RNA–Protein interactions for RNA: ENST00000328392.10

SKP1-201, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-201ENST00000328392 POLMQ9NP87 494 aaPredicted RBP7.76□□□□□ -1.17
SKP1-201ENST00000328392 POM121CA8CG34 1229 aa7.75□□□□□ -1.17
SKP1-201ENST00000328392 ATP5J2-PTCD1G3V325 749 aa7.75□□□□□ -1.17
SKP1-201ENST00000328392 RAD21O60216 631 aa7.75□□□□□ -1.17
SKP1-201ENST00000328392 FOXD4L5Q5VV16 416 aaPredicted RBP7.75□□□□□ -1.17
SKP1-201ENST00000328392 TRAK2O60296 914 aa7.74□□□□□ -1.17
SKP1-201ENST00000328392 SEMA3FQ13275 785 aa7.74□□□□□ -1.17
SKP1-201ENST00000328392 SLFNL1Q499Z3 407 aa7.74□□□□□ -1.17
SKP1-201ENST00000328392 CCDC125Q86Z20 511 aa7.74□□□□□ -1.17
SKP1-201ENST00000328392 RNF135Q8IUD6 432 aa7.74□□□□□ -1.17
SKP1-201ENST00000328392 RNF217Q8TC41 542 aa7.74□□□□□ -1.17
SKP1-201ENST00000328392 A0A1W2PRU2 124 aa7.73□□□□□ -1.17
SKP1-201ENST00000328392 ARID3CA6NKF2 412 aa7.73□□□□□ -1.17
SKP1-201ENST00000328392 H3BM21 787 aa7.73□□□□□ -1.17
SKP1-201ENST00000328392 PIK3CDO00329 1044 aa7.73□□□□□ -1.17
SKP1-201ENST00000328392 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.73□□□□□ -1.176e-7■□□□□ 11.1
SKP1-201ENST00000328392 ERBB4Q15303 1308 aa7.73□□□□□ -1.17
SKP1-201ENST00000328392 MEN1O00255 615 aa7.72□□□□□ -1.17
SKP1-201ENST00000328392 STAU1O95793 577 aaKnown RBP7.72□□□□□ -1.17
SKP1-201ENST00000328392 PTSQ03393 145 aa7.72□□□□□ -1.17
SKP1-201ENST00000328392 ADAMTS19Q8TE59 1207 aa7.72□□□□□ -1.17
SKP1-201ENST00000328392 ALG2Q9H553 416 aa7.72□□□□□ -1.17
SKP1-201ENST00000328392 CHIC2Q9UKJ5 165 aa7.72□□□□□ -1.17
SKP1-201ENST00000328392 DOLKQ9UPQ8 538 aa7.72□□□□□ -1.17
SKP1-201ENST00000328392 PPFIA3O75145 1194 aa7.71□□□□□ -1.18
SKP1-201ENST00000328392 OXLD1Q5BKU9 147 aa7.71□□□□□ -1.18
SKP1-201ENST00000328392 ARID3AQ99856 593 aa7.71□□□□□ -1.18
SKP1-201ENST00000328392 ARHGEF10LQ9HCE6 1279 aa7.71□□□□□ -1.18
SKP1-201ENST00000328392 RAB6BQ9NRW1 208 aa7.71□□□□□ -1.18
SKP1-201ENST00000328392 SOX11P35716 441 aa7.7□□□□□ -1.18
SKP1-201ENST00000328392 PRICKLE2Q7Z3G6 844 aa7.7□□□□□ -1.18
SKP1-201ENST00000328392 CYP2U1Q7Z449 544 aa7.7□□□□□ -1.18
SKP1-201ENST00000328392 SLC16A10Q8TF71 515 aa7.7□□□□□ -1.18
SKP1-201ENST00000328392 ESF1Q9H501 851 aaKnown RBP7.7□□□□□ -1.18
SKP1-201ENST00000328392 MYCP01106 439 aaPredicted RBP7.69□□□□□ -1.18
SKP1-201ENST00000328392 RHOQP17081 205 aa7.69□□□□□ -1.18
SKP1-201ENST00000328392 RNF144AP50876 292 aaPredicted RBP7.69□□□□□ -1.18
SKP1-201ENST00000328392 WWC1Q8IX03 1113 aa7.69□□□□□ -1.18
SKP1-201ENST00000328392 NPAS3Q8IXF0 933 aa7.69□□□□□ -1.18
SKP1-201ENST00000328392 PLPP7Q8NBV4 271 aa7.69□□□□□ -1.18
SKP1-201ENST00000328392 TRIM52Q96A61 297 aa7.69□□□□□ -1.18
SKP1-201ENST00000328392 SENP3-EIF4A1A0A087X0R7 540 aa7.68□□□□□ -1.18
SKP1-201ENST00000328392 SLC35F4A4IF30 521 aa7.68□□□□□ -1.18
SKP1-201ENST00000328392 IL2RAP01589 272 aa7.68□□□□□ -1.18
SKP1-201ENST00000328392 GMPRP36959 345 aa7.68□□□□□ -1.18
SKP1-201ENST00000328392 CLN3Q13286 438 aa7.68□□□□□ -1.18
SKP1-201ENST00000328392 LYSMD3Q7Z3D4 306 aa7.68□□□□□ -1.18
SKP1-201ENST00000328392 FNBP4Q8N3X1 1017 aaPredicted RBP7.68□□□□□ -1.18
SKP1-201ENST00000328392 CCDC155Q8N6L0 562 aa7.68□□□□□ -1.18
SKP1-201ENST00000328392 USP4Q13107 963 aa7.67□□□□□ -1.18
SKP1-201ENST00000328392 HDGFL1Q5TGJ6 251 aa7.67□□□□□ -1.18
SKP1-201ENST00000328392 NLRP3Q96P20 1036 aa7.67□□□□□ -1.18
SKP1-201ENST00000328392 GNRH1P01148 92 aa7.66□□□□□ -1.18
SKP1-201ENST00000328392 SKIP12755 728 aa7.66□□□□□ -1.18
SKP1-201ENST00000328392 PROSER2Q86WR7 435 aaPredicted RBP7.66□□□□□ -1.18
SKP1-201ENST00000328392 IRF7Q92985 503 aa7.66□□□□□ -1.18
SKP1-201ENST00000328392 GRIP2Q9C0E4 1043 aa7.66□□□□□ -1.18
SKP1-201ENST00000328392 POU4F2Q12837 409 aa7.65□□□□□ -1.18
SKP1-201ENST00000328392 MAP7D1Q3KQU3 841 aa7.65□□□□□ -1.18
SKP1-201ENST00000328392 SLC27A3Q5K4L6 730 aa7.65□□□□□ -1.18
SKP1-201ENST00000328392 CNKSR1Q969H4 720 aa7.65□□□□□ -1.18
SKP1-201ENST00000328392 ETNK1Q9HBU6 452 aa7.65□□□□□ -1.18
SKP1-201ENST00000328392 ZNF777Q9ULD5 760 aaPredicted RBP7.65□□□□□ -1.18
SKP1-201ENST00000328392 WIPF1O43516 503 aa7.64□□□□□ -1.19
SKP1-201ENST00000328392 GPC1P35052 558 aa7.64□□□□□ -1.19
SKP1-201ENST00000328392 CENPCQ03188 943 aa7.64□□□□□ -1.19
SKP1-201ENST00000328392 DEPDC4Q8N2C3 294 aa7.64□□□□□ -1.19
SKP1-201ENST00000328392 GPR161Q8N6U8 529 aaKnown RBP7.64□□□□□ -1.19
SKP1-201ENST00000328392 XAGE2Q96GT9 111 aa7.64□□□□□ -1.19
SKP1-201ENST00000328392 UCN2Q96RP3 112 aa7.64□□□□□ -1.19
SKP1-201ENST00000328392 ESYT1Q9BSJ8 1104 aa7.64□□□□□ -1.19
SKP1-201ENST00000328392 HRH3Q9Y5N1 445 aa7.64□□□□□ -1.19
SKP1-201ENST00000328392 VSIG8P0DPA2 414 aa7.63□□□□□ -1.19
SKP1-201ENST00000328392 TBC1D9Q6ZT07 1266 aa7.63□□□□□ -1.19
SKP1-201ENST00000328392 C1orf115Q9H7X2 142 aa7.63□□□□□ -1.19
SKP1-201ENST00000328392 CUEDC1Q9NWM3 386 aaPredicted RBP7.63□□□□□ -1.19
SKP1-201ENST00000328392 A6NJR5 290 aa7.62□□□□□ -1.19
SKP1-201ENST00000328392 ITGA6P23229 1130 aa7.62□□□□□ -1.19
SKP1-201ENST00000328392 SCNN1DP51172 638 aa7.62□□□□□ -1.19
SKP1-201ENST00000328392 NCOA4Q13772 614 aa7.62□□□□□ -1.19
SKP1-201ENST00000328392 VWA5B2Q8N398 1253 aa7.62□□□□□ -1.19
SKP1-201ENST00000328392 FHDC1Q9C0D6 1143 aaPredicted RBP7.62□□□□□ -1.19
SKP1-201ENST00000328392 PCDHGA11Q9Y5H2 935 aa7.62□□□□□ -1.19
SKP1-201ENST00000328392 USP17L5A8MUK1 530 aa7.61□□□□□ -1.19
SKP1-201ENST00000328392 NBPF10Q6P3W6 841 aaKnown RBP7.61□□□□□ -1.19
SKP1-201ENST00000328392 NBPF15Q8N660 670 aa7.61□□□□□ -1.19
SKP1-201ENST00000328392 NFATC2IPQ8NCF5 419 aa7.61□□□□□ -1.19
SKP1-201ENST00000328392 SIRT1Q96EB6 747 aa7.61□□□□□ -1.19
SKP1-201ENST00000328392 GLMNQ92990 594 aa7.6□□□□□ -1.19
SKP1-201ENST00000328392 CDC14CA4D256 554 aa7.59□□□□□ -1.19
SKP1-201ENST00000328392 SPATA31C2B4DYI2 1134 aa7.59□□□□□ -1.19
SKP1-201ENST00000328392 INHAP05111 366 aa7.59□□□□□ -1.19
SKP1-201ENST00000328392 LORP23490 312 aaPredicted RBP7.59□□□□□ -1.19
SKP1-201ENST00000328392 PHKA2P46019 1235 aa7.59□□□□□ -1.19
SKP1-201ENST00000328392 GDF10P55107 478 aa7.59□□□□□ -1.19
SKP1-201ENST00000328392 KRT76Q01546 638 aa7.59□□□□□ -1.19
SKP1-201ENST00000328392 EML3Q32P44 896 aa7.59□□□□□ -1.19
SKP1-201ENST00000328392 ESCO1Q5FWF5 840 aa7.59□□□□□ -1.19
SKP1-201ENST00000328392 NANOS1Q8WY41 292 aaKnown RBP7.59□□□□□ -1.19
SKP1-201ENST00000328392 ZSCAN10Q96SZ4 725 aaPredicted RBP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms