RNA–Protein interactions for RNA: ENST00000328514.11

GINS3-202, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-202ENST00000328514 REC8O95072 547 aa13.79□□□□□ -0.2
GINS3-202ENST00000328514 PRKAR2BP31323 418 aa13.79□□□□□ -0.2
GINS3-202ENST00000328514 RPAP2Q8IXW5 612 aaPredicted RBP13.78□□□□□ -0.2
GINS3-202ENST00000328514 KLHL34Q8N239 644 aa13.78□□□□□ -0.2
GINS3-202ENST00000328514 ZGPATQ8N5A5 531 aaKnown RBP13.78□□□□□ -0.2
GINS3-202ENST00000328514 TSPYL6Q8N831 410 aa13.78□□□□□ -0.2
GINS3-202ENST00000328514 ANKRD44Q8N8A2 993 aa13.78□□□□□ -0.2
GINS3-202ENST00000328514 MCM2P49736 904 aa13.78□□□□□ -0.2
GINS3-202ENST00000328514 RBM27Q9P2N5 1060 aaKnown RBP13.78□□□□□ -0.2
GINS3-202ENST00000328514 CPSF1Q10570 1443 aaKnown RBP13.77□□□□□ -0.2
GINS3-202ENST00000328514 SYCE3A1L190 88 aa13.77□□□□□ -0.21
GINS3-202ENST00000328514 BRD1O95696 1058 aa13.77□□□□□ -0.21
GINS3-202ENST00000328514 SDSP20132 328 aa13.77□□□□□ -0.21
GINS3-202ENST00000328514 PLPPR3Q6T4P5 718 aa13.77□□□□□ -0.21
GINS3-202ENST00000328514 IL17RAQ96F46 866 aa13.77□□□□□ -0.21
GINS3-202ENST00000328514 MBIPQ9NS73 344 aa13.77□□□□□ -0.21
GINS3-202ENST00000328514 RIMS1Q86UR5 1692 aaKnown RBP13.76□□□□□ -0.21
GINS3-202ENST00000328514 MLH3Q9UHC1 1453 aa13.76□□□□□ -0.21
GINS3-202ENST00000328514 GTF2F1P35269 517 aaKnown RBP eCLIP13.76□□□□□ -0.21
GINS3-202ENST00000328514 CUL4AQ13619 759 aa13.76□□□□□ -0.21
GINS3-202ENST00000328514 TWISTNBQ3B726 338 aaPredicted RBP13.76□□□□□ -0.21
GINS3-202ENST00000328514 UTP14CQ5TAP6 766 aaKnown RBP13.76□□□□□ -0.21
GINS3-202ENST00000328514 MYRIPQ8NFW9 859 aa13.76□□□□□ -0.21
GINS3-202ENST00000328514 PRIMPOLQ96LW4 560 aa13.76□□□□□ -0.21
GINS3-202ENST00000328514 SRPK2P78362 688 aaKnown RBP13.76□□□□□ -0.21
GINS3-202ENST00000328514 LMOD3Q0VAK6 560 aa13.76□□□□□ -0.21
GINS3-202ENST00000328514 KIAA2012Q0VF49 1180 aa13.76□□□□□ -0.21
GINS3-202ENST00000328514 UVSSAQ2YD98 709 aa13.76□□□□□ -0.21
GINS3-202ENST00000328514 FAM184AQ8NB25 1140 aa13.76□□□□□ -0.21
GINS3-202ENST00000328514 INTS4Q96HW7 963 aaKnown RBP13.76□□□□□ -0.21
GINS3-202ENST00000328514 CCDC94Q9BW85 323 aaPredicted RBP13.76□□□□□ -0.21
GINS3-202ENST00000328514 OSBPL3Q9H4L5 887 aa13.76□□□□□ -0.21
GINS3-202ENST00000328514 ERC2O15083 957 aa13.75□□□□□ -0.21
GINS3-202ENST00000328514 HDGFL2Q7Z4V5 671 aaPredicted RBP13.75□□□□□ -0.21
GINS3-202ENST00000328514 SYAP1Q96A49 352 aaPredicted RBP13.75□□□□□ -0.21
GINS3-202ENST00000328514 SIGLEC1Q9BZZ2 1709 aa13.75□□□□□ -0.21
GINS3-202ENST00000328514 HMGN5P82970 282 aaKnown RBP13.74□□□□□ -0.21
GINS3-202ENST00000328514 PHACTR3Q96KR7 559 aa13.74□□□□□ -0.21
GINS3-202ENST00000328514 TSPY26PQ9H489 355 aa13.74□□□□□ -0.21
GINS3-202ENST00000328514 POLKQ9UBT6 870 aa13.74□□□□□ -0.21
GINS3-202ENST00000328514 NSFL1CQ9UNZ2 370 aaKnown RBP13.74□□□□□ -0.21
GINS3-202ENST00000328514 ARHGEF40Q8TER5 1519 aa13.74□□□□□ -0.21
GINS3-202ENST00000328514 RGS12O14924 1447 aa13.74□□□□□ -0.21
GINS3-202ENST00000328514 PHF14O94880 888 aa13.74□□□□□ -0.21
GINS3-202ENST00000328514 YTHDC2Q9H6S0 1430 aaKnown RBP13.73□□□□□ -0.21
GINS3-202ENST00000328514 HAP1P54257 671 aaPredicted RBP13.73□□□□□ -0.21
GINS3-202ENST00000328514 CEP85Q6P2H3 762 aa13.73□□□□□ -0.21
GINS3-202ENST00000328514 C16orf71Q8IYS4 520 aaPredicted RBP13.73□□□□□ -0.21
GINS3-202ENST00000328514 CDK12Q9NYV4 1490 aaPredicted RBP13.73□□□□□ -0.21
GINS3-202ENST00000328514 ANAPC15P60006 121 aa13.72□□□□□ -0.21
GINS3-202ENST00000328514 C8orf58Q8NAV2 365 aa13.72□□□□□ -0.21
GINS3-202ENST00000328514 PIBF1Q8WXW3 757 aa13.72□□□□□ -0.21
GINS3-202ENST00000328514 TMX3Q96JJ7 454 aa13.72□□□□□ -0.21
GINS3-202ENST00000328514 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.72□□□□□ -0.21
GINS3-202ENST00000328514 ATP7BP35670 1465 aa13.72□□□□□ -0.21
GINS3-202ENST00000328514 CFAP65Q6ZU64 1925 aaKnown RBP13.72□□□□□ -0.21
GINS3-202ENST00000328514 RTL1A6NKG5 1358 aa13.71□□□□□ -0.21
GINS3-202ENST00000328514 RIMS2Q9UQ26 1411 aa13.71□□□□□ -0.21
GINS3-202ENST00000328514 IL13P35225 146 aa13.71□□□□□ -0.21
GINS3-202ENST00000328514 OTUD7AQ8TE49 926 aaPredicted RBP13.71□□□□□ -0.21
GINS3-202ENST00000328514 POGZQ7Z3K3 1410 aa13.71□□□□□ -0.22
GINS3-202ENST00000328514 DMTNQ08495 405 aa13.7□□□□□ -0.22
GINS3-202ENST00000328514 TMEM87AQ8NBN3 555 aa13.7□□□□□ -0.22
GINS3-202ENST00000328514 THUMPD2Q9BTF0 503 aaKnown RBP13.7□□□□□ -0.22
GINS3-202ENST00000328514 SPTLC3Q9NUV7 552 aa13.7□□□□□ -0.22
GINS3-202ENST00000328514 AATKQ6ZMQ8 1374 aa13.7□□□□□ -0.22
GINS3-202ENST00000328514 EPB41L2O43491 1005 aaKnown RBP13.7□□□□□ -0.22
GINS3-202ENST00000328514 PTPRCP08575 1304 aa13.7□□□□□ -0.22
GINS3-202ENST00000328514 DLG5Q8TDM6 1919 aa13.7□□□□□ -0.22
GINS3-202ENST00000328514 SSH2Q76I76 1423 aa13.7□□□□□ -0.22
GINS3-202ENST00000328514 KIAA0232Q92628 1395 aa13.68□□□□□ -0.22
GINS3-202ENST00000328514 MAP2P11137 1827 aaKnown RBP13.68□□□□□ -0.22
GINS3-202ENST00000328514 TUBGCP6Q96RT7 1819 aa13.68□□□□□ -0.22
GINS3-202ENST00000328514 ELL2O00472 640 aaPredicted RBP13.68□□□□□ -0.22
GINS3-202ENST00000328514 PTMAP06454 111 aaKnown RBP13.68□□□□□ -0.22
GINS3-202ENST00000328514 ZSCAN20P17040 1043 aaPredicted RBP13.68□□□□□ -0.22
GINS3-202ENST00000328514 NEK4P51957 841 aa13.68□□□□□ -0.22
GINS3-202ENST00000328514 SAFB2Q14151 953 aaKnown RBP eCLIP13.68□□□□□ -0.22
GINS3-202ENST00000328514 RNF214Q8ND24 703 aa13.68□□□□□ -0.22
GINS3-202ENST00000328514 PRAM1Q96QH2 718 aa13.68□□□□□ -0.22
GINS3-202ENST00000328514 SLC52A1Q9NWF4 448 aa13.68□□□□□ -0.22
GINS3-202ENST00000328514 LETM1O95202 739 aaPredicted RBP13.67□□□□□ -0.22
GINS3-202ENST00000328514 NOLC1Q14978 699 aaKnown RBP eCLIP13.67□□□□□ -0.22
GINS3-202ENST00000328514 SALL3Q9BXA9 1300 aa13.66□□□□□ -0.22
GINS3-202ENST00000328514 HMMRO75330 724 aa13.66□□□□□ -0.22
GINS3-202ENST00000328514 HMOX1P09601 288 aa13.66□□□□□ -0.22
GINS3-202ENST00000328514 PDE1AP54750 535 aa13.66□□□□□ -0.22
GINS3-202ENST00000328514 FKBP5Q13451 457 aaPredicted RBP13.66□□□□□ -0.22
GINS3-202ENST00000328514 ZNF710Q8N1W2 664 aa13.66□□□□□ -0.22
GINS3-202ENST00000328514 CHAMP1Q96JM3 812 aa13.66□□□□□ -0.22
GINS3-202ENST00000328514 CDK19Q9BWU1 502 aa13.66□□□□□ -0.22
GINS3-202ENST00000328514 CABP1Q9NZU7 370 aa13.66□□□□□ -0.22
GINS3-202ENST00000328514 MINK1Q8N4C8 1332 aaPredicted RBP13.66□□□□□ -0.22
GINS3-202ENST00000328514 PLEKHG5O94827 1062 aa13.66□□□□□ -0.22
GINS3-202ENST00000328514 MCCP23508 829 aa13.66□□□□□ -0.22
GINS3-202ENST00000328514 GGT6Q6P531 493 aa13.66□□□□□ -0.22
GINS3-202ENST00000328514 GTPBP4Q9BZE4 634 aaKnown RBP13.66□□□□□ -0.22
GINS3-202ENST00000328514 DLC1Q96QB1 1528 aa13.66□□□□□ -0.22
GINS3-202ENST00000328514 MSH6P52701 1360 aa13.65□□□□□ -0.22
GINS3-202ENST00000328514 TMEM131LA2VDJ0 1609 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms