RNA–Protein interactions for RNA: ENST00000323456.9

MTMR4-201, Transcript of myotubularin related protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTMR4, Length 5,839 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTMR4-201ENST00000323456 RPAP2Q8IXW5 612 aaPredicted RBP12.34□□□□□ -0.43
MTMR4-201ENST00000323456 CCAR2Q8N163 923 aaKnown RBP12.34□□□□□ -0.43
MTMR4-201ENST00000323456 CARD14Q9BXL6 1004 aa12.34□□□□□ -0.43
MTMR4-201ENST00000323456 CYP46A1Q9Y6A2 500 aa12.34□□□□□ -0.43
MTMR4-201ENST00000323456 DHX16O60231 1041 aaKnown RBP12.34□□□□□ -0.43
MTMR4-201ENST00000323456 MPNDQ8N594 471 aa12.33□□□□□ -0.43
MTMR4-201ENST00000323456 ANO8Q9HCE9 1232 aaPredicted RBP12.33□□□□□ -0.43
MTMR4-201ENST00000323456 LRRFIP2Q9Y608 721 aaKnown RBP12.33□□□□□ -0.43
MTMR4-201ENST00000323456 ABCC1P33527 1531 aa12.33□□□□□ -0.44
MTMR4-201ENST00000323456 MX1P20591 662 aa12.33□□□□□ -0.44
MTMR4-201ENST00000323456 CCDC73Q6ZRK6 1079 aa12.33□□□□□ -0.44
MTMR4-201ENST00000323456 FAM43AQ8N2R8 423 aa12.33□□□□□ -0.44
MTMR4-201ENST00000323456 JAKMIP1Q96N16 626 aaKnown RBP12.33□□□□□ -0.44
MTMR4-201ENST00000323456 RRP12Q5JTH9 1297 aaKnown RBP12.33□□□□□ -0.44
MTMR4-201ENST00000323456 NUTM2BA6NNL0 878 aaPredicted RBP12.33□□□□□ -0.44
MTMR4-201ENST00000323456 NUTM2EB1AL46 878 aaPredicted RBP12.33□□□□□ -0.44
MTMR4-201ENST00000323456 NUTM2AQ8IVF1 878 aaPredicted RBP12.33□□□□□ -0.44
MTMR4-201ENST00000323456 PDRG1Q9NUG6 133 aa12.33□□□□□ -0.44
MTMR4-201ENST00000323456 FAM13BQ9NYF5 915 aa12.32□□□□□ -0.44
MTMR4-201ENST00000323456 R3HCC1Q9Y3T6 440 aaKnown RBP12.32□□□□□ -0.44
MTMR4-201ENST00000323456 CCDC158Q5M9N0 1113 aa12.32□□□□□ -0.44
MTMR4-201ENST00000323456 MYD88Q99836 296 aa12.32□□□□□ -0.44
MTMR4-201ENST00000323456 ATP7AQ04656 1500 aa12.32□□□□□ -0.44
MTMR4-201ENST00000323456 TBC1D2Q9BYX2 928 aa12.32□□□□□ -0.44
MTMR4-201ENST00000323456 CCDC39Q9UFE4 941 aa12.32□□□□□ -0.44
MTMR4-201ENST00000323456 CASTP20810 708 aaKnown RBP12.32□□□□□ -0.44
MTMR4-201ENST00000323456 MCM2P49736 904 aa12.32□□□□□ -0.44
MTMR4-201ENST00000323456 FKBP4Q02790 459 aaKnown RBP eCLIP12.32□□□□□ -0.44
MTMR4-201ENST00000323456 GRPEL1Q9HAV7 217 aa12.32□□□□□ -0.44
MTMR4-201ENST00000323456 RIMS2Q9UQ26 1411 aa12.32□□□□□ -0.44
MTMR4-201ENST00000323456 UHRF1BP1Q6BDS2 1440 aa12.31□□□□□ -0.44
MTMR4-201ENST00000323456 MCM4P33991 863 aa12.31□□□□□ -0.44
MTMR4-201ENST00000323456 TAF7Q15545 349 aaPredicted RBP12.31□□□□□ -0.44
MTMR4-201ENST00000323456 CWC22Q9HCG8 908 aaKnown RBP12.31□□□□□ -0.44
MTMR4-201ENST00000323456 SPC24Q8NBT2 197 aa12.31□□□□□ -0.44
MTMR4-201ENST00000323456 LARP6Q9BRS8 491 aaKnown RBP12.3□□□□□ -0.44
MTMR4-201ENST00000323456 TRIM34Q9BYJ4 488 aa12.3□□□□□ -0.44
MTMR4-201ENST00000323456 PCDHB15Q9Y5E8 787 aa12.3□□□□□ -0.44
MTMR4-201ENST00000323456 TNRQ92752 1358 aa12.3□□□□□ -0.44
MTMR4-201ENST00000323456 TPM3P06753 285 aa12.3□□□□□ -0.44
MTMR4-201ENST00000323456 PCMTD1Q96MG8 357 aaPredicted RBP12.3□□□□□ -0.44
MTMR4-201ENST00000323456 TBC1D2BQ9UPU7 963 aa12.3□□□□□ -0.44
MTMR4-201ENST00000323456 A0A1W2PP64 1363 aa12.3□□□□□ -0.44
MTMR4-201ENST00000323456 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.3□□□□□ -0.44
MTMR4-201ENST00000323456 MYO5CQ9NQX4 1742 aa12.3□□□□□ -0.44
MTMR4-201ENST00000323456 AEBP1Q8IUX7 1158 aa12.3□□□□□ -0.44
MTMR4-201ENST00000323456 TBC1D9Q6ZT07 1266 aa12.29□□□□□ -0.44
MTMR4-201ENST00000323456 PHF8Q9UPP1 1060 aa12.29□□□□□ -0.44
MTMR4-201ENST00000323456 NCKAP5LQ9HCH0 1330 aa12.29□□□□□ -0.44
MTMR4-201ENST00000323456 KCNH5Q8NCM2 988 aa12.29□□□□□ -0.44
MTMR4-201ENST00000323456 ZMYM4Q5VZL5 1548 aa12.29□□□□□ -0.44
MTMR4-201ENST00000323456 CCDC173Q0VFZ6 552 aa12.28□□□□□ -0.44
MTMR4-201ENST00000323456 PRDM11Q9NQV5 511 aa12.28□□□□□ -0.44
MTMR4-201ENST00000323456 FOXO3O43524 673 aa12.28□□□□□ -0.44
MTMR4-201ENST00000323456 SSFA2P28290 1259 aa12.28□□□□□ -0.44
MTMR4-201ENST00000323456 SAFBQ15424 915 aaKnown RBP eCLIP12.28□□□□□ -0.44
MTMR4-201ENST00000323456 PRPF40BQ6NWY9 871 aaKnown RBP12.28□□□□□ -0.44
MTMR4-201ENST00000323456 ATP2B1P20020 1258 aa12.28□□□□□ -0.44
MTMR4-201ENST00000323456 HSP90AB2PQ58FF8 381 aa12.28□□□□□ -0.44
MTMR4-201ENST00000323456 MBD3O95983 291 aa12.28□□□□□ -0.44
MTMR4-201ENST00000323456 RLBP1P12271 317 aa12.28□□□□□ -0.44
MTMR4-201ENST00000323456 SAMD1Q6SPF0 538 aaPredicted RBP12.28□□□□□ -0.44
MTMR4-201ENST00000323456 FLIIQ13045 1269 aa12.28□□□□□ -0.44
MTMR4-201ENST00000323456 CCDC57Q2TAC2 916 aa12.28□□□□□ -0.44
MTMR4-201ENST00000323456 SAMD9LQ8IVG5 1584 aa12.27□□□□□ -0.44
MTMR4-201ENST00000323456 C8orf34Q49A92 452 aa12.27□□□□□ -0.44
MTMR4-201ENST00000323456 HOMER1Q86YM7 354 aa12.27□□□□□ -0.44
MTMR4-201ENST00000323456 CCDC8Q9H0W5 538 aaPredicted RBP12.27□□□□□ -0.44
MTMR4-201ENST00000323456 KDM5AP29375 1690 aaKnown RBP12.27□□□□□ -0.44
MTMR4-201ENST00000323456 POLR3AO14802 1390 aaPredicted RBP12.27□□□□□ -0.45
MTMR4-201ENST00000323456 PTPRCP08575 1304 aa12.27□□□□□ -0.45
MTMR4-201ENST00000323456 LETM1O95202 739 aaPredicted RBP12.27□□□□□ -0.45
MTMR4-201ENST00000323456 TPM2P07951 284 aa12.27□□□□□ -0.45
MTMR4-201ENST00000323456 C8orf58Q8NAV2 365 aa12.27□□□□□ -0.45
MTMR4-201ENST00000323456 BOLA2Q9H3K6 86 aa12.27□□□□□ -0.45
MTMR4-201ENST00000323456 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.27□□□□□ -0.45
MTMR4-201ENST00000323456 PIK3C2GO75747 1445 aa12.27□□□□□ -0.45
MTMR4-201ENST00000323456 WDR33Q9C0J8 1336 aaKnown RBP12.27□□□□□ -0.45
MTMR4-201ENST00000323456 MRPL50Q8N5N7 158 aaKnown RBP12.27□□□□□ -0.45
MTMR4-201ENST00000323456 HOOK1Q9UJC3 728 aaKnown RBP12.27□□□□□ -0.45
MTMR4-201ENST00000323456 MAP3K2Q9Y2U5 619 aa12.27□□□□□ -0.45
MTMR4-201ENST00000323456 CCDC83Q8IWF9 413 aa12.27□□□□□ -0.45
MTMR4-201ENST00000323456 UPF3BQ9BZI7 483 aaKnown RBP12.27□□□□□ -0.45
MTMR4-201ENST00000323456 PER1O15534 1290 aaPredicted RBP12.26□□□□□ -0.45
MTMR4-201ENST00000323456 JARID2Q92833 1246 aaPredicted RBP12.26□□□□□ -0.45
MTMR4-201ENST00000323456 TTC21BQ7Z4L5 1316 aa12.26□□□□□ -0.45
MTMR4-201ENST00000323456 ANXA1P04083 346 aa12.26□□□□□ -0.45
MTMR4-201ENST00000323456 NUCB1Q02818 461 aa12.26□□□□□ -0.45
MTMR4-201ENST00000323456 LARP1BQ659C4 914 aaKnown RBP12.26□□□□□ -0.45
MTMR4-201ENST00000323456 KDM5CP41229 1560 aa12.26□□□□□ -0.45
MTMR4-201ENST00000323456 PTCD1O75127 700 aaKnown RBP12.26□□□□□ -0.45
MTMR4-201ENST00000323456 PDILTQ8N807 584 aa12.26□□□□□ -0.45
MTMR4-201ENST00000323456 KIF1BPQ96EK5 621 aa12.26□□□□□ -0.45
MTMR4-201ENST00000323456 SMC2O95347 1197 aa12.26□□□□□ -0.45
MTMR4-201ENST00000323456 TRIM5Q9C035 493 aa12.26□□□□□ -0.45
MTMR4-201ENST00000323456 IL16Q14005 1332 aa12.26□□□□□ -0.45
MTMR4-201ENST00000323456 TPM1P09493 284 aa12.26□□□□□ -0.45
MTMR4-201ENST00000323456 TSR1Q2NL82 804 aaKnown RBP12.26□□□□□ -0.45
MTMR4-201ENST00000323456 SDF4Q9BRK5 362 aa12.26□□□□□ -0.45
MTMR4-201ENST00000323456 RAB11FIP3O75154 756 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms