RNA–Protein interactions for RNA: ENST00000321027.7

GCFC2-201, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCFC2, Length 4,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-201ENST00000321027 NUTM1Q86Y26 1132 aa18.47■□□□□ 0.55
GCFC2-201ENST00000321027 SASS6Q6UVJ0 657 aa18.47■□□□□ 0.55
GCFC2-201ENST00000321027 STRN4Q9NRL3 753 aa18.47■□□□□ 0.55
GCFC2-201ENST00000321027 XRCC6P12956 609 aaKnown RBP eCLIP18.46■□□□□ 0.55
GCFC2-201ENST00000321027 EIF2AK4Q9P2K8 1649 aaKnown RBP18.46■□□□□ 0.55
GCFC2-201ENST00000321027 POLR3AO14802 1390 aaPredicted RBP18.46■□□□□ 0.55
GCFC2-201ENST00000321027 TMX4Q9H1E5 349 aaPredicted RBP18.46■□□□□ 0.55
GCFC2-201ENST00000321027 CWC27Q6UX04 472 aaKnown RBP18.46■□□□□ 0.55
GCFC2-201ENST00000321027 SYNE3Q6ZMZ3 975 aa18.46■□□□□ 0.55
GCFC2-201ENST00000321027 ZRANB1Q9UGI0 708 aa18.46■□□□□ 0.55
GCFC2-201ENST00000321027 GNAT3A8MTJ3 354 aa18.46■□□□□ 0.54
GCFC2-201ENST00000321027 G3V3G9 751 aa18.46■□□□□ 0.54
GCFC2-201ENST00000321027 DCAF8Q5TAQ9 597 aa18.46■□□□□ 0.54
GCFC2-201ENST00000321027 TSHZ3Q63HK5 1081 aa18.46■□□□□ 0.54
GCFC2-201ENST00000321027 SIL1Q9H173 461 aa18.46■□□□□ 0.54
GCFC2-201ENST00000321027 NUCB1Q02818 461 aa18.45■□□□□ 0.54
GCFC2-201ENST00000321027 VPS53Q5VIR6 699 aa18.45■□□□□ 0.54
GCFC2-201ENST00000321027 RIMS2Q9UQ26 1411 aa18.45■□□□□ 0.54
GCFC2-201ENST00000321027 SPC24Q8NBT2 197 aa18.45■□□□□ 0.54
GCFC2-201ENST00000321027 PIK3C2GO75747 1445 aa18.45■□□□□ 0.54
GCFC2-201ENST00000321027 WDR33Q9C0J8 1336 aaKnown RBP18.44■□□□□ 0.54
GCFC2-201ENST00000321027 A0A0U1RQG5 324 aaPredicted RBP18.44■□□□□ 0.54
GCFC2-201ENST00000321027 MAST1Q9Y2H9 1570 aa18.44■□□□□ 0.54
GCFC2-201ENST00000321027 CHMP4CQ96CF2 233 aa18.44■□□□□ 0.54
GCFC2-201ENST00000321027 HSP90AB2PQ58FF8 381 aa18.43■□□□□ 0.54
GCFC2-201ENST00000321027 CEBPZQ03701 1054 aaKnown RBP18.43■□□□□ 0.54
GCFC2-201ENST00000321027 STK3Q13188 491 aa18.43■□□□□ 0.54
GCFC2-201ENST00000321027 TSR1Q2NL82 804 aaKnown RBP18.43■□□□□ 0.54
GCFC2-201ENST00000321027 LRRFIP1Q32MZ4 808 aaKnown RBP18.43■□□□□ 0.54
GCFC2-201ENST00000321027 DDX54Q8TDD1 881 aaKnown RBP18.43■□□□□ 0.54
GCFC2-201ENST00000321027 PRDM11Q9NQV5 511 aa18.43■□□□□ 0.54
GCFC2-201ENST00000321027 TPM2P07951 284 aa18.42■□□□□ 0.54
GCFC2-201ENST00000321027 MX1P20591 662 aa18.42■□□□□ 0.54
GCFC2-201ENST00000321027 ZSCAN30Q86W11 494 aa18.42■□□□□ 0.54
GCFC2-201ENST00000321027 KCNH5Q8NCM2 988 aa18.42■□□□□ 0.54
GCFC2-201ENST00000321027 DNAJC2Q99543 621 aaKnown RBP18.42■□□□□ 0.54
GCFC2-201ENST00000321027 TRIM5Q9C035 493 aa18.42■□□□□ 0.54
GCFC2-201ENST00000321027 TRIM29Q14134 588 aa18.41■□□□□ 0.54
GCFC2-201ENST00000321027 TOM1L2Q6ZVM7 507 aa18.41■□□□□ 0.54
GCFC2-201ENST00000321027 HOMER1Q86YM7 354 aa18.41■□□□□ 0.54
GCFC2-201ENST00000321027 TSPYL6Q8N831 410 aa18.41■□□□□ 0.54
GCFC2-201ENST00000321027 NCKAP5LQ9HCH0 1330 aa18.41■□□□□ 0.54
GCFC2-201ENST00000321027 BTBD11A6QL63 1104 aa18.41■□□□□ 0.54
GCFC2-201ENST00000321027 BAG4O95429 457 aaKnown RBP18.41■□□□□ 0.54
GCFC2-201ENST00000321027 TRDNQ13061 729 aa18.41■□□□□ 0.54
GCFC2-201ENST00000321027 CCDC73Q6ZRK6 1079 aa18.41■□□□□ 0.54
GCFC2-201ENST00000321027 LARP6Q9BRS8 491 aaKnown RBP18.41■□□□□ 0.54
GCFC2-201ENST00000321027 POLKQ9UBT6 870 aa18.41■□□□□ 0.54
GCFC2-201ENST00000321027 PSMA5P28066 241 aa18.41■□□□□ 0.54
GCFC2-201ENST00000321027 GDPD2Q9HCC8 539 aa18.41■□□□□ 0.54
GCFC2-201ENST00000321027 CYP46A1Q9Y6A2 500 aa18.41■□□□□ 0.54
GCFC2-201ENST00000321027 IL16Q14005 1332 aa18.4■□□□□ 0.54
GCFC2-201ENST00000321027 ARHGEF5Q12774 1597 aa18.4■□□□□ 0.54
GCFC2-201ENST00000321027 PUS7Q96PZ0 661 aaKnown RBP18.4■□□□□ 0.54
GCFC2-201ENST00000321027 C16orf71Q8IYS4 520 aaPredicted RBP18.4■□□□□ 0.54
GCFC2-201ENST00000321027 C8orf58Q8NAV2 365 aa18.4■□□□□ 0.54
GCFC2-201ENST00000321027 CFAP65Q6ZU64 1925 aaKnown RBP18.4■□□□□ 0.54
GCFC2-201ENST00000321027 TTC21BQ7Z4L5 1316 aa18.39■□□□□ 0.54
GCFC2-201ENST00000321027 MYL6BP14649 208 aa18.39■□□□□ 0.53
GCFC2-201ENST00000321027 JAKMIP1Q96N16 626 aaKnown RBP18.39■□□□□ 0.53
GCFC2-201ENST00000321027 SDF4Q9BRK5 362 aa18.39■□□□□ 0.53
GCFC2-201ENST00000321027 A0A1W2PP64 1363 aa18.39■□□□□ 0.53
GCFC2-201ENST00000321027 TPM1P09493 284 aa18.39■□□□□ 0.53
GCFC2-201ENST00000321027 MEIS3Q99687 375 aa18.38■□□□□ 0.53
GCFC2-201ENST00000321027 ZBTB40Q9NUA8 1239 aa18.38■□□□□ 0.53
GCFC2-201ENST00000321027 FERMT3Q86UX7 667 aa18.38■□□□□ 0.53
GCFC2-201ENST00000321027 PDCP20941 246 aa18.38■□□□□ 0.53
GCFC2-201ENST00000321027 CABP4P57796 275 aa18.38■□□□□ 0.53
GCFC2-201ENST00000321027 WASHC4Q2M389 1173 aa18.38■□□□□ 0.53
GCFC2-201ENST00000321027 LARP1BQ659C4 914 aaKnown RBP18.38■□□□□ 0.53
GCFC2-201ENST00000321027 PHACTR3Q96KR7 559 aa18.38■□□□□ 0.53
GCFC2-201ENST00000321027 PPIP5K1Q6PFW1 1433 aa18.38■□□□□ 0.53
GCFC2-201ENST00000321027 SMC5Q8IY18 1101 aa18.37■□□□□ 0.53
GCFC2-201ENST00000321027 SPG7Q9UQ90 795 aa18.37■□□□□ 0.53
GCFC2-201ENST00000321027 KDM4AO75164 1064 aa18.37■□□□□ 0.53
GCFC2-201ENST00000321027 AACSQ86V21 672 aa18.37■□□□□ 0.53
GCFC2-201ENST00000321027 LRRFIP2Q9Y608 721 aaKnown RBP18.37■□□□□ 0.53
GCFC2-201ENST00000321027 ZMYM3Q14202 1370 aa18.37■□□□□ 0.53
GCFC2-201ENST00000321027 SAMD9LQ8IVG5 1584 aa18.37■□□□□ 0.53
GCFC2-201ENST00000321027 TAF7Q15545 349 aaPredicted RBP18.37■□□□□ 0.53
GCFC2-201ENST00000321027 AEBP1Q8IUX7 1158 aa18.37■□□□□ 0.53
GCFC2-201ENST00000321027 RBM27Q9P2N5 1060 aaKnown RBP18.37■□□□□ 0.53
GCFC2-201ENST00000321027 ADGBQ8N7X0 1667 aa18.36■□□□□ 0.53
GCFC2-201ENST00000321027 TTC22Q5TAA0 569 aa18.36■□□□□ 0.53
GCFC2-201ENST00000321027 CEP89Q96ST8 783 aa18.36■□□□□ 0.53
GCFC2-201ENST00000321027 SDSP20132 328 aa18.36■□□□□ 0.53
GCFC2-201ENST00000321027 KRT24Q2M2I5 525 aa18.36■□□□□ 0.53
GCFC2-201ENST00000321027 NFXL1Q6ZNB6 911 aa18.36■□□□□ 0.53
GCFC2-201ENST00000321027 FMNL2Q96PY5 1086 aa18.36■□□□□ 0.53
GCFC2-201ENST00000321027 RAD21O60216 631 aa18.36■□□□□ 0.53
GCFC2-201ENST00000321027 CASTP20810 708 aaKnown RBP18.35■□□□□ 0.53
GCFC2-201ENST00000321027 ZMYM4Q5VZL5 1548 aa18.35■□□□□ 0.53
GCFC2-201ENST00000321027 YTHDC2Q9H6S0 1430 aaKnown RBP18.35■□□□□ 0.53
GCFC2-201ENST00000321027 LETM1O95202 739 aaPredicted RBP18.35■□□□□ 0.53
GCFC2-201ENST00000321027 MPRIPQ6WCQ1 1025 aa18.35■□□□□ 0.53
GCFC2-201ENST00000321027 BLMP54132 1417 aaPredicted RBP18.35■□□□□ 0.53
GCFC2-201ENST00000321027 ZNF771Q7L3S4 317 aaPredicted RBP18.35■□□□□ 0.53
GCFC2-201ENST00000321027 VAMP4O75379 141 aa18.34■□□□□ 0.53
GCFC2-201ENST00000321027 PDRG1Q9NUG6 133 aa18.34■□□□□ 0.53
GCFC2-201ENST00000321027 UQCRHLA0A096LP55 91 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms