RNA–Protein interactions for RNA: ENST00000316738.11

EFCAB11-201, Transcript of EF-hand calcium binding domain 11, humanhuman

APPRIS P1 TSL 2 BASIC

Gene EFCAB11, Length 3,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-201ENST00000316738 KCNH5Q8NCM2 988 aa14.08□□□□□ -0.16
EFCAB11-201ENST00000316738 HTATSF1O43719 755 aaKnown RBP14.07□□□□□ -0.16
EFCAB11-201ENST00000316738 RGPD2P0DJD1 1756 aa14.07□□□□□ -0.16
EFCAB11-201ENST00000316738 TWISTNBQ3B726 338 aaPredicted RBP14.06□□□□□ -0.16
EFCAB11-201ENST00000316738 MCM10Q7L590 875 aa14.06□□□□□ -0.16
EFCAB11-201ENST00000316738 FTSJ3Q8IY81 847 aaKnown RBP14.06□□□□□ -0.16
EFCAB11-201ENST00000316738 DDX19BQ9UMR2 479 aa14.06□□□□□ -0.16
EFCAB11-201ENST00000316738 VIRMAQ69YN4 1812 aaKnown RBP14.06□□□□□ -0.16
EFCAB11-201ENST00000316738 LMTK3Q96Q04 1460 aa14.06□□□□□ -0.16
EFCAB11-201ENST00000316738 TMEM94Q12767 1356 aa14.06□□□□□ -0.16
EFCAB11-201ENST00000316738 MSH5O43196 834 aa14.06□□□□□ -0.16
EFCAB11-201ENST00000316738 GAS2L2Q8NHY3 880 aa14.05□□□□□ -0.16
EFCAB11-201ENST00000316738 MSH6P52701 1360 aa14.05□□□□□ -0.16
EFCAB11-201ENST00000316738 FOXO3O43524 673 aa14.05□□□□□ -0.16
EFCAB11-201ENST00000316738 C14orf37Q86TY3 774 aa14.05□□□□□ -0.16
EFCAB11-201ENST00000316738 TMEM57Q8N5G2 664 aa14.05□□□□□ -0.16
EFCAB11-201ENST00000316738 ZBTB40Q9NUA8 1239 aa14.05□□□□□ -0.16
EFCAB11-201ENST00000316738 MED1Q15648 1581 aaPredicted RBP14.04□□□□□ -0.16
EFCAB11-201ENST00000316738 LMO7Q8WWI1 1683 aa14.04□□□□□ -0.16
EFCAB11-201ENST00000316738 ABCC4O15439 1325 aa14.04□□□□□ -0.16
EFCAB11-201ENST00000316738 CRYBG1Q9Y4K1 1723 aa14.04□□□□□ -0.16
EFCAB11-201ENST00000316738 ARHGEF25Q86VW2 580 aa14.04□□□□□ -0.16
EFCAB11-201ENST00000316738 HDAC1Q13547 482 aaPredicted RBP14.03□□□□□ -0.16
EFCAB11-201ENST00000316738 GCP02774 474 aa14.02□□□□□ -0.16
EFCAB11-201ENST00000316738 KDM4FA0A1W2PPD8 638 aa14.02□□□□□ -0.17
EFCAB11-201ENST00000316738 KRT28Q7Z3Y7 464 aa14.02□□□□□ -0.17
EFCAB11-201ENST00000316738 RGS12O14924 1447 aa14.02□□□□□ -0.17
EFCAB11-201ENST00000316738 RWDD1Q9H446 243 aaPredicted RBP14.01□□□□□ -0.17
EFCAB11-201ENST00000316738 COL18A1P39060 1754 aa14.01□□□□□ -0.17
EFCAB11-201ENST00000316738 MAP3K5Q99683 1374 aa14.01□□□□□ -0.17
EFCAB11-201ENST00000316738 C8orf34Q49A92 452 aa14.01□□□□□ -0.17
EFCAB11-201ENST00000316738 NBPF6Q5VWK0 638 aa14.01□□□□□ -0.17
EFCAB11-201ENST00000316738 ITPRIPQ8IWB1 547 aa14.01□□□□□ -0.17
EFCAB11-201ENST00000316738 NBPF4Q96M43 638 aa14.01□□□□□ -0.17
EFCAB11-201ENST00000316738 RGPD5Q99666 1765 aa14□□□□□ -0.17
EFCAB11-201ENST00000316738 ZBTB7BO15156 539 aaPredicted RBP14□□□□□ -0.17
EFCAB11-201ENST00000316738 GNAT3A8MTJ3 354 aa14□□□□□ -0.17
EFCAB11-201ENST00000316738 ELL2O00472 640 aaPredicted RBP14□□□□□ -0.17
EFCAB11-201ENST00000316738 HAP1P54257 671 aaPredicted RBP14□□□□□ -0.17
EFCAB11-201ENST00000316738 BABAM1Q9NWV8 329 aa14□□□□□ -0.17
EFCAB11-201ENST00000316738 PXDNQ92626 1479 aa14□□□□□ -0.17
EFCAB11-201ENST00000316738 CEMIPQ8WUJ3 1361 aa14□□□□□ -0.17
EFCAB11-201ENST00000316738 FAM208AQ9UK61 1670 aaKnown RBP13.99□□□□□ -0.17
EFCAB11-201ENST00000316738 KRT24Q2M2I5 525 aa13.99□□□□□ -0.17
EFCAB11-201ENST00000316738 RTF1Q92541 710 aaKnown RBP13.99□□□□□ -0.17
EFCAB11-201ENST00000316738 ADAMTS7Q9UKP4 1686 aa13.99□□□□□ -0.17
EFCAB11-201ENST00000316738 KDM3BQ7LBC6 1761 aa13.99□□□□□ -0.17
EFCAB11-201ENST00000316738 XPCQ01831 940 aaPredicted RBP13.99□□□□□ -0.17
EFCAB11-201ENST00000316738 IL17REQ8NFR9 667 aa13.99□□□□□ -0.17
EFCAB11-201ENST00000316738 ABCC6O95255 1503 aa13.98□□□□□ -0.17
EFCAB11-201ENST00000316738 HSPA2P54652 639 aa13.98□□□□□ -0.17
EFCAB11-201ENST00000316738 FAM161AQ3B820 660 aa13.98□□□□□ -0.17
EFCAB11-201ENST00000316738 ATF3P18847 181 aa13.98□□□□□ -0.17
EFCAB11-201ENST00000316738 API5Q9BZZ5 524 aaKnown RBP13.97□□□□□ -0.17
EFCAB11-201ENST00000316738 CACNA1FO60840 1977 aa13.97□□□□□ -0.17
EFCAB11-201ENST00000316738 CADPS2Q86UW7 1296 aa13.97□□□□□ -0.17
EFCAB11-201ENST00000316738 SMC5Q8IY18 1101 aa13.97□□□□□ -0.17
EFCAB11-201ENST00000316738 LTV1Q96GA3 475 aaPredicted RBP13.97□□□□□ -0.17
EFCAB11-201ENST00000316738 PDZRN3Q9UPQ7 1066 aa13.96□□□□□ -0.17
EFCAB11-201ENST00000316738 USHBP1Q8N6Y0 703 aa13.96□□□□□ -0.17
EFCAB11-201ENST00000316738 SOS1Q07889 1333 aaPredicted RBP13.96□□□□□ -0.17
EFCAB11-201ENST00000316738 N4BP2Q86UW6 1770 aaPredicted RBP13.96□□□□□ -0.17
EFCAB11-201ENST00000316738 INTS3Q68E01 1043 aaKnown RBP13.96□□□□□ -0.18
EFCAB11-201ENST00000316738 SIPA1L3O60292 1781 aaPredicted RBP13.95□□□□□ -0.18
EFCAB11-201ENST00000316738 RGS3P49796 1198 aa13.95□□□□□ -0.18
EFCAB11-201ENST00000316738 CHMP4BQ9H444 224 aaKnown RBP13.95□□□□□ -0.18
EFCAB11-201ENST00000316738 TSPYL4Q9UJ04 414 aa13.95□□□□□ -0.18
EFCAB11-201ENST00000316738 AXIN2Q9Y2T1 843 aa13.95□□□□□ -0.18
EFCAB11-201ENST00000316738 OVOS2A0A0G2JMS6 1433 aa13.95□□□□□ -0.18
EFCAB11-201ENST00000316738 PTPRCP08575 1304 aa13.95□□□□□ -0.18
EFCAB11-201ENST00000316738 MIS18AQ9NYP9 233 aa13.95□□□□□ -0.18
EFCAB11-201ENST00000316738 TNS3Q68CZ2 1445 aa13.95□□□□□ -0.18
EFCAB11-201ENST00000316738 IPO9Q96P70 1041 aaKnown RBP13.94□□□□□ -0.18
EFCAB11-201ENST00000316738 NPHP3Q7Z494 1330 aa13.93□□□□□ -0.18
EFCAB11-201ENST00000316738 TAF7Q15545 349 aaPredicted RBP13.93□□□□□ -0.18
EFCAB11-201ENST00000316738 LRRC59Q96AG4 307 aaKnown RBP13.93□□□□□ -0.18
EFCAB11-201ENST00000316738 ANP32AP39687 249 aaKnown RBP13.93□□□□□ -0.18
EFCAB11-201ENST00000316738 ANKRD24Q8TF21 1146 aa13.93□□□□□ -0.18
EFCAB11-201ENST00000316738 PLEKHG2Q9H7P9 1386 aa13.92□□□□□ -0.18
EFCAB11-201ENST00000316738 ERBB3P21860 1342 aa13.92□□□□□ -0.18
EFCAB11-201ENST00000316738 AKAP4Q5JQC9 854 aa13.92□□□□□ -0.18
EFCAB11-201ENST00000316738 SPATA31A3Q5VYP0 1347 aa13.91□□□□□ -0.18
EFCAB11-201ENST00000316738 AMOTQ4VCS5 1084 aa13.91□□□□□ -0.18
EFCAB11-201ENST00000316738 SIRT2Q8IXJ6 389 aa13.91□□□□□ -0.18
EFCAB11-201ENST00000316738 DDX17Q92841 729 aaKnown RBP13.91□□□□□ -0.18
EFCAB11-201ENST00000316738 CPDO75976 1380 aa13.9□□□□□ -0.18
EFCAB11-201ENST00000316738 SLC4A2P04920 1241 aa13.89□□□□□ -0.19
EFCAB11-201ENST00000316738 NUCB1Q02818 461 aa13.89□□□□□ -0.19
EFCAB11-201ENST00000316738 PLEKHO1Q53GL0 409 aaPredicted RBP13.89□□□□□ -0.19
EFCAB11-201ENST00000316738 BRINP3Q76B58 766 aa13.89□□□□□ -0.19
EFCAB11-201ENST00000316738 ATP10DQ9P241 1426 aa13.89□□□□□ -0.19
EFCAB11-201ENST00000316738 LGR6Q9HBX8 967 aa13.89□□□□□ -0.19
EFCAB11-201ENST00000316738 FOXD4L1Q9NU39 408 aa13.89□□□□□ -0.19
EFCAB11-201ENST00000316738 ABCA3Q99758 1704 aa13.88□□□□□ -0.19
EFCAB11-201ENST00000316738 LMOD2Q6P5Q4 547 aa13.88□□□□□ -0.19
EFCAB11-201ENST00000316738 PKD1L3Q7Z443 1732 aa13.88□□□□□ -0.19
EFCAB11-201ENST00000316738 SCN11AQ9UI33 1791 aa13.88□□□□□ -0.19
EFCAB11-201ENST00000316738 G2E3Q7L622 706 aa13.87□□□□□ -0.19
EFCAB11-201ENST00000316738 GCC1Q96CN9 775 aa13.87□□□□□ -0.19
EFCAB11-201ENST00000316738 ANP32EQ9BTT0 268 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms