RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-223ENST00000324771 NINLQ9Y2I6 1382 aa14.36□□□□□ -0.11
DDR1-223ENST00000324771 ADAMTS2O95450 1211 aa14.36□□□□□ -0.11
DDR1-223ENST00000324771 ANKRD24Q8TF21 1146 aa14.36□□□□□ -0.11
DDR1-223ENST00000324771 ATP5J2-PTCD1G3V325 749 aa14.36□□□□□ -0.11
DDR1-223ENST00000324771 TRAK2O60296 914 aa14.36□□□□□ -0.11
DDR1-223ENST00000324771 TBC1D2Q9BYX2 928 aa14.36□□□□□ -0.11
DDR1-223ENST00000324771 G2E3Q7L622 706 aa14.35□□□□□ -0.11
DDR1-223ENST00000324771 FAM184AQ8NB25 1140 aa14.35□□□□□ -0.11
DDR1-223ENST00000324771 RNF214Q8ND24 703 aa14.35□□□□□ -0.11
DDR1-223ENST00000324771 SPG7Q9UQ90 795 aa14.35□□□□□ -0.11
DDR1-223ENST00000324771 H3BQV1 296 aa14.35□□□□□ -0.11
DDR1-223ENST00000324771 IFFO2Q5TF58 517 aa14.35□□□□□ -0.11
DDR1-223ENST00000324771 STK11IPQ8N1F8 1099 aa14.35□□□□□ -0.11
DDR1-223ENST00000324771 UBE2Q2Q8WVN8 375 aa14.35□□□□□ -0.11
DDR1-223ENST00000324771 PODXL2Q9NZ53 605 aa14.35□□□□□ -0.11
DDR1-223ENST00000324771 ARHGEF5Q12774 1597 aa14.35□□□□□ -0.11
DDR1-223ENST00000324771 C8orf34Q49A92 452 aa14.35□□□□□ -0.11
DDR1-223ENST00000324771 CNTROBQ8N137 903 aa14.35□□□□□ -0.11
DDR1-223ENST00000324771 CCDC8Q9H0W5 538 aaPredicted RBP14.35□□□□□ -0.11
DDR1-223ENST00000324771 MRPL50Q8N5N7 158 aaKnown RBP14.34□□□□□ -0.11
DDR1-223ENST00000324771 SMC3Q9UQE7 1217 aa14.34□□□□□ -0.11
DDR1-223ENST00000324771 A0A0U1RQG5 324 aaPredicted RBP14.34□□□□□ -0.11
DDR1-223ENST00000324771 ABCC1P33527 1531 aa14.33□□□□□ -0.11
DDR1-223ENST00000324771 IL13P35225 146 aa14.33□□□□□ -0.12
DDR1-223ENST00000324771 FBXW7Q969H0 707 aa14.33□□□□□ -0.12
DDR1-223ENST00000324771 MYD88Q99836 296 aa14.33□□□□□ -0.12
DDR1-223ENST00000324771 MYO5CQ9NQX4 1742 aa14.33□□□□□ -0.12
DDR1-223ENST00000324771 STK3Q13188 491 aa14.33□□□□□ -0.12
DDR1-223ENST00000324771 MPNDQ8N594 471 aa14.33□□□□□ -0.12
DDR1-223ENST00000324771 EIF2AK4Q9P2K8 1649 aaKnown RBP14.33□□□□□ -0.12
DDR1-223ENST00000324771 PRPF40AO75400 957 aaKnown RBP14.33□□□□□ -0.12
DDR1-223ENST00000324771 BOLA2Q9H3K6 86 aa14.33□□□□□ -0.12
DDR1-223ENST00000324771 CHPF2Q9P2E5 772 aa14.33□□□□□ -0.12
DDR1-223ENST00000324771 TBC1D9Q6ZT07 1266 aa14.32□□□□□ -0.12
DDR1-223ENST00000324771 ADGBQ8N7X0 1667 aa14.32□□□□□ -0.12
DDR1-223ENST00000324771 DNAAF4Q8WXU2 420 aa14.32□□□□□ -0.12
DDR1-223ENST00000324771 CDC42BPAQ5VT25 1732 aa14.32□□□□□ -0.12
DDR1-223ENST00000324771 ZBTB3Q9H5J0 574 aa14.32□□□□□ -0.12
DDR1-223ENST00000324771 METP08581 1390 aa14.32□□□□□ -0.12
DDR1-223ENST00000324771 SF3A1Q15459 793 aaKnown RBP14.31□□□□□ -0.12
DDR1-223ENST00000324771 CAVIN1Q6NZI2 390 aaKnown RBP14.31□□□□□ -0.12
DDR1-223ENST00000324771 MX1P20591 662 aa14.31□□□□□ -0.12
DDR1-223ENST00000324771 PPP1R42Q7Z4L9 355 aa14.31□□□□□ -0.12
DDR1-223ENST00000324771 PHAXQ9H814 394 aaKnown RBP14.31□□□□□ -0.12
DDR1-223ENST00000324771 LRRIQ1Q96JM4 1722 aa14.31□□□□□ -0.12
DDR1-223ENST00000324771 KDM5CP41229 1560 aa14.3□□□□□ -0.12
DDR1-223ENST00000324771 GCP02774 474 aa14.3□□□□□ -0.12
DDR1-223ENST00000324771 RABEP1Q15276 862 aa14.3□□□□□ -0.12
DDR1-223ENST00000324771 SYAP1Q96A49 352 aaPredicted RBP14.3□□□□□ -0.12
DDR1-223ENST00000324771 MAP3K2Q9Y2U5 619 aa14.3□□□□□ -0.12
DDR1-223ENST00000324771 IL16Q14005 1332 aa14.3□□□□□ -0.12
DDR1-223ENST00000324771 K7ELQ4 463 aaPredicted RBP14.3□□□□□ -0.12
DDR1-223ENST00000324771 FKBP4Q02790 459 aaKnown RBP eCLIP14.3□□□□□ -0.12
DDR1-223ENST00000324771 OTUD7AQ8TE49 926 aaPredicted RBP14.3□□□□□ -0.12
DDR1-223ENST00000324771 ZBTB40Q9NUA8 1239 aa14.3□□□□□ -0.12
DDR1-223ENST00000324771 RNF123Q5XPI4 1314 aa14.29□□□□□ -0.12
DDR1-223ENST00000324771 ERVK-7P63135 1459 aa14.29□□□□□ -0.12
DDR1-223ENST00000324771 CHMP4CQ96CF2 233 aa14.29□□□□□ -0.12
DDR1-223ENST00000324771 PRDM15P57071 1507 aaPredicted RBP14.29□□□□□ -0.12
DDR1-223ENST00000324771 NUCB2P80303 420 aa14.29□□□□□ -0.12
DDR1-223ENST00000324771 VPS37DQ86XT2 251 aa14.29□□□□□ -0.12
DDR1-223ENST00000324771 PUS7Q96PZ0 661 aaKnown RBP14.29□□□□□ -0.12
DDR1-223ENST00000324771 ZCCHC11Q5TAX3 1644 aaKnown RBP14.29□□□□□ -0.12
DDR1-223ENST00000324771 LGR6Q9HBX8 967 aa14.29□□□□□ -0.12
DDR1-223ENST00000324771 TBX22Q9Y458 520 aa14.29□□□□□ -0.12
DDR1-223ENST00000324771 FIBPO43427 364 aa14.28□□□□□ -0.12
DDR1-223ENST00000324771 RNF20Q5VTR2 975 aa14.28□□□□□ -0.12
DDR1-223ENST00000324771 PPFIA3O75145 1194 aa14.28□□□□□ -0.12
DDR1-223ENST00000324771 CEBPZQ03701 1054 aaKnown RBP14.28□□□□□ -0.12
DDR1-223ENST00000324771 MTMR7Q9Y216 660 aa14.28□□□□□ -0.12
DDR1-223ENST00000324771 GPTP24298 496 aa14.28□□□□□ -0.12
DDR1-223ENST00000324771 BICDL1Q6ZP65 573 aa14.28□□□□□ -0.12
DDR1-223ENST00000324771 DBF4Q9UBU7 674 aaPredicted RBP14.28□□□□□ -0.12
DDR1-223ENST00000324771 CREBRFQ8IUR6 639 aa14.27□□□□□ -0.12
DDR1-223ENST00000324771 HOXC9P31274 260 aa14.27□□□□□ -0.12
DDR1-223ENST00000324771 UBE3BQ7Z3V4 1068 aa14.27□□□□□ -0.12
DDR1-223ENST00000324771 CPLX1O14810 134 aa14.27□□□□□ -0.13
DDR1-223ENST00000324771 DTNBO60941 627 aa14.27□□□□□ -0.13
DDR1-223ENST00000324771 MCM4P33991 863 aa14.27□□□□□ -0.13
DDR1-223ENST00000324771 NFATC2IPQ8NCF5 419 aa14.27□□□□□ -0.13
DDR1-223ENST00000324771 PA2G4Q9UQ80 394 aaKnown RBP14.27□□□□□ -0.13
DDR1-223ENST00000324771 BCORL1Q5H9F3 1711 aa14.26□□□□□ -0.13
DDR1-223ENST00000324771 PREX2Q70Z35 1606 aa14.26□□□□□ -0.13
DDR1-223ENST00000324771 NPC1L1Q9UHC9 1359 aa14.26□□□□□ -0.13
DDR1-223ENST00000324771 NUCB1Q02818 461 aa14.26□□□□□ -0.13
DDR1-223ENST00000324771 CWF19L2Q2TBE0 894 aaKnown RBP14.26□□□□□ -0.13
DDR1-223ENST00000324771 CNNM1Q9NRU3 951 aa14.26□□□□□ -0.13
DDR1-223ENST00000324771 A0A087WZG4 1122 aa14.26□□□□□ -0.13
DDR1-223ENST00000324771 AMOTQ4VCS5 1084 aa14.26□□□□□ -0.13
DDR1-223ENST00000324771 HDAC1Q13547 482 aaPredicted RBP14.26□□□□□ -0.13
DDR1-223ENST00000324771 MEX3CQ5U5Q3 659 aaKnown RBP14.26□□□□□ -0.13
DDR1-223ENST00000324771 TBC1D32Q96NH3 1257 aa14.26□□□□□ -0.13
DDR1-223ENST00000324771 SDSP20132 328 aa14.25□□□□□ -0.13
DDR1-223ENST00000324771 PTMSP20962 102 aa14.25□□□□□ -0.13
DDR1-223ENST00000324771 BICD2Q8TD16 824 aa14.25□□□□□ -0.13
DDR1-223ENST00000324771 JAKMIP1Q96N16 626 aaKnown RBP14.25□□□□□ -0.13
DDR1-223ENST00000324771 HSP90AA2PQ14568 343 aaPredicted RBP14.25□□□□□ -0.13
DDR1-223ENST00000324771 KIF1BPQ96EK5 621 aa14.25□□□□□ -0.13
DDR1-223ENST00000324771 TSPOAP1O95153 1857 aa14.25□□□□□ -0.13
DDR1-223ENST00000324771 TTC21AQ8NDW8 1320 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 162.7 ms