RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 COL3A1P02461 1466 aaPredicted RBP15.83■□□□□ 0.12
HMGCS1-201ENST00000325110 PKP1Q13835 747 aa15.82■□□□□ 0.12
HMGCS1-201ENST00000325110 ZGPATQ8N5A5 531 aaKnown RBP15.82■□□□□ 0.12
HMGCS1-201ENST00000325110 METP08581 1390 aa15.82■□□□□ 0.12
HMGCS1-201ENST00000325110 CD163L1Q9NR16 1453 aa15.82■□□□□ 0.12
HMGCS1-201ENST00000325110 FSD2A1L4K1 749 aa15.82■□□□□ 0.12
HMGCS1-201ENST00000325110 EIF2S2P20042 333 aaKnown RBP15.82■□□□□ 0.12
HMGCS1-201ENST00000325110 RPAP2Q8IXW5 612 aaPredicted RBP15.82■□□□□ 0.12
HMGCS1-201ENST00000325110 ANKRD44Q8N8A2 993 aa15.82■□□□□ 0.12
HMGCS1-201ENST00000325110 MSH6P52701 1360 aa15.82■□□□□ 0.12
HMGCS1-201ENST00000325110 PIK3C2BO00750 1634 aa15.81■□□□□ 0.12
HMGCS1-201ENST00000325110 MAP4K4O95819 1239 aaPredicted RBP15.81■□□□□ 0.12
HMGCS1-201ENST00000325110 ZNF853P0CG23 659 aa15.81■□□□□ 0.12
HMGCS1-201ENST00000325110 IL1RAPL2Q9NP60 686 aa15.81■□□□□ 0.12
HMGCS1-201ENST00000325110 NLRP6P59044 892 aa15.8■□□□□ 0.12
HMGCS1-201ENST00000325110 NEO1Q92859 1461 aa15.8■□□□□ 0.12
HMGCS1-201ENST00000325110 ADGRB2O60241 1585 aa15.8■□□□□ 0.12
HMGCS1-201ENST00000325110 MSNP26038 577 aaKnown RBP15.8■□□□□ 0.12
HMGCS1-201ENST00000325110 NUCB2P80303 420 aa15.8■□□□□ 0.12
HMGCS1-201ENST00000325110 RNF214Q8ND24 703 aa15.8■□□□□ 0.12
HMGCS1-201ENST00000325110 TTC21BQ7Z4L5 1316 aa15.8■□□□□ 0.12
HMGCS1-201ENST00000325110 CEBPAP49715 358 aaPredicted RBP15.8■□□□□ 0.12
HMGCS1-201ENST00000325110 SIGLEC1Q9BZZ2 1709 aa15.79■□□□□ 0.12
HMGCS1-201ENST00000325110 EDC4Q6P2E9 1401 aaKnown RBP15.79■□□□□ 0.12
HMGCS1-201ENST00000325110 PTMSP20962 102 aa15.79■□□□□ 0.12
HMGCS1-201ENST00000325110 OS9Q13438 667 aaPredicted RBP15.79■□□□□ 0.12
HMGCS1-201ENST00000325110 LMOD2Q6P5Q4 547 aa15.79■□□□□ 0.12
HMGCS1-201ENST00000325110 UPF3BQ9BZI7 483 aaKnown RBP15.79■□□□□ 0.12
HMGCS1-201ENST00000325110 ERC2O15083 957 aa15.79■□□□□ 0.12
HMGCS1-201ENST00000325110 RBM27Q9P2N5 1060 aaKnown RBP15.79■□□□□ 0.12
HMGCS1-201ENST00000325110 MCCP23508 829 aa15.78■□□□□ 0.12
HMGCS1-201ENST00000325110 USP26Q9BXU7 913 aa15.78■□□□□ 0.12
HMGCS1-201ENST00000325110 DIP2CQ9Y2E4 1556 aa15.78■□□□□ 0.12
HMGCS1-201ENST00000325110 GNAI2P04899 355 aa15.78■□□□□ 0.12
HMGCS1-201ENST00000325110 MTHFSDQ2M296 383 aaKnown RBP15.78■□□□□ 0.12
HMGCS1-201ENST00000325110 PRR36Q9H6K5 1346 aa15.78■□□□□ 0.12
HMGCS1-201ENST00000325110 ARHGAP31Q2M1Z3 1444 aa15.78■□□□□ 0.12
HMGCS1-201ENST00000325110 ARHGEF40Q8TER5 1519 aa15.78■□□□□ 0.12
HMGCS1-201ENST00000325110 ALKQ9UM73 1620 aa15.78■□□□□ 0.12
HMGCS1-201ENST00000325110 USHBP1Q8N6Y0 703 aa15.77■□□□□ 0.12
HMGCS1-201ENST00000325110 PTMAP06454 111 aaKnown RBP15.77■□□□□ 0.11
HMGCS1-201ENST00000325110 CFAP74Q9C0B2 1584 aa15.76■□□□□ 0.11
HMGCS1-201ENST00000325110 VIRMAQ69YN4 1812 aaKnown RBP15.76■□□□□ 0.11
HMGCS1-201ENST00000325110 PLCB2Q00722 1185 aa15.76■□□□□ 0.11
HMGCS1-201ENST00000325110 BRPF1P55201 1214 aaPredicted RBP15.76■□□□□ 0.11
HMGCS1-201ENST00000325110 USP32Q8NFA0 1604 aa15.76■□□□□ 0.11
HMGCS1-201ENST00000325110 CHL1O00533 1208 aa15.76■□□□□ 0.11
HMGCS1-201ENST00000325110 MPNDQ8N594 471 aa15.76■□□□□ 0.11
HMGCS1-201ENST00000325110 PTCH1Q13635 1447 aa15.75■□□□□ 0.11
HMGCS1-201ENST00000325110 RBM33Q96EV2 1170 aaKnown RBP15.75■□□□□ 0.11
HMGCS1-201ENST00000325110 ARID3AQ99856 593 aa15.75■□□□□ 0.11
HMGCS1-201ENST00000325110 LARP6Q9BRS8 491 aaKnown RBP15.75■□□□□ 0.11
HMGCS1-201ENST00000325110 NUTM1Q86Y26 1132 aa15.74■□□□□ 0.11
HMGCS1-201ENST00000325110 LRRCC1Q9C099 1032 aa15.74■□□□□ 0.11
HMGCS1-201ENST00000325110 DTNBO60941 627 aa15.74■□□□□ 0.11
HMGCS1-201ENST00000325110 PDE1AP54750 535 aa15.74■□□□□ 0.11
HMGCS1-201ENST00000325110 EID1Q9Y6B2 187 aa15.74■□□□□ 0.11
HMGCS1-201ENST00000325110 LRRFIP2Q9Y608 721 aaKnown RBP15.74■□□□□ 0.11
HMGCS1-201ENST00000325110 MAP3K19Q56UN5 1328 aa15.74■□□□□ 0.11
HMGCS1-201ENST00000325110 CLCN1P35523 988 aa15.73■□□□□ 0.11
HMGCS1-201ENST00000325110 CCT4P50991 539 aaKnown RBP15.73■□□□□ 0.11
HMGCS1-201ENST00000325110 GDPD2Q9HCC8 539 aa15.73■□□□□ 0.11
HMGCS1-201ENST00000325110 SURF6O75683 361 aaKnown RBP15.73■□□□□ 0.11
HMGCS1-201ENST00000325110 FLIIQ13045 1269 aa15.73■□□□□ 0.11
HMGCS1-201ENST00000325110 MYO5BQ9ULV0 1848 aa15.73■□□□□ 0.11
HMGCS1-201ENST00000325110 RTL1A6NKG5 1358 aa15.73■□□□□ 0.11
HMGCS1-201ENST00000325110 KLHL40Q2TBA0 621 aa15.73■□□□□ 0.11
HMGCS1-201ENST00000325110 PTPRCP08575 1304 aa15.73■□□□□ 0.11
HMGCS1-201ENST00000325110 SYCE3A1L190 88 aa15.72■□□□□ 0.11
HMGCS1-201ENST00000325110 UBTFL1P0CB47 393 aaPredicted RBP15.72■□□□□ 0.11
HMGCS1-201ENST00000325110 MED14O60244 1454 aa15.72■□□□□ 0.11
HMGCS1-201ENST00000325110 MX1P20591 662 aa15.72■□□□□ 0.11
HMGCS1-201ENST00000325110 ATP7BP35670 1465 aa15.72■□□□□ 0.11
HMGCS1-201ENST00000325110 HDGFL1Q5TGJ6 251 aa15.72■□□□□ 0.11
HMGCS1-201ENST00000325110 ERBB4Q15303 1308 aa15.71■□□□□ 0.11
HMGCS1-201ENST00000325110 ANXA1P04083 346 aa15.71■□□□□ 0.11
HMGCS1-201ENST00000325110 CCDC30Q5VVM6 783 aa15.71■□□□□ 0.11
HMGCS1-201ENST00000325110 ISY1Q9ULR0 285 aaKnown RBP15.71■□□□□ 0.11
HMGCS1-201ENST00000325110 PNMA6EA0A0J9YXQ4 647 aa15.71■□□□□ 0.1
HMGCS1-201ENST00000325110 GNAI3P08754 354 aa15.71■□□□□ 0.1
HMGCS1-201ENST00000325110 ABTB2Q8N961 1025 aa15.71■□□□□ 0.1
HMGCS1-201ENST00000325110 EYA1Q99502 592 aa15.71■□□□□ 0.1
HMGCS1-201ENST00000325110 ZSCAN23Q3MJ62 389 aa15.7■□□□□ 0.1
HMGCS1-201ENST00000325110 DDIT3P35638 169 aa15.7■□□□□ 0.1
HMGCS1-201ENST00000325110 HSP90AA2PQ14568 343 aaPredicted RBP15.7■□□□□ 0.1
HMGCS1-201ENST00000325110 AMOTL2Q9Y2J4 779 aa15.7■□□□□ 0.1
HMGCS1-201ENST00000325110 A2ML1A8K2U0 1454 aa15.7■□□□□ 0.1
HMGCS1-201ENST00000325110 CPS1P31327 1500 aa15.69■□□□□ 0.1
HMGCS1-201ENST00000325110 CCDC173Q0VFZ6 552 aa15.69■□□□□ 0.1
HMGCS1-201ENST00000325110 TMX3Q96JJ7 454 aa15.69■□□□□ 0.1
HMGCS1-201ENST00000325110 PIK3R4Q99570 1358 aa15.69■□□□□ 0.1
HMGCS1-201ENST00000325110 MAP2P11137 1827 aaKnown RBP15.69■□□□□ 0.1
HMGCS1-201ENST00000325110 KCNJ4P48050 445 aa15.69■□□□□ 0.1
HMGCS1-201ENST00000325110 PRIM1P49642 420 aaKnown RBP15.68■□□□□ 0.1
HMGCS1-201ENST00000325110 KIAA1211Q6ZU35 1233 aa15.68■□□□□ 0.1
HMGCS1-201ENST00000325110 DDX54Q8TDD1 881 aaKnown RBP15.68■□□□□ 0.1
HMGCS1-201ENST00000325110 CWC22Q9HCG8 908 aaKnown RBP15.68■□□□□ 0.1
HMGCS1-201ENST00000325110 ROBO2Q9HCK4 1378 aa15.68■□□□□ 0.1
HMGCS1-201ENST00000325110 CDK12Q9NYV4 1490 aaPredicted RBP15.68■□□□□ 0.1
HMGCS1-201ENST00000325110 TMEM131LA2VDJ0 1609 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms