RNA–Protein interactions for RNA: ENST00000328596.10

TNFRSF18-201, Transcript of TNF receptor superfamily member 18, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TNFRSF18, Length 851 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF18-201ENST00000328596 RGPD4Q7Z3J3 1758 aa28.62■■■□□ 2.17
TNFRSF18-201ENST00000328596 NHSQ6T4R5 1651 aa28.61■■■□□ 2.17
TNFRSF18-201ENST00000328596 PER1O15534 1290 aaPredicted RBP28.61■■■□□ 2.17
TNFRSF18-201ENST00000328596 TATP17735 454 aaPredicted RBP28.61■■■□□ 2.17
TNFRSF18-201ENST00000328596 PSDA5PKW4 1024 aaPredicted RBP28.6■■■□□ 2.17
TNFRSF18-201ENST00000328596 NCAPD2Q15021 1401 aa28.6■■■□□ 2.17
TNFRSF18-201ENST00000328596 NUP188Q5SRE5 1749 aa28.59■■■□□ 2.17
TNFRSF18-201ENST00000328596 EYA1Q99502 592 aa28.58■■■□□ 2.17
TNFRSF18-201ENST00000328596 SHANK3Q9BYB0 1731 aa28.57■■■□□ 2.16
TNFRSF18-201ENST00000328596 EIF4A2Q14240 407 aaKnown RBP28.57■■■□□ 2.16
TNFRSF18-201ENST00000328596 R3HDM1Q15032 1099 aaKnown RBP28.57■■■□□ 2.16
TNFRSF18-201ENST00000328596 ZEB1P37275 1124 aaPredicted RBP28.56■■■□□ 2.16
TNFRSF18-201ENST00000328596 NBPF14Q5TI25 921 aa28.56■■■□□ 2.16
TNFRSF18-201ENST00000328596 KAT6BQ8WYB5 2073 aa28.56■■■□□ 2.16
TNFRSF18-201ENST00000328596 SRCAPQ6ZRS2 3230 aa28.55■■■□□ 2.16
TNFRSF18-201ENST00000328596 PROM2Q8N271 834 aa28.53■■■□□ 2.16
TNFRSF18-201ENST00000328596 PCDH11XQ9BZA7 1347 aa28.52■■■□□ 2.16
TNFRSF18-201ENST00000328596 PCDH11YQ9BZA8 1340 aa28.52■■■□□ 2.16
TNFRSF18-201ENST00000328596 CC2D1BQ5T0F9 858 aaKnown RBP28.51■■■□□ 2.15
TNFRSF18-201ENST00000328596 BTAF1O14981 1849 aa28.5■■■□□ 2.15
TNFRSF18-201ENST00000328596 TXNRD1Q16881 649 aa28.5■■■□□ 2.15
TNFRSF18-201ENST00000328596 NPC1L1Q9UHC9 1359 aa28.5■■■□□ 2.15
TNFRSF18-201ENST00000328596 PRIM1P49642 420 aaKnown RBP28.49■■■□□ 2.15
TNFRSF18-201ENST00000328596 SYTL4Q96C24 671 aaPredicted RBP28.48■■■□□ 2.15
TNFRSF18-201ENST00000328596 IGSF1Q8N6C5 1336 aa28.47■■■□□ 2.15
TNFRSF18-201ENST00000328596 PKD1L3Q7Z443 1732 aa28.47■■■□□ 2.15
TNFRSF18-201ENST00000328596 DOT1LQ8TEK3 1739 aa28.47■■■□□ 2.15
TNFRSF18-201ENST00000328596 CYP27B1O15528 508 aa28.46■■■□□ 2.15
TNFRSF18-201ENST00000328596 SPG7Q9UQ90 795 aa28.46■■■□□ 2.15
TNFRSF18-201ENST00000328596 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.45■■■□□ 2.14
TNFRSF18-201ENST00000328596 MTHFSP49914 203 aa28.43■■■□□ 2.14
TNFRSF18-201ENST00000328596 ANO8Q9HCE9 1232 aaPredicted RBP28.43■■■□□ 2.14
TNFRSF18-201ENST00000328596 PLEKHG2Q9H7P9 1386 aa28.42■■■□□ 2.14
TNFRSF18-201ENST00000328596 IL13P35225 146 aa28.4■■■□□ 2.14
TNFRSF18-201ENST00000328596 CNGB1Q14028 1251 aaPredicted RBP28.4■■■□□ 2.14
TNFRSF18-201ENST00000328596 LRP5O75197 1615 aa28.4■■■□□ 2.14
TNFRSF18-201ENST00000328596 NKX1-1Q15270 411 aaPredicted RBP28.38■■■□□ 2.13
TNFRSF18-201ENST00000328596 STK32BQ9NY57 414 aa28.37■■■□□ 2.13
TNFRSF18-201ENST00000328596 SLC27A3Q5K4L6 730 aa28.36■■■□□ 2.13
TNFRSF18-201ENST00000328596 IFNL2Q8IZJ0 200 aa28.36■■■□□ 2.13
TNFRSF18-201ENST00000328596 PHKG2P15735 406 aa28.35■■■□□ 2.13
TNFRSF18-201ENST00000328596 SLC15A2Q16348 729 aa28.35■■■□□ 2.13
TNFRSF18-201ENST00000328596 AEBP1Q8IUX7 1158 aa28.35■■■□□ 2.13
TNFRSF18-201ENST00000328596 LRRC4BQ9NT99 713 aa28.35■■■□□ 2.13
TNFRSF18-201ENST00000328596 SULT6B1Q6IMI4 303 aa28.34■■■□□ 2.13
TNFRSF18-201ENST00000328596 PLEKHO1Q53GL0 409 aaPredicted RBP28.33■■■□□ 2.13
TNFRSF18-201ENST00000328596 MPRIPQ6WCQ1 1025 aa28.33■■■□□ 2.13
TNFRSF18-201ENST00000328596 KDRP35968 1356 aa28.33■■■□□ 2.13
TNFRSF18-201ENST00000328596 TOGARAM1Q9Y4F4 1720 aa28.32■■■□□ 2.12
TNFRSF18-201ENST00000328596 AMOTQ4VCS5 1084 aa28.32■■■□□ 2.12
TNFRSF18-201ENST00000328596 PAPPAQ13219 1627 aa28.32■■■□□ 2.12
TNFRSF18-201ENST00000328596 DIAPH1O60610 1272 aaKnown RBP28.31■■■□□ 2.12
TNFRSF18-201ENST00000328596 LY75O60449 1722 aa28.3■■■□□ 2.12
TNFRSF18-201ENST00000328596 ITGB4P16144 1822 aa28.29■■■□□ 2.12
TNFRSF18-201ENST00000328596 KCNQ4P56696 695 aa28.27■■■□□ 2.12
TNFRSF18-201ENST00000328596 PIGBQ92521 554 aa28.27■■■□□ 2.12
TNFRSF18-201ENST00000328596 CCNL1Q9UK58 526 aaPredicted RBP28.27■■■□□ 2.12
TNFRSF18-201ENST00000328596 HSP90AB1P08238 724 aaKnown RBP28.26■■■□□ 2.11
TNFRSF18-201ENST00000328596 ZNF530Q6P9A1 599 aaPredicted RBP28.26■■■□□ 2.11
TNFRSF18-201ENST00000328596 PDGFDQ9GZP0 370 aaPredicted RBP28.26■■■□□ 2.11
TNFRSF18-201ENST00000328596 CASZ1Q86V15 1759 aa28.26■■■□□ 2.11
TNFRSF18-201ENST00000328596 ZNF827Q17R98 1081 aa28.25■■■□□ 2.11
TNFRSF18-201ENST00000328596 SPON1Q9HCB6 807 aa28.25■■■□□ 2.11
TNFRSF18-201ENST00000328596 COL3A1P02461 1466 aaPredicted RBP28.25■■■□□ 2.11
TNFRSF18-201ENST00000328596 PALLDQ8WX93 1383 aa28.24■■■□□ 2.11
TNFRSF18-201ENST00000328596 SMARCC1Q92922 1105 aaPredicted RBP28.24■■■□□ 2.11
TNFRSF18-201ENST00000328596 AKT1S1Q96B36 256 aa28.24■■■□□ 2.11
TNFRSF18-201ENST00000328596 TMOD3Q9NYL9 352 aa28.24■■■□□ 2.11
TNFRSF18-201ENST00000328596 HMOX1P09601 288 aa28.23■■■□□ 2.11
TNFRSF18-201ENST00000328596 DCAF5Q96JK2 942 aa28.23■■■□□ 2.11
TNFRSF18-201ENST00000328596 C1orf141Q5JVX7 400 aa28.22■■■□□ 2.11
TNFRSF18-201ENST00000328596 ERVV-2B6SEH9 535 aa28.2■■■□□ 2.1
TNFRSF18-201ENST00000328596 PPP2R1AP30153 589 aa28.2■■■□□ 2.1
TNFRSF18-201ENST00000328596 CFAP53Q96M91 514 aa28.2■■■□□ 2.1
TNFRSF18-201ENST00000328596 U2SURPO15042 1029 aaKnown RBP28.18■■■□□ 2.1
TNFRSF18-201ENST00000328596 ZBTB7AO95365 584 aa28.18■■■□□ 2.1
TNFRSF18-201ENST00000328596 HMGB2P26583 209 aaKnown RBP28.18■■■□□ 2.1
TNFRSF18-201ENST00000328596 KDM6AO15550 1401 aaPredicted RBP28.18■■■□□ 2.1
TNFRSF18-201ENST00000328596 TFCP2L1Q9NZI6 479 aa28.17■■■□□ 2.1
TNFRSF18-201ENST00000328596 ASAP1Q9ULH1 1129 aa28.16■■■□□ 2.1
TNFRSF18-201ENST00000328596 AKAP4Q5JQC9 854 aa28.14■■■□□ 2.1
TNFRSF18-201ENST00000328596 MTFR1LQ9H019 292 aa28.14■■■□□ 2.1
TNFRSF18-201ENST00000328596 QSER1Q2KHR3 1735 aa28.14■■■□□ 2.1
TNFRSF18-201ENST00000328596 C5P01031 1676 aa28.13■■■□□ 2.09
TNFRSF18-201ENST00000328596 CABP4P57796 275 aa28.13■■■□□ 2.09
TNFRSF18-201ENST00000328596 ATG3Q9NT62 314 aa28.13■■■□□ 2.09
TNFRSF18-201ENST00000328596 ATF5Q9Y2D1 282 aaPredicted RBP28.13■■■□□ 2.09
TNFRSF18-201ENST00000328596 PNPLA7Q6ZV29 1317 aa28.13■■■□□ 2.09
TNFRSF18-201ENST00000328596 LOC102724428A0A0B4J2F2 783 aa28.12■■■□□ 2.09
TNFRSF18-201ENST00000328596 SIK1P57059 783 aa28.12■■■□□ 2.09
TNFRSF18-201ENST00000328596 PPP1R1BQ9UD71 204 aaPredicted RBP28.12■■■□□ 2.09
TNFRSF18-201ENST00000328596 NUDCQ9Y266 331 aa28.11■■■□□ 2.09
TNFRSF18-201ENST00000328596 TAF1LQ8IZX4 1826 aa28.11■■■□□ 2.09
TNFRSF18-201ENST00000328596 PTGER2P43116 358 aa28.1■■■□□ 2.09
TNFRSF18-201ENST00000328596 MTHFSDQ2M296 383 aaKnown RBP28.1■■■□□ 2.09
TNFRSF18-201ENST00000328596 TUBGCP6Q96RT7 1819 aa28.1■■■□□ 2.09
TNFRSF18-201ENST00000328596 DDX10Q13206 875 aaKnown RBP28.09■■■□□ 2.09
TNFRSF18-201ENST00000328596 SLC16A10Q8TF71 515 aa28.09■■■□□ 2.09
TNFRSF18-201ENST00000328596 SCN11AQ9UI33 1791 aa28.07■■■□□ 2.08
TNFRSF18-201ENST00000328596 NFATC2IPQ8NCF5 419 aa28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms