RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 TNNT3P45378 269 aaPredicted RBP13.68□□□□□ -0.22
COL4A5-201ENST00000328300 DBF4Q9UBU7 674 aaPredicted RBP13.68□□□□□ -0.22
COL4A5-201ENST00000328300 HSP90AA2PQ14568 343 aaPredicted RBP13.67□□□□□ -0.22
COL4A5-201ENST00000328300 IGHMBP2P38935 993 aaKnown RBP13.67□□□□□ -0.22
COL4A5-201ENST00000328300 MBD3O95983 291 aa13.67□□□□□ -0.22
COL4A5-201ENST00000328300 ZSCAN31Q96LW9 406 aaPredicted RBP13.67□□□□□ -0.22
COL4A5-201ENST00000328300 CEP89Q96ST8 783 aa13.67□□□□□ -0.22
COL4A5-201ENST00000328300 NPC1L1Q9UHC9 1359 aa13.67□□□□□ -0.22
COL4A5-201ENST00000328300 DNAJC2Q99543 621 aaKnown RBP13.67□□□□□ -0.22
COL4A5-201ENST00000328300 PIK3C2GO75747 1445 aa13.66□□□□□ -0.22
COL4A5-201ENST00000328300 A0A087WZG4 1122 aa13.66□□□□□ -0.22
COL4A5-201ENST00000328300 KIF1BPQ96EK5 621 aa13.66□□□□□ -0.22
COL4A5-201ENST00000328300 ABCA8O94911 1581 aa13.66□□□□□ -0.22
COL4A5-201ENST00000328300 BICD2Q8TD16 824 aa13.66□□□□□ -0.22
COL4A5-201ENST00000328300 ARHGAP45Q92619 1136 aa13.66□□□□□ -0.22
COL4A5-201ENST00000328300 PZPP20742 1482 aa13.66□□□□□ -0.22
COL4A5-201ENST00000328300 RARSP54136 660 aaKnown RBP13.66□□□□□ -0.22
COL4A5-201ENST00000328300 PHF23Q9BUL5 403 aaPredicted RBP13.66□□□□□ -0.22
COL4A5-201ENST00000328300 SRGAP3O43295 1099 aa13.66□□□□□ -0.22
COL4A5-201ENST00000328300 ZFYVE16Q7Z3T8 1539 aa13.66□□□□□ -0.22
COL4A5-201ENST00000328300 EMILIN1Q9Y6C2 1016 aa13.66□□□□□ -0.22
COL4A5-201ENST00000328300 ZNF396Q96N95 335 aaPredicted RBP13.66□□□□□ -0.22
COL4A5-201ENST00000328300 CYP46A1Q9Y6A2 500 aa13.65□□□□□ -0.22
COL4A5-201ENST00000328300 ABCC1P33527 1531 aa13.65□□□□□ -0.22
COL4A5-201ENST00000328300 VPS37CA5D8V6 355 aaPredicted RBP13.65□□□□□ -0.22
COL4A5-201ENST00000328300 DHX8Q14562 1220 aaKnown RBP13.65□□□□□ -0.22
COL4A5-201ENST00000328300 NAT10Q9H0A0 1025 aaKnown RBP13.65□□□□□ -0.22
COL4A5-201ENST00000328300 PARD3Q8TEW0 1356 aa13.65□□□□□ -0.22
COL4A5-201ENST00000328300 PIK3R4Q99570 1358 aa13.65□□□□□ -0.23
COL4A5-201ENST00000328300 C11orf95C9JLR9 678 aaPredicted RBP13.64□□□□□ -0.23
COL4A5-201ENST00000328300 GSE1Q14687 1217 aa13.64□□□□□ -0.23
COL4A5-201ENST00000328300 MAGI2Q86UL8 1455 aa13.64□□□□□ -0.23
COL4A5-201ENST00000328300 FOXO3O43524 673 aa13.64□□□□□ -0.23
COL4A5-201ENST00000328300 CDKL5O76039 1030 aa13.64□□□□□ -0.23
COL4A5-201ENST00000328300 YTHDC2Q9H6S0 1430 aaKnown RBP13.64□□□□□ -0.23
COL4A5-201ENST00000328300 EXOC5O00471 708 aa13.64□□□□□ -0.23
COL4A5-201ENST00000328300 SIRT1Q96EB6 747 aa13.64□□□□□ -0.23
COL4A5-201ENST00000328300 NPATQ14207 1427 aa13.63□□□□□ -0.23
COL4A5-201ENST00000328300 MYL6BP14649 208 aa13.63□□□□□ -0.23
COL4A5-201ENST00000328300 SASS6Q6UVJ0 657 aa13.63□□□□□ -0.23
COL4A5-201ENST00000328300 JMYQ8N9B5 988 aa13.63□□□□□ -0.23
COL4A5-201ENST00000328300 FLT4P35916 1363 aa13.63□□□□□ -0.23
COL4A5-201ENST00000328300 GLRX3O76003 335 aaKnown RBP13.63□□□□□ -0.23
COL4A5-201ENST00000328300 GCC2Q8IWJ2 1684 aa13.63□□□□□ -0.23
COL4A5-201ENST00000328300 XPCQ01831 940 aaPredicted RBP13.63□□□□□ -0.23
COL4A5-201ENST00000328300 AACSQ86V21 672 aa13.63□□□□□ -0.23
COL4A5-201ENST00000328300 IPO7O95373 1038 aaKnown RBP13.62□□□□□ -0.23
COL4A5-201ENST00000328300 C19orf44Q9H6X5 657 aa13.62□□□□□ -0.23
COL4A5-201ENST00000328300 CIZ1Q9ULV3 898 aaPredicted RBP13.62□□□□□ -0.23
COL4A5-201ENST00000328300 TOM1O60784 492 aa13.62□□□□□ -0.23
COL4A5-201ENST00000328300 DNAAF4Q8WXU2 420 aa13.62□□□□□ -0.23
COL4A5-201ENST00000328300 CCDC43Q96MW1 224 aaKnown RBP13.62□□□□□ -0.23
COL4A5-201ENST00000328300 MYO5CQ9NQX4 1742 aa13.62□□□□□ -0.23
COL4A5-201ENST00000328300 PIP4K2AP48426 406 aaPredicted RBP13.62□□□□□ -0.23
COL4A5-201ENST00000328300 FOXD4L5Q5VV16 416 aaPredicted RBP13.62□□□□□ -0.23
COL4A5-201ENST00000328300 FOXD4L4Q8WXT5 416 aaPredicted RBP13.62□□□□□ -0.23
COL4A5-201ENST00000328300 INSRP06213 1382 aa13.62□□□□□ -0.23
COL4A5-201ENST00000328300 TMEM57Q8N5G2 664 aa13.61□□□□□ -0.23
COL4A5-201ENST00000328300 ZNF287Q9HBT7 754 aa13.61□□□□□ -0.23
COL4A5-201ENST00000328300 MCM10Q7L590 875 aa13.61□□□□□ -0.23
COL4A5-201ENST00000328300 TRIM22Q8IYM9 498 aa13.61□□□□□ -0.23
COL4A5-201ENST00000328300 ANKRD24Q8TF21 1146 aa13.61□□□□□ -0.23
COL4A5-201ENST00000328300 COL17A1Q9UMD9 1497 aaPredicted RBP13.61□□□□□ -0.23
COL4A5-201ENST00000328300 PIP4K2BP78356 416 aa13.61□□□□□ -0.23
COL4A5-201ENST00000328300 NCBP3Q53F19 620 aaKnown RBP13.61□□□□□ -0.23
COL4A5-201ENST00000328300 PLEKHH1Q9ULM0 1364 aa13.6□□□□□ -0.23
COL4A5-201ENST00000328300 C1orf115Q9H7X2 142 aa13.6□□□□□ -0.23
COL4A5-201ENST00000328300 NEK4P51957 841 aa13.6□□□□□ -0.23
COL4A5-201ENST00000328300 SSH1Q8WYL5 1049 aa13.6□□□□□ -0.23
COL4A5-201ENST00000328300 RAD21O60216 631 aa13.6□□□□□ -0.23
COL4A5-201ENST00000328300 WASF1Q92558 559 aa13.6□□□□□ -0.23
COL4A5-201ENST00000328300 ZPR1O75312 459 aa13.6□□□□□ -0.23
COL4A5-201ENST00000328300 IFIT1P09914 478 aaKnown RBP13.59□□□□□ -0.23
COL4A5-201ENST00000328300 TXLNAP40222 546 aa13.59□□□□□ -0.23
COL4A5-201ENST00000328300 CCDC70Q6NSX1 233 aa13.59□□□□□ -0.23
COL4A5-201ENST00000328300 NOC3LQ8WTT2 800 aaKnown RBP13.59□□□□□ -0.23
COL4A5-201ENST00000328300 FYB1O15117 783 aa13.59□□□□□ -0.23
COL4A5-201ENST00000328300 OLFM4Q6UX06 510 aa13.59□□□□□ -0.23
COL4A5-201ENST00000328300 BABAM1Q9NWV8 329 aa13.59□□□□□ -0.23
COL4A5-201ENST00000328300 WDR33Q9C0J8 1336 aaKnown RBP13.59□□□□□ -0.23
COL4A5-201ENST00000328300 BACH2Q9BYV9 841 aa13.58□□□□□ -0.23
COL4A5-201ENST00000328300 VSIG10Q8N0Z9 540 aa13.58□□□□□ -0.24
COL4A5-201ENST00000328300 PLXNC1O60486 1568 aa13.58□□□□□ -0.24
COL4A5-201ENST00000328300 SNRPA1P09661 255 aaKnown RBP13.58□□□□□ -0.24
COL4A5-201ENST00000328300 SMARCC1Q92922 1105 aaPredicted RBP13.58□□□□□ -0.24
COL4A5-201ENST00000328300 AKAP4Q5JQC9 854 aa13.58□□□□□ -0.24
COL4A5-201ENST00000328300 MX1P20591 662 aa13.58□□□□□ -0.24
COL4A5-201ENST00000328300 CCDC184Q52MB2 194 aa13.58□□□□□ -0.24
COL4A5-201ENST00000328300 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.57□□□□□ -0.24
COL4A5-201ENST00000328300 SLF2Q8IX21 1173 aa13.57□□□□□ -0.24
COL4A5-201ENST00000328300 EDC4Q6P2E9 1401 aaKnown RBP13.57□□□□□ -0.24
COL4A5-201ENST00000328300 KDM5DQ9BY66 1539 aa13.57□□□□□ -0.24
COL4A5-201ENST00000328300 FAM177BA6PVY3 158 aa13.57□□□□□ -0.24
COL4A5-201ENST00000328300 CREBRFQ8IUR6 639 aa13.57□□□□□ -0.24
COL4A5-201ENST00000328300 K7ELQ4 463 aaPredicted RBP13.57□□□□□ -0.24
COL4A5-201ENST00000328300 FLIIQ13045 1269 aa13.57□□□□□ -0.24
COL4A5-201ENST00000328300 CAVIN4Q5BKX8 364 aa13.57□□□□□ -0.24
COL4A5-201ENST00000328300 BLOC1S2Q6QNY1 142 aa13.57□□□□□ -0.24
COL4A5-201ENST00000328300 CDCA7Q9BWT1 371 aaPredicted RBP13.57□□□□□ -0.24
COL4A5-201ENST00000328300 PES1O00541 588 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 130.9 ms