RNA–Protein interactions for RNA: ENST00000318974.13

PTPN6-201, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTPN6, Length 2,245 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-201ENST00000318974 CRBNQ96SW2 442 aa16.3■□□□□ 0.2
PTPN6-201ENST00000318974 NLRP2Q9NX02 1062 aa16.3■□□□□ 0.2
PTPN6-201ENST00000318974 HTATSF1O43719 755 aaKnown RBP16.3■□□□□ 0.2
PTPN6-201ENST00000318974 LAS1LQ9Y4W2 734 aaKnown RBP16.3■□□□□ 0.2
PTPN6-201ENST00000318974 TCERG1O14776 1098 aaKnown RBP16.29■□□□□ 0.2
PTPN6-201ENST00000318974 RGPD5Q99666 1765 aa16.29■□□□□ 0.2
PTPN6-201ENST00000318974 DLG5Q8TDM6 1919 aa16.29■□□□□ 0.2
PTPN6-201ENST00000318974 ZNF853P0CG23 659 aa16.29■□□□□ 0.2
PTPN6-201ENST00000318974 PLEKHO1Q53GL0 409 aaPredicted RBP16.29■□□□□ 0.2
PTPN6-201ENST00000318974 MCM10Q7L590 875 aa16.29■□□□□ 0.2
PTPN6-201ENST00000318974 RGPD2P0DJD1 1756 aa16.28■□□□□ 0.2
PTPN6-201ENST00000318974 LMO7Q8WWI1 1683 aa16.28■□□□□ 0.2
PTPN6-201ENST00000318974 GNAT3A8MTJ3 354 aa16.28■□□□□ 0.2
PTPN6-201ENST00000318974 CT47B1P0C2W7 299 aaPredicted RBP16.28■□□□□ 0.2
PTPN6-201ENST00000318974 AMOTQ4VCS5 1084 aa16.28■□□□□ 0.2
PTPN6-201ENST00000318974 CFAP44Q96MT7 982 aa16.28■□□□□ 0.2
PTPN6-201ENST00000318974 PHLPP1O60346 1717 aa16.28■□□□□ 0.2
PTPN6-201ENST00000318974 EXOSC9Q06265 439 aaKnown RBP16.27■□□□□ 0.2
PTPN6-201ENST00000318974 CERKQ8TCT0 537 aa16.27■□□□□ 0.2
PTPN6-201ENST00000318974 COL16A1Q07092 1604 aaPredicted RBP16.27■□□□□ 0.2
PTPN6-201ENST00000318974 MAP3K5Q99683 1374 aa16.27■□□□□ 0.2
PTPN6-201ENST00000318974 COL22A1Q8NFW1 1626 aaPredicted RBP16.27■□□□□ 0.19
PTPN6-201ENST00000318974 RAPGEF4Q8WZA2 1011 aa16.26■□□□□ 0.19
PTPN6-201ENST00000318974 FAM208AQ9UK61 1670 aaKnown RBP16.26■□□□□ 0.19
PTPN6-201ENST00000318974 WDR17Q8IZU2 1322 aa16.26■□□□□ 0.19
PTPN6-201ENST00000318974 COL5A2P05997 1499 aaPredicted RBP16.25■□□□□ 0.19
PTPN6-201ENST00000318974 MS4A1P11836 297 aa16.25■□□□□ 0.19
PTPN6-201ENST00000318974 MBIPQ9NS73 344 aa16.25■□□□□ 0.19
PTPN6-201ENST00000318974 C20orf194Q5TEA3 1177 aa16.25■□□□□ 0.19
PTPN6-201ENST00000318974 CRB1P82279 1406 aa16.24■□□□□ 0.19
PTPN6-201ENST00000318974 TATP17735 454 aaPredicted RBP16.24■□□□□ 0.19
PTPN6-201ENST00000318974 RARSP54136 660 aaKnown RBP16.24■□□□□ 0.19
PTPN6-201ENST00000318974 ZNF530Q6P9A1 599 aaPredicted RBP16.24■□□□□ 0.19
PTPN6-201ENST00000318974 BCAR3O75815 825 aa16.23■□□□□ 0.19
PTPN6-201ENST00000318974 AKAP4Q5JQC9 854 aa16.23■□□□□ 0.19
PTPN6-201ENST00000318974 TOM1L2Q6ZVM7 507 aa16.23■□□□□ 0.19
PTPN6-201ENST00000318974 ERICH6Q7L0X2 663 aa16.23■□□□□ 0.19
PTPN6-201ENST00000318974 CHL1O00533 1208 aa16.23■□□□□ 0.19
PTPN6-201ENST00000318974 EVA1CP58658 441 aa16.23■□□□□ 0.19
PTPN6-201ENST00000318974 PLEKHG2Q9H7P9 1386 aa16.23■□□□□ 0.19
PTPN6-201ENST00000318974 C1orf141Q5JVX7 400 aa16.22■□□□□ 0.19
PTPN6-201ENST00000318974 IL17REQ8NFR9 667 aa16.22■□□□□ 0.19
PTPN6-201ENST00000318974 STRN4Q9NRL3 753 aa16.22■□□□□ 0.19
PTPN6-201ENST00000318974 ANP32AP39687 249 aaKnown RBP16.21■□□□□ 0.18
PTPN6-201ENST00000318974 CARD10Q9BWT7 1032 aa16.21■□□□□ 0.18
PTPN6-201ENST00000318974 BTG4Q9NY30 223 aa16.21■□□□□ 0.18
PTPN6-201ENST00000318974 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.21■□□□□ 0.18
PTPN6-201ENST00000318974 KDM2BQ8NHM5 1336 aa16.2■□□□□ 0.18
PTPN6-201ENST00000318974 SPG7Q9UQ90 795 aa16.2■□□□□ 0.18
PTPN6-201ENST00000318974 MEGF6O75095 1541 aa16.2■□□□□ 0.18
PTPN6-201ENST00000318974 LARP1Q6PKG0 1096 aaKnown RBP16.19■□□□□ 0.18
PTPN6-201ENST00000318974 CENPQQ7L2Z9 268 aaPredicted RBP16.19■□□□□ 0.18
PTPN6-201ENST00000318974 ZNF428Q96B54 188 aa16.19■□□□□ 0.18
PTPN6-201ENST00000318974 COL14A1Q05707 1796 aaKnown RBP16.19■□□□□ 0.18
PTPN6-201ENST00000318974 TSPYL4Q9UJ04 414 aa16.19■□□□□ 0.18
PTPN6-201ENST00000318974 LRRC37A3O60309 1634 aa16.19■□□□□ 0.18
PTPN6-201ENST00000318974 CEMIPQ8WUJ3 1361 aa16.19■□□□□ 0.18
PTPN6-201ENST00000318974 TAF7Q15545 349 aaPredicted RBP16.18■□□□□ 0.18
PTPN6-201ENST00000318974 BCL2L13Q9BXK5 485 aa16.18■□□□□ 0.18
PTPN6-201ENST00000318974 BABAM1Q9NWV8 329 aa16.18■□□□□ 0.18
PTPN6-201ENST00000318974 VAMP4O75379 141 aa16.17■□□□□ 0.18
PTPN6-201ENST00000318974 ADAMTS2O95450 1211 aa16.17■□□□□ 0.18
PTPN6-201ENST00000318974 TWISTNBQ3B726 338 aaPredicted RBP16.17■□□□□ 0.18
PTPN6-201ENST00000318974 ALDH1L2Q3SY69 923 aa16.17■□□□□ 0.18
PTPN6-201ENST00000318974 TSPYL6Q8N831 410 aa16.17■□□□□ 0.18
PTPN6-201ENST00000318974 LGR6Q9HBX8 967 aa16.17■□□□□ 0.18
PTPN6-201ENST00000318974 RNMTO43148 476 aaKnown RBP16.17■□□□□ 0.18
PTPN6-201ENST00000318974 CANXP27824 592 aaKnown RBP16.17■□□□□ 0.18
PTPN6-201ENST00000318974 MPRIPQ6WCQ1 1025 aa16.17■□□□□ 0.18
PTPN6-201ENST00000318974 C8orf58Q8NAV2 365 aa16.17■□□□□ 0.18
PTPN6-201ENST00000318974 SMC4Q9NTJ3 1288 aa16.17■□□□□ 0.18
PTPN6-201ENST00000318974 MIS18AQ9NYP9 233 aa16.17■□□□□ 0.18
PTPN6-201ENST00000318974 OVOS2A0A0G2JMS6 1433 aa16.16■□□□□ 0.18
PTPN6-201ENST00000318974 NUTM2BA6NNL0 878 aaPredicted RBP16.16■□□□□ 0.18
PTPN6-201ENST00000318974 NUTM2EB1AL46 878 aaPredicted RBP16.16■□□□□ 0.18
PTPN6-201ENST00000318974 PDE4AP27815 886 aa16.16■□□□□ 0.18
PTPN6-201ENST00000318974 NUTM2AQ8IVF1 878 aaPredicted RBP16.16■□□□□ 0.18
PTPN6-201ENST00000318974 SSH1Q8WYL5 1049 aa16.16■□□□□ 0.18
PTPN6-201ENST00000318974 BACH2Q9BYV9 841 aa16.16■□□□□ 0.18
PTPN6-201ENST00000318974 JCADQ9P266 1359 aa16.16■□□□□ 0.18
PTPN6-201ENST00000318974 ELL2O00472 640 aaPredicted RBP16.15■□□□□ 0.18
PTPN6-201ENST00000318974 PDE3AQ14432 1141 aa16.15■□□□□ 0.18
PTPN6-201ENST00000318974 IFNL2Q8IZJ0 200 aa16.15■□□□□ 0.18
PTPN6-201ENST00000318974 FRAT1Q92837 279 aaPredicted RBP16.15■□□□□ 0.18
PTPN6-201ENST00000318974 IL2RBP14784 551 aa16.15■□□□□ 0.18
PTPN6-201ENST00000318974 PHKG2P15735 406 aa16.15■□□□□ 0.18
PTPN6-201ENST00000318974 TEFQ10587 303 aa16.15■□□□□ 0.18
PTPN6-201ENST00000318974 IPO9Q96P70 1041 aaKnown RBP16.15■□□□□ 0.18
PTPN6-201ENST00000318974 NOP58Q9Y2X3 529 aaKnown RBP16.14■□□□□ 0.17
PTPN6-201ENST00000318974 ZCRB1Q8TBF4 217 aaKnown RBP16.13■□□□□ 0.17
PTPN6-201ENST00000318974 HSP90AB1P08238 724 aaKnown RBP16.12■□□□□ 0.17
PTPN6-201ENST00000318974 BRPF1P55201 1214 aaPredicted RBP16.12■□□□□ 0.17
PTPN6-201ENST00000318974 KRT24Q2M2I5 525 aa16.12■□□□□ 0.17
PTPN6-201ENST00000318974 USP35Q9P2H5 1018 aa16.12■□□□□ 0.17
PTPN6-201ENST00000318974 KIF16BQ96L93 1317 aa16.12■□□□□ 0.17
PTPN6-201ENST00000318974 PKD1L3Q7Z443 1732 aa16.12■□□□□ 0.17
PTPN6-201ENST00000318974 PARP4Q9UKK3 1724 aaKnown RBP16.12■□□□□ 0.17
PTPN6-201ENST00000318974 CYP27B1O15528 508 aa16.11■□□□□ 0.17
PTPN6-201ENST00000318974 ZKSCAN2Q63HK3 967 aa16.11■□□□□ 0.17
PTPN6-201ENST00000318974 PCDH11XQ9BZA7 1347 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms