RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 NSD2O96028 1365 aa19.97■□□□□ 0.79
RPP40-201ENST00000319533 SHANK3Q9BYB0 1731 aa19.97■□□□□ 0.79
RPP40-201ENST00000319533 FYB1O15117 783 aa19.97■□□□□ 0.79
RPP40-201ENST00000319533 ZCRB1Q8TBF4 217 aaKnown RBP19.97■□□□□ 0.79
RPP40-201ENST00000319533 SLC16A10Q8TF71 515 aa19.97■□□□□ 0.79
RPP40-201ENST00000319533 MEGF6O75095 1541 aa19.97■□□□□ 0.79
RPP40-201ENST00000319533 RGPD2P0DJD1 1756 aa19.96■□□□□ 0.79
RPP40-201ENST00000319533 PRIM1P49642 420 aaKnown RBP19.96■□□□□ 0.79
RPP40-201ENST00000319533 COL24A1Q17RW2 1714 aa19.96■□□□□ 0.79
RPP40-201ENST00000319533 TMF1P82094 1093 aa19.95■□□□□ 0.78
RPP40-201ENST00000319533 CGNL1Q0VF96 1302 aa19.95■□□□□ 0.78
RPP40-201ENST00000319533 LY75O60449 1722 aa19.94■□□□□ 0.78
RPP40-201ENST00000319533 DOT1LQ8TEK3 1739 aa19.94■□□□□ 0.78
RPP40-201ENST00000319533 NBPF6Q5VWK0 638 aa19.94■□□□□ 0.78
RPP40-201ENST00000319533 NBPF4Q96M43 638 aa19.94■□□□□ 0.78
RPP40-201ENST00000319533 USP47Q96K76 1375 aa19.94■□□□□ 0.78
RPP40-201ENST00000319533 RRS1Q15050 365 aaKnown RBP19.93■□□□□ 0.78
RPP40-201ENST00000319533 PNPLA7Q6ZV29 1317 aa19.93■□□□□ 0.78
RPP40-201ENST00000319533 GGNBP2Q9H3C7 697 aa19.92■□□□□ 0.78
RPP40-201ENST00000319533 KIF24Q5T7B8 1368 aa19.92■□□□□ 0.78
RPP40-201ENST00000319533 SYTL4Q96C24 671 aaPredicted RBP19.91■□□□□ 0.78
RPP40-201ENST00000319533 INSRP06213 1382 aa19.91■□□□□ 0.78
RPP40-201ENST00000319533 TUBGCP6Q96RT7 1819 aa19.9■□□□□ 0.78
RPP40-201ENST00000319533 CDCA8Q53HL2 280 aa19.89■□□□□ 0.77
RPP40-201ENST00000319533 SMG6Q86US8 1419 aaKnown RBP19.89■□□□□ 0.77
RPP40-201ENST00000319533 KCNQ4P56696 695 aa19.88■□□□□ 0.77
RPP40-201ENST00000319533 ZNF784Q8NCA9 323 aaPredicted RBP19.88■□□□□ 0.77
RPP40-201ENST00000319533 TFCP2L1Q9NZI6 479 aa19.88■□□□□ 0.77
RPP40-201ENST00000319533 FLT4P35916 1363 aa19.87■□□□□ 0.77
RPP40-201ENST00000319533 CHD4Q14839 1912 aa19.87■□□□□ 0.77
RPP40-201ENST00000319533 HSP90AB2PQ58FF8 381 aa19.87■□□□□ 0.77
RPP40-201ENST00000319533 USHBP1Q8N6Y0 703 aa19.87■□□□□ 0.77
RPP40-201ENST00000319533 RAPGEF4Q8WZA2 1011 aa19.87■□□□□ 0.77
RPP40-201ENST00000319533 KIF20BQ96Q89 1820 aa19.87■□□□□ 0.77
RPP40-201ENST00000319533 POLD1P28340 1107 aa19.86■□□□□ 0.77
RPP40-201ENST00000319533 CARD14Q9BXL6 1004 aa19.86■□□□□ 0.77
RPP40-201ENST00000319533 CCNL1Q9UK58 526 aaPredicted RBP19.86■□□□□ 0.77
RPP40-201ENST00000319533 TATP17735 454 aaPredicted RBP19.85■□□□□ 0.77
RPP40-201ENST00000319533 NCAPD2Q15021 1401 aa19.84■□□□□ 0.77
RPP40-201ENST00000319533 PCDH11XQ9BZA7 1347 aa19.83■□□□□ 0.77
RPP40-201ENST00000319533 PCDH11YQ9BZA8 1340 aa19.83■□□□□ 0.77
RPP40-201ENST00000319533 HMGB2P26583 209 aaKnown RBP19.81■□□□□ 0.76
RPP40-201ENST00000319533 COL23A1Q86Y22 540 aaPredicted RBP19.81■□□□□ 0.76
RPP40-201ENST00000319533 TIMELESSQ9UNS1 1208 aa19.81■□□□□ 0.76
RPP40-201ENST00000319533 NSD3Q9BZ95 1437 aa19.8■□□□□ 0.76
RPP40-201ENST00000319533 CYP27B1O15528 508 aa19.8■□□□□ 0.76
RPP40-201ENST00000319533 GPR162Q16538 588 aa19.8■□□□□ 0.76
RPP40-201ENST00000319533 EMILIN1Q9Y6C2 1016 aa19.79■□□□□ 0.76
RPP40-201ENST00000319533 PKD1L3Q7Z443 1732 aa19.79■□□□□ 0.76
RPP40-201ENST00000319533 ANKRD26Q9UPS8 1709 aa19.79■□□□□ 0.76
RPP40-201ENST00000319533 GOLGB1Q14789 3259 aaKnown RBP19.78■□□□□ 0.76
RPP40-201ENST00000319533 C5P01031 1676 aa19.78■□□□□ 0.76
RPP40-201ENST00000319533 PALLDQ8WX93 1383 aa19.78■□□□□ 0.76
RPP40-201ENST00000319533 TOGARAM1Q9Y4F4 1720 aa19.77■□□□□ 0.76
RPP40-201ENST00000319533 NKX1-1Q15270 411 aaPredicted RBP19.77■□□□□ 0.76
RPP40-201ENST00000319533 NLGN2Q8NFZ4 835 aa19.77■□□□□ 0.76
RPP40-201ENST00000319533 WASHC2AQ641Q2 1341 aa19.76■□□□□ 0.75
RPP40-201ENST00000319533 TAF1LQ8IZX4 1826 aa19.76■□□□□ 0.75
RPP40-201ENST00000319533 FLAD1Q8NFF5 587 aa19.76■□□□□ 0.75
RPP40-201ENST00000319533 ITGB4P16144 1822 aa19.75■□□□□ 0.75
RPP40-201ENST00000319533 MPRIPQ6WCQ1 1025 aa19.75■□□□□ 0.75
RPP40-201ENST00000319533 KLHL34Q8N239 644 aa19.75■□□□□ 0.75
RPP40-201ENST00000319533 SMARCC1Q92922 1105 aaPredicted RBP19.75■□□□□ 0.75
RPP40-201ENST00000319533 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.74■□□□□ 0.75
RPP40-201ENST00000319533 PIGBQ92521 554 aa19.73■□□□□ 0.75
RPP40-201ENST00000319533 KCNA4P22459 653 aa19.72■□□□□ 0.75
RPP40-201ENST00000319533 CNKSR2Q8WXI2 1034 aa19.72■□□□□ 0.75
RPP40-201ENST00000319533 EYA1Q99502 592 aa19.72■□□□□ 0.75
RPP40-201ENST00000319533 PCGF6Q9BYE7 350 aa19.72■□□□□ 0.75
RPP40-201ENST00000319533 POLKQ9UBT6 870 aa19.72■□□□□ 0.75
RPP40-201ENST00000319533 SPG7Q9UQ90 795 aa19.72■□□□□ 0.75
RPP40-201ENST00000319533 CLSPNQ9HAW4 1339 aa19.72■□□□□ 0.75
RPP40-201ENST00000319533 C4BP0C0L5 1744 aa19.71■□□□□ 0.75
RPP40-201ENST00000319533 MAP2P11137 1827 aaKnown RBP19.71■□□□□ 0.75
RPP40-201ENST00000319533 GRIN3BO60391 1043 aa19.7■□□□□ 0.74
RPP40-201ENST00000319533 YBX3P16989 372 aaKnown RBP eCLIP19.7■□□□□ 0.742e-7■□□□□ 9.6
RPP40-201ENST00000319533 C1QTNF8P60827 252 aa19.7■□□□□ 0.74
RPP40-201ENST00000319533 MSL1Q68DK7 614 aa19.7■□□□□ 0.74
RPP40-201ENST00000319533 CD2APQ9Y5K6 639 aa19.7■□□□□ 0.74
RPP40-201ENST00000319533 PLEKHG2Q9H7P9 1386 aa19.7■□□□□ 0.74
RPP40-201ENST00000319533 PPM1GO15355 546 aaPredicted RBP19.69■□□□□ 0.74
RPP40-201ENST00000319533 PELP1Q8IZL8 1130 aaKnown RBP19.69■□□□□ 0.74
RPP40-201ENST00000319533 AMIGO3Q86WK7 504 aa19.68■□□□□ 0.74
RPP40-201ENST00000319533 UBR3Q6ZT12 1888 aa19.68■□□□□ 0.74
RPP40-201ENST00000319533 AK7Q96M32 723 aa19.67■□□□□ 0.74
RPP40-201ENST00000319533 LOC102724428A0A0B4J2F2 783 aa19.66■□□□□ 0.74
RPP40-201ENST00000319533 PHKG2P15735 406 aa19.66■□□□□ 0.74
RPP40-201ENST00000319533 SIK1P57059 783 aa19.66■□□□□ 0.74
RPP40-201ENST00000319533 SSFA2P28290 1259 aa19.65■□□□□ 0.74
RPP40-201ENST00000319533 EIF4A2Q14240 407 aaKnown RBP19.65■□□□□ 0.74
RPP40-201ENST00000319533 NCBP3Q53F19 620 aaKnown RBP19.65■□□□□ 0.74
RPP40-201ENST00000319533 IFNL2Q8IZJ0 200 aa19.65■□□□□ 0.74
RPP40-201ENST00000319533 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.64■□□□□ 0.73
RPP40-201ENST00000319533 LINC00116Q8NCU8 138 aa19.64■□□□□ 0.73
RPP40-201ENST00000319533 TMOD3Q9NYL9 352 aa19.64■□□□□ 0.73
RPP40-201ENST00000319533 POTEDQ86YR6 584 aa19.63■□□□□ 0.73
RPP40-201ENST00000319533 ASAP1Q9ULH1 1129 aa19.63■□□□□ 0.73
RPP40-201ENST00000319533 ITPK1Q13572 414 aa19.62■□□□□ 0.73
RPP40-201ENST00000319533 IGSF1Q8N6C5 1336 aa19.61■□□□□ 0.73
RPP40-201ENST00000319533 GIGYF1O75420 1035 aaPredicted RBP19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms