RNA–Protein interactions for RNA: ENST00000319223.8

LRRC42-201, Transcript of leucine rich repeat containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC42, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-201ENST00000319223 SHANK3Q9BYB0 1731 aa22.44■■□□□ 1.18
LRRC42-201ENST00000319223 COL3A1P02461 1466 aaPredicted RBP22.43■■□□□ 1.18
LRRC42-201ENST00000319223 RGPD1P0DJD0 1748 aa22.43■■□□□ 1.18
LRRC42-201ENST00000319223 DIAPH1O60610 1272 aaKnown RBP22.42■■□□□ 1.18
LRRC42-201ENST00000319223 BCL9O00512 1426 aa22.41■■□□□ 1.18
LRRC42-201ENST00000319223 SULT6B1Q6IMI4 303 aa22.4■■□□□ 1.18
LRRC42-201ENST00000319223 SBF2Q86WG5 1849 aa22.4■■□□□ 1.18
LRRC42-201ENST00000319223 TNS1Q9HBL0 1735 aaKnown RBP22.4■■□□□ 1.18
LRRC42-201ENST00000319223 SF3B2Q13435 895 aaKnown RBP22.4■■□□□ 1.18
LRRC42-201ENST00000319223 ACSBG1Q96GR2 724 aa22.39■■□□□ 1.17
LRRC42-201ENST00000319223 KCNQ2O43526 872 aa22.38■■□□□ 1.17
LRRC42-201ENST00000319223 CYP27B1O15528 508 aa22.37■■□□□ 1.17
LRRC42-201ENST00000319223 APBA3O96018 575 aa22.37■■□□□ 1.17
LRRC42-201ENST00000319223 HMOX1P09601 288 aa22.37■■□□□ 1.17
LRRC42-201ENST00000319223 PKD1L3Q7Z443 1732 aa22.37■■□□□ 1.17
LRRC42-201ENST00000319223 EN1Q05925 392 aaPredicted RBP22.36■■□□□ 1.17
LRRC42-201ENST00000319223 KDRP35968 1356 aa22.36■■□□□ 1.17
LRRC42-201ENST00000319223 RALBP1Q15311 655 aa22.35■■□□□ 1.17
LRRC42-201ENST00000319223 BAG6P46379 1132 aa22.34■■□□□ 1.17
LRRC42-201ENST00000319223 CFAP53Q96M91 514 aa22.34■■□□□ 1.17
LRRC42-201ENST00000319223 BCL11BQ9C0K0 894 aaPredicted RBP22.34■■□□□ 1.17
LRRC42-201ENST00000319223 PCDH11XQ9BZA7 1347 aa22.34■■□□□ 1.17
LRRC42-201ENST00000319223 PCDH11YQ9BZA8 1340 aa22.34■■□□□ 1.17
LRRC42-201ENST00000319223 U2SURPO15042 1029 aaKnown RBP22.34■■□□□ 1.17
LRRC42-201ENST00000319223 SPG7Q9UQ90 795 aa22.34■■□□□ 1.17
LRRC42-201ENST00000319223 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.33■■□□□ 1.17
LRRC42-201ENST00000319223 EZH2Q15910 746 aaKnown RBP22.31■■□□□ 1.16
LRRC42-201ENST00000319223 CAMKK2Q96RR4 588 aa22.31■■□□□ 1.16
LRRC42-201ENST00000319223 PRKRIP1Q9H875 184 aaPredicted RBP22.31■■□□□ 1.16
LRRC42-201ENST00000319223 NHSQ6T4R5 1651 aa22.3■■□□□ 1.16
LRRC42-201ENST00000319223 PRIM1P49642 420 aaKnown RBP22.3■■□□□ 1.16
LRRC42-201ENST00000319223 PHKG2P15735 406 aa22.29■■□□□ 1.16
LRRC42-201ENST00000319223 PLEKHO1Q53GL0 409 aaPredicted RBP22.29■■□□□ 1.16
LRRC42-201ENST00000319223 DOT1LQ8TEK3 1739 aa22.29■■□□□ 1.16
LRRC42-201ENST00000319223 KAT6BQ8WYB5 2073 aa22.29■■□□□ 1.16
LRRC42-201ENST00000319223 NKX1-1Q15270 411 aaPredicted RBP22.28■■□□□ 1.16
LRRC42-201ENST00000319223 IFNL2Q8IZJ0 200 aa22.28■■□□□ 1.16
LRRC42-201ENST00000319223 SYTL4Q96C24 671 aaPredicted RBP22.28■■□□□ 1.16
LRRC42-201ENST00000319223 MYBBP1AQ9BQG0 1328 aaKnown RBP22.28■■□□□ 1.16
LRRC42-201ENST00000319223 PLEKHG2Q9H7P9 1386 aa22.27■■□□□ 1.16
LRRC42-201ENST00000319223 AMOTQ4VCS5 1084 aa22.26■■□□□ 1.15
LRRC42-201ENST00000319223 ZNF530Q6P9A1 599 aaPredicted RBP22.26■■□□□ 1.15
LRRC42-201ENST00000319223 NUDCQ9Y266 331 aa22.26■■□□□ 1.15
LRRC42-201ENST00000319223 TOGARAM1Q9Y4F4 1720 aa22.25■■□□□ 1.15
LRRC42-201ENST00000319223 PLSCR1O15162 318 aa22.25■■□□□ 1.15
LRRC42-201ENST00000319223 U2AF1L5P0DN76 240 aaPredicted RBP22.25■■□□□ 1.15
LRRC42-201ENST00000319223 U2AF1Q01081 240 aaKnown RBP eCLIP22.25■■□□□ 1.15
LRRC42-201ENST00000319223 BTAF1O14981 1849 aa22.24■■□□□ 1.15
LRRC42-201ENST00000319223 PROM2Q8N271 834 aa22.24■■□□□ 1.15
LRRC42-201ENST00000319223 RSPH6AQ9H0K4 717 aa22.24■■□□□ 1.15
LRRC42-201ENST00000319223 MTHFSDQ2M296 383 aaKnown RBP22.23■■□□□ 1.15
LRRC42-201ENST00000319223 PHACTR3Q96KR7 559 aa22.22■■□□□ 1.15
LRRC42-201ENST00000319223 PRKAR2BP31323 418 aa22.21■■□□□ 1.15
LRRC42-201ENST00000319223 MPRIPQ6WCQ1 1025 aa22.2■■□□□ 1.14
LRRC42-201ENST00000319223 KDM6AO15550 1401 aaPredicted RBP22.19■■□□□ 1.14
LRRC42-201ENST00000319223 RREB1Q92766 1687 aa22.19■■□□□ 1.14
LRRC42-201ENST00000319223 ITGB4P16144 1822 aa22.19■■□□□ 1.14
LRRC42-201ENST00000319223 C1orf141Q5JVX7 400 aa22.19■■□□□ 1.14
LRRC42-201ENST00000319223 TXNRD1Q16881 649 aa22.18■■□□□ 1.14
LRRC42-201ENST00000319223 PIGBQ92521 554 aa22.18■■□□□ 1.14
LRRC42-201ENST00000319223 FCHSD2O94868 740 aa22.17■■□□□ 1.14
LRRC42-201ENST00000319223 AKAP4Q5JQC9 854 aa22.17■■□□□ 1.14
LRRC42-201ENST00000319223 DCAF5Q96JK2 942 aa22.17■■□□□ 1.14
LRRC42-201ENST00000319223 RGPD3A6NKT7 1758 aaPredicted RBP22.17■■□□□ 1.14
LRRC42-201ENST00000319223 RGPD4Q7Z3J3 1758 aa22.17■■□□□ 1.14
LRRC42-201ENST00000319223 NUP188Q5SRE5 1749 aa22.16■■□□□ 1.14
LRRC42-201ENST00000319223 HSP90AB1P08238 724 aaKnown RBP22.16■■□□□ 1.14
LRRC42-201ENST00000319223 LGR6Q9HBX8 967 aa22.16■■□□□ 1.14
LRRC42-201ENST00000319223 KCNQ4P56696 695 aa22.14■■□□□ 1.14
LRRC42-201ENST00000319223 CCDC184Q52MB2 194 aa22.14■■□□□ 1.14
LRRC42-201ENST00000319223 LRRC4BQ9NT99 713 aa22.14■■□□□ 1.13
LRRC42-201ENST00000319223 TMOD3Q9NYL9 352 aa22.14■■□□□ 1.13
LRRC42-201ENST00000319223 ERVV-2B6SEH9 535 aa22.13■■□□□ 1.13
LRRC42-201ENST00000319223 PLEKHF1Q96S99 279 aa22.13■■□□□ 1.13
LRRC42-201ENST00000319223 ANP32CO43423 234 aa22.12■■□□□ 1.13
LRRC42-201ENST00000319223 GAS2L2Q8NHY3 880 aa22.12■■□□□ 1.13
LRRC42-201ENST00000319223 RNMTO43148 476 aaKnown RBP22.11■■□□□ 1.13
LRRC42-201ENST00000319223 ASAP1Q9ULH1 1129 aa22.11■■□□□ 1.13
LRRC42-201ENST00000319223 PSDA5PKW4 1024 aaPredicted RBP22.11■■□□□ 1.13
LRRC42-201ENST00000319223 ANO8Q9HCE9 1232 aaPredicted RBP22.11■■□□□ 1.13
LRRC42-201ENST00000319223 SCN11AQ9UI33 1791 aa22.1■■□□□ 1.13
LRRC42-201ENST00000319223 CABP4P57796 275 aa22.1■■□□□ 1.13
LRRC42-201ENST00000319223 NFATC2IPQ8NCF5 419 aa22.1■■□□□ 1.13
LRRC42-201ENST00000319223 LY75O60449 1722 aa22.1■■□□□ 1.13
LRRC42-201ENST00000319223 ATG3Q9NT62 314 aa22.09■■□□□ 1.13
LRRC42-201ENST00000319223 PALLDQ8WX93 1383 aa22.09■■□□□ 1.13
LRRC42-201ENST00000319223 MAP3K5Q99683 1374 aa22.09■■□□□ 1.13
LRRC42-201ENST00000319223 R3HDM1Q15032 1099 aaKnown RBP22.09■■□□□ 1.13
LRRC42-201ENST00000319223 IL17REQ8NFR9 667 aa22.09■■□□□ 1.13
LRRC42-201ENST00000319223 GNAT3A8MTJ3 354 aa22.08■■□□□ 1.12
LRRC42-201ENST00000319223 ADAMTS7Q9UKP4 1686 aa22.08■■□□□ 1.12
LRRC42-201ENST00000319223 ADAMTS8Q9UP79 889 aa22.07■■□□□ 1.12
LRRC42-201ENST00000319223 VIRMAQ69YN4 1812 aaKnown RBP22.06■■□□□ 1.12
LRRC42-201ENST00000319223 SLC52A2Q9HAB3 445 aa22.06■■□□□ 1.12
LRRC42-201ENST00000319223 CCNL1Q9UK58 526 aaPredicted RBP22.06■■□□□ 1.12
LRRC42-201ENST00000319223 SLC27A3Q5K4L6 730 aa22.06■■□□□ 1.12
LRRC42-201ENST00000319223 NBPF14Q5TI25 921 aa22.06■■□□□ 1.12
LRRC42-201ENST00000319223 WDR43Q15061 677 aaKnown RBP eCLIP22.05■■□□□ 1.12
LRRC42-201ENST00000319223 SMARCC1Q92922 1105 aaPredicted RBP22.05■■□□□ 1.12
LRRC42-201ENST00000319223 PAPPAQ13219 1627 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms