AB1P08238 724 aaKnown RBP19.89■□□□□ 0.77
CLRN1-203ENST00000328863 HMOX1P09601 288 aa19.89■□□□□ 0.77
CLRN1-203ENST00000328863 ZNF530Q6P9A1 599 aaPredicted RBP19.89■□□□□ 0.77
CLRN1-203ENST00000328863 PRIM1P49642 420 aaKnown RBP19.88■□□□□ 0.77
CLRN1-203ENST00000328863 NKX1-1Q15270 411 aaPredicted RBP19.88■□□□□ 0.77
CLRN1-203ENST00000328863 C1orf141Q5JVX7 400 aa19.88■□□□□ 0.77
CLRN1-203ENST00000328863 ZNF316A6NFI3 1004 aaPredicted RBP19.87■□□□□ 0.77
CLRN1-203ENST00000328863 NBPF14Q5TI25 921 aa19.86■□□□□ 0.77
CLRN1-203ENST00000328863 KDM6AO15550 1401 aaPredicted RBP19.85■□□□□ 0.77
CLRN1-203ENST00000328863 C5P01031 1676 aa19.85■□□□□ 0.77
CLRN1-203ENST00000328863 MYBBP1AQ9BQG0 1328 aaKnown RBP19.85■□□□□ 0.77
CLRN1-203ENST00000328863 TXNRD1Q16881 649 aa19.85■□□□□ 0.77
CLRN1-203ENST00000328863 ADAMTS7Q9UKP4 1686 aa19.84■□□□□ 0.77
CLRN1-203ENST00000328863 QSER1Q2KHR3 1735 aa19.83■□□□□ 0.77
CLRN1-203ENST00000328863 MPRIPQ6WCQ1 1025 aa19.83■□□□□ 0.77
CLRN1-203ENST00000328863 DCAF5Q96JK2 942 aa19.83■□□□□ 0.77
CLRN1-203ENST00000328863 TMOD3Q9NYL9 352 aa19.83■□□□□ 0.77
CLRN1-203ENST00000328863 MRC1P22897 1456 aa19.83■□□□□ 0.76
CLRN1-203ENST00000328863 PALLDQ8WX93 1383 aa19.83■□□□□ 0.76
CLRN1-203ENST00000328863 TAF1LQ8IZX4 1826 aa19.82■□□□□ 0.76
CLRN1-203ENST00000328863 SLC27A3Q5K4L6 730 aa19.82■□□□□ 0.76
CLRN1-203ENST00000328863 LRP5O75197 1615 aa19.82■□□□□ 0.76
CLRN1-203ENST00000328863 U2AF1L5P0DN76 240 aaPredicted RBP19.81■□□□□ 0.76
CLRN1-203ENST00000328863 U2AF1Q01081 240 aaKnown RBP eCLIP19.81■□□□□ 0.76
CLRN1-203ENST00000328863 AKAP4Q5JQC9 854 aa19.81■□□□□ 0.76
CLRN1-203ENST00000328863 CASZ1Q86V15 1759 aa19.8■□□□□ 0.76
CLRN1-203ENST00000328863 PSDA5PKW4 1024 aaPredicted RBP19.8■□□□□ 0.76
CLRN1-203ENST00000328863 GAS2L2Q8NHY3 880 aa19.8■□□□□ 0.76
CLRN1-203ENST00000328863 SMARCC1Q92922 1105 aaPredicted RBP19.8■□□□□ 0.76
CLRN1-203ENST00000328863 TUBGCP6Q96RT7 1819 aa19.79■□□□□ 0.76
CLRN1-203ENST00000328863 ERVV-2B6SEH9 535 aa19.79■□□□□ 0.76
CLRN1-203ENST00000328863 PRKAR2BP31323 418 aa19.79■□□□□ 0.76
CLRN1-203ENST00000328863 R3HDM1Q15032 1099 aaKnown RBP19.79■□□□□ 0.76
CLRN1-203ENST00000328863 RSPH6AQ9H0K4 717 aa19.79■□□□□ 0.76
CLRN1-203ENST00000328863 ZNF831Q5JPB2 1677 aa19.78■□□□□ 0.76
CLRN1-203ENST00000328863 PROM2Q8N271 834 aa19.78■□□□□ 0.76
CLRN1-203ENST00000328863 PRKRIP1Q9H875 184 aaPredicted RBP19.78■□□□□ 0.76
CLRN1-203ENST00000328863 ANO8Q9HCE9 1232 aaPredicted RBP19.78■□□□□ 0.76
CLRN1-203ENST00000328863 STK32BQ9NY57 414 aa19.78■□□□□ 0.76
CLRN1-203ENST00000328863 MAP3K5Q99683 1374 aa19.78■□□□□ 0.76
CLRN1-203ENST00000328863 NEFMP07197 916 aa19.77■□□□□ 0.76
CLRN1-203ENST00000328863 HMGB2P26583 209 aaKnown RBP19.77■□□□□ 0.76
CLRN1-203ENST00000328863 MTHFSDQ2M296 383 aaKnown RBP19.77■□□□□ 0.76
CLRN1-203ENST00000328863 CCNL1Q9UK58 526 aaPredicted RBP19.77■□□□□ 0.76
CLRN1-203ENST00000328863 PIGBQ92521 554 aa19.76■□□□□ 0.75
CLRN1-203ENST00000328863 CICQ96RK0 1608 aaPredicted RBP19.76■□□□□ 0.75
CLRN1-203ENST00000328863 SIPA1L3O60292 1781 aaPredicted RBP19.75■□□□□ 0.75
CLRN1-203ENST00000328863 FCHSD2O94868 740 aa19.75■□□□□ 0.75
CLRN1-203ENST00000328863 CABP4P57796 275 aa19.75■□□□□ 0.75
CLRN1-203ENST00000328863 C4BP0C0L5 1744 aa19.75■□□□□ 0.75
CLRN1-203ENST00000328863 DLG5Q8TDM6 1919 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms