RNA–Protein interactions for RNA: ENST00000317118.12

PDE4D-202, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 2,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-202ENST00000317118 NUTM2BA6NNL0 878 aaPredicted RBP7.78□□□□□ -1.16
PDE4D-202ENST00000317118 NUTM2EB1AL46 878 aaPredicted RBP7.78□□□□□ -1.16
PDE4D-202ENST00000317118 HMOX1P09601 288 aa7.78□□□□□ -1.16
PDE4D-202ENST00000317118 HNRNPUQ00839 825 aaKnown RBP eCLIP7.78□□□□□ -1.16
PDE4D-202ENST00000317118 AEBP1Q8IUX7 1158 aa7.78□□□□□ -1.16
PDE4D-202ENST00000317118 NUTM2AQ8IVF1 878 aaPredicted RBP7.78□□□□□ -1.16
PDE4D-202ENST00000317118 TCP11L2Q8N4U5 519 aa7.78□□□□□ -1.16
PDE4D-202ENST00000317118 ADAMTS2O95450 1211 aa7.78□□□□□ -1.16
PDE4D-202ENST00000317118 CSB-PGBD3P0DP91 1061 aa7.78□□□□□ -1.16
PDE4D-202ENST00000317118 EVA1CP58658 441 aa7.78□□□□□ -1.16
PDE4D-202ENST00000317118 CCDC146Q8IYE0 955 aa7.78□□□□□ -1.16
PDE4D-202ENST00000317118 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.78□□□□□ -1.16
PDE4D-202ENST00000317118 RGPD2P0DJD1 1756 aa7.77□□□□□ -1.16
PDE4D-202ENST00000317118 APAF1O14727 1248 aa7.77□□□□□ -1.16
PDE4D-202ENST00000317118 NFE2L2Q16236 605 aa7.77□□□□□ -1.16
PDE4D-202ENST00000317118 AMOTQ4VCS5 1084 aa7.77□□□□□ -1.16
PDE4D-202ENST00000317118 NLRP2Q9NX02 1062 aa7.77□□□□□ -1.16
PDE4D-202ENST00000317118 THRAP3Q9Y2W1 955 aaKnown RBP7.77□□□□□ -1.16
PDE4D-202ENST00000317118 ZNF521Q96K83 1311 aa7.77□□□□□ -1.17
PDE4D-202ENST00000317118 TMPOP42166 694 aaKnown RBP7.77□□□□□ -1.17
PDE4D-202ENST00000317118 TOM1L2Q6ZVM7 507 aa7.77□□□□□ -1.17
PDE4D-202ENST00000317118 UNC5CLQ8IV45 518 aa7.77□□□□□ -1.17
PDE4D-202ENST00000317118 PHACTR3Q96KR7 559 aa7.77□□□□□ -1.17
PDE4D-202ENST00000317118 BCL9LQ86UU0 1499 aa7.77□□□□□ -1.17
PDE4D-202ENST00000317118 HTATSF1O43719 755 aaKnown RBP7.76□□□□□ -1.17
PDE4D-202ENST00000317118 PDE3BQ13370 1112 aa7.76□□□□□ -1.17
PDE4D-202ENST00000317118 LARP1Q6PKG0 1096 aaKnown RBP7.76□□□□□ -1.17
PDE4D-202ENST00000317118 GAS2L2Q8NHY3 880 aa7.76□□□□□ -1.17
PDE4D-202ENST00000317118 LMOD3Q0VAK6 560 aa7.76□□□□□ -1.17
PDE4D-202ENST00000317118 VPS72Q15906 364 aa7.76□□□□□ -1.17
PDE4D-202ENST00000317118 NGLY1Q96IV0 654 aa7.76□□□□□ -1.17
PDE4D-202ENST00000317118 PARP4Q9UKK3 1724 aaKnown RBP7.76□□□□□ -1.17
PDE4D-202ENST00000317118 OVOS2A0A0G2JMS6 1433 aa7.76□□□□□ -1.17
PDE4D-202ENST00000317118 DISP2A7MBM2 1401 aa7.76□□□□□ -1.17
PDE4D-202ENST00000317118 TATP17735 454 aaPredicted RBP7.75□□□□□ -1.17
PDE4D-202ENST00000317118 PLEKHO1Q53GL0 409 aaPredicted RBP7.75□□□□□ -1.17
PDE4D-202ENST00000317118 WDR63Q8IWG1 891 aa7.75□□□□□ -1.17
PDE4D-202ENST00000317118 USHBP1Q8N6Y0 703 aa7.75□□□□□ -1.17
PDE4D-202ENST00000317118 RAPGEF4Q8WZA2 1011 aa7.75□□□□□ -1.17
PDE4D-202ENST00000317118 YTHDC1Q96MU7 727 aaKnown RBP7.75□□□□□ -1.17
PDE4D-202ENST00000317118 C8orf37Q96NL8 207 aa7.75□□□□□ -1.17
PDE4D-202ENST00000317118 CDCA7Q9BWT1 371 aaPredicted RBP7.75□□□□□ -1.17
PDE4D-202ENST00000317118 SPINK5Q9NQ38 1064 aaPredicted RBP7.75□□□□□ -1.17
PDE4D-202ENST00000317118 STRN4Q9NRL3 753 aa7.75□□□□□ -1.17
PDE4D-202ENST00000317118 SPATA31A1Q5TZJ5 1347 aa7.75□□□□□ -1.17
PDE4D-202ENST00000317118 SPATA31A5Q5VU36 1347 aa7.75□□□□□ -1.17
PDE4D-202ENST00000317118 SPATA31A7Q8IWB4 1347 aa7.75□□□□□ -1.17
PDE4D-202ENST00000317118 PKD1L3Q7Z443 1732 aa7.75□□□□□ -1.17
PDE4D-202ENST00000317118 MTHFSDQ2M296 383 aaKnown RBP7.75□□□□□ -1.17
PDE4D-202ENST00000317118 MEGF6O75095 1541 aa7.75□□□□□ -1.17
PDE4D-202ENST00000317118 IL2RBP14784 551 aa7.74□□□□□ -1.17
PDE4D-202ENST00000317118 RIPK4P57078 832 aa7.74□□□□□ -1.17
PDE4D-202ENST00000317118 MEX3CQ5U5Q3 659 aaKnown RBP7.74□□□□□ -1.17
PDE4D-202ENST00000317118 BARGINQ6ZT62 677 aa7.74□□□□□ -1.17
PDE4D-202ENST00000317118 WWC1Q8IX03 1113 aa7.74□□□□□ -1.17
PDE4D-202ENST00000317118 TRIM35Q9UPQ4 493 aa7.74□□□□□ -1.17
PDE4D-202ENST00000317118 IL16Q14005 1332 aa7.74□□□□□ -1.17
PDE4D-202ENST00000317118 WNK3Q9BYP7 1800 aa7.74□□□□□ -1.17
PDE4D-202ENST00000317118 USP21Q9UK80 565 aa7.74□□□□□ -1.17
PDE4D-202ENST00000317118 SPG7Q9UQ90 795 aa7.74□□□□□ -1.17
PDE4D-202ENST00000317118 ATRNO75882 1429 aa7.74□□□□□ -1.17
PDE4D-202ENST00000317118 CALD1Q05682 793 aaKnown RBP7.73□□□□□ -1.17
PDE4D-202ENST00000317118 AKAP4Q5JQC9 854 aa7.73□□□□□ -1.17
PDE4D-202ENST00000317118 ADAMTS7Q9UKP4 1686 aa7.73□□□□□ -1.17
PDE4D-202ENST00000317118 PIP4P2Q8N4L2 257 aa7.73□□□□□ -1.17
PDE4D-202ENST00000317118 MAP3K5Q99683 1374 aa7.73□□□□□ -1.17
PDE4D-202ENST00000317118 GNAT3A8MTJ3 354 aa7.72□□□□□ -1.17
PDE4D-202ENST00000317118 TRMT2AQ8IZ69 625 aaKnown RBP7.72□□□□□ -1.17
PDE4D-202ENST00000317118 AFF2P51816 1311 aa7.72□□□□□ -1.17
PDE4D-202ENST00000317118 LRRC37A3O60309 1634 aa7.72□□□□□ -1.17
PDE4D-202ENST00000317118 GOLGA2Q08379 1002 aa7.72□□□□□ -1.17
PDE4D-202ENST00000317118 TRPC5Q9UL62 973 aaPredicted RBP7.72□□□□□ -1.17
PDE4D-202ENST00000317118 RRP7AQ9Y3A4 280 aaKnown RBP7.72□□□□□ -1.17
PDE4D-202ENST00000317118 HSP90AB1P08238 724 aaKnown RBP7.71□□□□□ -1.17
PDE4D-202ENST00000317118 NKX1-1Q15270 411 aaPredicted RBP7.71□□□□□ -1.17
PDE4D-202ENST00000317118 IFNL2Q8IZJ0 200 aa7.71□□□□□ -1.17
PDE4D-202ENST00000317118 ZCRB1Q8TBF4 217 aaKnown RBP7.71□□□□□ -1.17
PDE4D-202ENST00000317118 BABAM1Q9NWV8 329 aa7.71□□□□□ -1.17
PDE4D-202ENST00000317118 PCDH11XQ9BZA7 1347 aa7.71□□□□□ -1.17
PDE4D-202ENST00000317118 PCDH11YQ9BZA8 1340 aa7.71□□□□□ -1.17
PDE4D-202ENST00000317118 CEMIPQ8WUJ3 1361 aa7.71□□□□□ -1.17
PDE4D-202ENST00000317118 DLG5Q8TDM6 1919 aa7.71□□□□□ -1.17
PDE4D-202ENST00000317118 E9PSI1 815 aa7.71□□□□□ -1.18
PDE4D-202ENST00000317118 ONECUT3O60422 494 aaPredicted RBP7.71□□□□□ -1.18
PDE4D-202ENST00000317118 PHKG2P15735 406 aa7.71□□□□□ -1.18
PDE4D-202ENST00000317118 NEUROD2Q15784 382 aa7.71□□□□□ -1.18
PDE4D-202ENST00000317118 ZNF530Q6P9A1 599 aaPredicted RBP7.71□□□□□ -1.18
PDE4D-202ENST00000317118 RTF1Q92541 710 aaKnown RBP7.71□□□□□ -1.18
PDE4D-202ENST00000317118 TNS2Q63HR2 1409 aa7.71□□□□□ -1.18
PDE4D-202ENST00000317118 SHANK3Q9BYB0 1731 aa7.71□□□□□ -1.18
PDE4D-202ENST00000317118 CENPBP07199 599 aaPredicted RBP7.7□□□□□ -1.18
PDE4D-202ENST00000317118 SLFN5Q08AF3 891 aa7.7□□□□□ -1.18
PDE4D-202ENST00000317118 C1orf141Q5JVX7 400 aa7.7□□□□□ -1.18
PDE4D-202ENST00000317118 ZNF772Q68DY9 489 aaPredicted RBP7.7□□□□□ -1.18
PDE4D-202ENST00000317118 THSD7AQ9UPZ6 1657 aa7.7□□□□□ -1.18
PDE4D-202ENST00000317118 GLI3P10071 1580 aa7.7□□□□□ -1.18
PDE4D-202ENST00000317118 ZNF853P0CG23 659 aa7.7□□□□□ -1.18
PDE4D-202ENST00000317118 GJD4Q96KN9 370 aaPredicted RBP7.7□□□□□ -1.18
PDE4D-202ENST00000317118 IFT57Q9NWB7 429 aa7.7□□□□□ -1.18
PDE4D-202ENST00000317118 ZNF219Q9P2Y4 722 aaPredicted RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms