RNA–Protein interactions for RNA: ENST00000317459.10

TRPT1-201, Transcript of tRNA phosphotransferase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRPT1, Length 962 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-201ENST00000317459 ACSBG1Q96GR2 724 aa27.81■■■□□ 2.04
TRPT1-201ENST00000317459 CAMKK2Q96RR4 588 aa27.81■■■□□ 2.04
TRPT1-201ENST00000317459 NCAPD2Q15021 1401 aa27.81■■■□□ 2.04
TRPT1-201ENST00000317459 PARD3Q8TEW0 1356 aa27.8■■■□□ 2.04
TRPT1-201ENST00000317459 MTHFSP49914 203 aa27.79■■■□□ 2.04
TRPT1-201ENST00000317459 PTF1AQ7RTS3 328 aa27.79■■■□□ 2.04
TRPT1-201ENST00000317459 KCNQ2O43526 872 aa27.77■■■□□ 2.04
TRPT1-201ENST00000317459 PCDH11XQ9BZA7 1347 aa27.76■■■□□ 2.03
TRPT1-201ENST00000317459 PCDH11YQ9BZA8 1340 aa27.76■■■□□ 2.03
TRPT1-201ENST00000317459 SHANK3Q9BYB0 1731 aa27.75■■■□□ 2.03
TRPT1-201ENST00000317459 NHSQ6T4R5 1651 aa27.75■■■□□ 2.03
TRPT1-201ENST00000317459 IGSF1Q8N6C5 1336 aa27.75■■■□□ 2.03
TRPT1-201ENST00000317459 PLSCR1O15162 318 aa27.73■■■□□ 2.03
TRPT1-201ENST00000317459 SPG7Q9UQ90 795 aa27.73■■■□□ 2.03
TRPT1-201ENST00000317459 IL13P35225 146 aa27.71■■■□□ 2.03
TRPT1-201ENST00000317459 SYTL4Q96C24 671 aaPredicted RBP27.7■■■□□ 2.02
TRPT1-201ENST00000317459 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.69■■■□□ 2.02
TRPT1-201ENST00000317459 PKD1L3Q7Z443 1732 aa27.69■■■□□ 2.02
TRPT1-201ENST00000317459 RREB1Q92766 1687 aa27.68■■■□□ 2.02
TRPT1-201ENST00000317459 RGPD3A6NKT7 1758 aaPredicted RBP27.68■■■□□ 2.02
TRPT1-201ENST00000317459 RGPD4Q7Z3J3 1758 aa27.68■■■□□ 2.02
TRPT1-201ENST00000317459 KAT6BQ8WYB5 2073 aa27.68■■■□□ 2.02
TRPT1-201ENST00000317459 CYP27B1O15528 508 aa27.68■■■□□ 2.02
TRPT1-201ENST00000317459 PRIM1P49642 420 aaKnown RBP27.68■■■□□ 2.02
TRPT1-201ENST00000317459 DIAPH1O60610 1272 aaKnown RBP27.67■■■□□ 2.02
TRPT1-201ENST00000317459 DOT1LQ8TEK3 1739 aa27.67■■■□□ 2.02
TRPT1-201ENST00000317459 PLEKHG2Q9H7P9 1386 aa27.66■■■□□ 2.02
TRPT1-201ENST00000317459 SULT6B1Q6IMI4 303 aa27.66■■■□□ 2.02
TRPT1-201ENST00000317459 AEBP1Q8IUX7 1158 aa27.66■■■□□ 2.02
TRPT1-201ENST00000317459 NBPF14Q5TI25 921 aa27.65■■■□□ 2.02
TRPT1-201ENST00000317459 NUP188Q5SRE5 1749 aa27.64■■■□□ 2.02
TRPT1-201ENST00000317459 PSDA5PKW4 1024 aaPredicted RBP27.64■■■□□ 2.02
TRPT1-201ENST00000317459 BTAF1O14981 1849 aa27.64■■■□□ 2.01
TRPT1-201ENST00000317459 DDX10Q13206 875 aaKnown RBP27.63■■■□□ 2.01
TRPT1-201ENST00000317459 TXNRD1Q16881 649 aa27.63■■■□□ 2.01
TRPT1-201ENST00000317459 R3HDM1Q15032 1099 aaKnown RBP27.62■■■□□ 2.01
TRPT1-201ENST00000317459 PLEKHO1Q53GL0 409 aaPredicted RBP27.62■■■□□ 2.01
TRPT1-201ENST00000317459 IFNL2Q8IZJ0 200 aa27.62■■■□□ 2.01
TRPT1-201ENST00000317459 CFAP53Q96M91 514 aa27.62■■■□□ 2.01
TRPT1-201ENST00000317459 PPP2R1AP30153 589 aa27.61■■■□□ 2.01
TRPT1-201ENST00000317459 PROM2Q8N271 834 aa27.61■■■□□ 2.01
TRPT1-201ENST00000317459 KDRP35968 1356 aa27.6■■■□□ 2.01
TRPT1-201ENST00000317459 PHKG2P15735 406 aa27.6■■■□□ 2.01
TRPT1-201ENST00000317459 AMOTQ4VCS5 1084 aa27.6■■■□□ 2.01
TRPT1-201ENST00000317459 COL3A1P02461 1466 aaPredicted RBP27.59■■■□□ 2.01
TRPT1-201ENST00000317459 NKX1-1Q15270 411 aaPredicted RBP27.59■■■□□ 2.01
TRPT1-201ENST00000317459 HMOX1P09601 288 aa27.58■■■□□ 2.01
TRPT1-201ENST00000317459 U2SURPO15042 1029 aaKnown RBP27.57■■■□□ 2
TRPT1-201ENST00000317459 ZNF530Q6P9A1 599 aaPredicted RBP27.57■■■□□ 2
TRPT1-201ENST00000317459 MPRIPQ6WCQ1 1025 aa27.56■■■□□ 2
TRPT1-201ENST00000317459 HSP90AB1P08238 724 aaKnown RBP27.53■■■□□ 2
TRPT1-201ENST00000317459 C1orf141Q5JVX7 400 aa27.53■■■□□ 2
TRPT1-201ENST00000317459 TOGARAM1Q9Y4F4 1720 aa27.53■■■□□ 2
TRPT1-201ENST00000317459 ANO8Q9HCE9 1232 aaPredicted RBP27.52■■■□□ 2
TRPT1-201ENST00000317459 SLC27A3Q5K4L6 730 aa27.51■■□□□ 1.99
TRPT1-201ENST00000317459 STK32BQ9NY57 414 aa27.51■■□□□ 1.99
TRPT1-201ENST00000317459 NUDCQ9Y266 331 aa27.51■■□□□ 1.99
TRPT1-201ENST00000317459 TMOD3Q9NYL9 352 aa27.5■■□□□ 1.99
TRPT1-201ENST00000317459 DCAF5Q96JK2 942 aa27.49■■□□□ 1.99
TRPT1-201ENST00000317459 PIGBQ92521 554 aa27.48■■□□□ 1.99
TRPT1-201ENST00000317459 LRRC4BQ9NT99 713 aa27.48■■□□□ 1.99
TRPT1-201ENST00000317459 ITGB4P16144 1822 aa27.47■■□□□ 1.99
TRPT1-201ENST00000317459 RALBP1Q15311 655 aa27.47■■□□□ 1.99
TRPT1-201ENST00000317459 SMARCC1Q92922 1105 aaPredicted RBP27.46■■□□□ 1.99
TRPT1-201ENST00000317459 CCNL1Q9UK58 526 aaPredicted RBP27.46■■□□□ 1.99
TRPT1-201ENST00000317459 PALLDQ8WX93 1383 aa27.46■■□□□ 1.99
TRPT1-201ENST00000317459 ERVV-2B6SEH9 535 aa27.45■■□□□ 1.98
TRPT1-201ENST00000317459 SLC15A2Q16348 729 aa27.45■■□□□ 1.98
TRPT1-201ENST00000317459 LY75O60449 1722 aa27.44■■□□□ 1.98
TRPT1-201ENST00000317459 KCNQ4P56696 695 aa27.44■■□□□ 1.98
TRPT1-201ENST00000317459 AKAP4Q5JQC9 854 aa27.44■■□□□ 1.98
TRPT1-201ENST00000317459 KDM6AO15550 1401 aaPredicted RBP27.43■■□□□ 1.98
TRPT1-201ENST00000317459 U2AF1L5P0DN76 240 aaPredicted RBP27.43■■□□□ 1.98
TRPT1-201ENST00000317459 U2AF1Q01081 240 aaKnown RBP eCLIP27.43■■□□□ 1.98
TRPT1-201ENST00000317459 CABP4P57796 275 aa27.42■■□□□ 1.98
TRPT1-201ENST00000317459 MTHFSDQ2M296 383 aaKnown RBP27.42■■□□□ 1.98
TRPT1-201ENST00000317459 PAPPAQ13219 1627 aa27.41■■□□□ 1.98
TRPT1-201ENST00000317459 PRKAR2BP31323 418 aa27.39■■□□□ 1.98
TRPT1-201ENST00000317459 ZNF827Q17R98 1081 aa27.39■■□□□ 1.98
TRPT1-201ENST00000317459 ZNF316A6NFI3 1004 aaPredicted RBP27.38■■□□□ 1.97
TRPT1-201ENST00000317459 RSPH6AQ9H0K4 717 aa27.38■■□□□ 1.97
TRPT1-201ENST00000317459 ASAP1Q9ULH1 1129 aa27.38■■□□□ 1.97
TRPT1-201ENST00000317459 HMGB2P26583 209 aaKnown RBP27.37■■□□□ 1.97
TRPT1-201ENST00000317459 GAS2L2Q8NHY3 880 aa27.37■■□□□ 1.97
TRPT1-201ENST00000317459 AKT1S1Q96B36 256 aa27.36■■□□□ 1.97
TRPT1-201ENST00000317459 ATG3Q9NT62 314 aa27.36■■□□□ 1.97
TRPT1-201ENST00000317459 MYBBP1AQ9BQG0 1328 aaKnown RBP27.36■■□□□ 1.97
TRPT1-201ENST00000317459 LRP5O75197 1615 aa27.35■■□□□ 1.97
TRPT1-201ENST00000317459 FCHSD2O94868 740 aa27.35■■□□□ 1.97
TRPT1-201ENST00000317459 LOC102724428A0A0B4J2F2 783 aa27.33■■□□□ 1.97
TRPT1-201ENST00000317459 RNMTO43148 476 aaKnown RBP27.33■■□□□ 1.97
TRPT1-201ENST00000317459 SIK1P57059 783 aa27.33■■□□□ 1.97
TRPT1-201ENST00000317459 NFATC2IPQ8NCF5 419 aa27.33■■□□□ 1.97
TRPT1-201ENST00000317459 PDGFDQ9GZP0 370 aaPredicted RBP27.33■■□□□ 1.97
TRPT1-201ENST00000317459 LGR6Q9HBX8 967 aa27.33■■□□□ 1.97
TRPT1-201ENST00000317459 TFCP2L1Q9NZI6 479 aa27.33■■□□□ 1.97
TRPT1-201ENST00000317459 PHACTR3Q96KR7 559 aa27.32■■□□□ 1.96
TRPT1-201ENST00000317459 SCN11AQ9UI33 1791 aa27.32■■□□□ 1.96
TRPT1-201ENST00000317459 CASZ1Q86V15 1759 aa27.31■■□□□ 1.96
TRPT1-201ENST00000317459 SPON1Q9HCB6 807 aa27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms