RNA–Protein interactions for RNA: ENST00000316509.10

VAMP2-201, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP2, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-201ENST00000316509 KDM4FA0A1W2PPD8 638 aa17.64■□□□□ 0.41
VAMP2-201ENST00000316509 C14orf37Q86TY3 774 aa17.64■□□□□ 0.41
VAMP2-201ENST00000316509 SMC5Q8IY18 1101 aa17.64■□□□□ 0.41
VAMP2-201ENST00000316509 ZBTB7BO15156 539 aaPredicted RBP17.63■□□□□ 0.41
VAMP2-201ENST00000316509 PROSER2Q86WR7 435 aaPredicted RBP17.63■□□□□ 0.41
VAMP2-201ENST00000316509 C19orf44Q9H6X5 657 aa17.63■□□□□ 0.41
VAMP2-201ENST00000316509 MCM10Q7L590 875 aa17.62■□□□□ 0.41
VAMP2-201ENST00000316509 PTPRCP08575 1304 aa17.62■□□□□ 0.41
VAMP2-201ENST00000316509 PHRF1Q9P1Y6 1649 aaKnown RBP17.61■□□□□ 0.41
VAMP2-201ENST00000316509 GNAT3A8MTJ3 354 aa17.61■□□□□ 0.41
VAMP2-201ENST00000316509 NFAT5O94916 1531 aa17.61■□□□□ 0.41
VAMP2-201ENST00000316509 MST1RQ04912 1400 aa17.61■□□□□ 0.41
VAMP2-201ENST00000316509 ELL2O00472 640 aaPredicted RBP17.6■□□□□ 0.41
VAMP2-201ENST00000316509 NUTM2GQ5VZR2 741 aa17.6■□□□□ 0.41
VAMP2-201ENST00000316509 NPM2Q86SE8 214 aaKnown RBP17.6■□□□□ 0.41
VAMP2-201ENST00000316509 GCC1Q96CN9 775 aa17.59■□□□□ 0.41
VAMP2-201ENST00000316509 KIF1AQ12756 1690 aa17.59■□□□□ 0.41
VAMP2-201ENST00000316509 INTS3Q68E01 1043 aaKnown RBP17.59■□□□□ 0.41
VAMP2-201ENST00000316509 TSPYL4Q9UJ04 414 aa17.58■□□□□ 0.4
VAMP2-201ENST00000316509 DCCP43146 1447 aa17.58■□□□□ 0.4
VAMP2-201ENST00000316509 SLIT3O75094 1523 aa17.58■□□□□ 0.4
VAMP2-201ENST00000316509 CHMP4AQ9BY43 222 aa17.57■□□□□ 0.4
VAMP2-201ENST00000316509 MAP3K5Q99683 1374 aa17.57■□□□□ 0.4
VAMP2-201ENST00000316509 C1orf167Q5SNV9 1468 aa17.56■□□□□ 0.4
VAMP2-201ENST00000316509 FOXO3O43524 673 aa17.56■□□□□ 0.4
VAMP2-201ENST00000316509 RBM33Q96EV2 1170 aaKnown RBP17.56■□□□□ 0.4
VAMP2-201ENST00000316509 USP19O94966 1318 aa17.55■□□□□ 0.4
VAMP2-201ENST00000316509 KRT28Q7Z3Y7 464 aa17.55■□□□□ 0.4
VAMP2-201ENST00000316509 ARHGEF25Q86VW2 580 aa17.55■□□□□ 0.4
VAMP2-201ENST00000316509 ORAI2Q96SN7 254 aa17.55■□□□□ 0.4
VAMP2-201ENST00000316509 LRRC37A3O60309 1634 aa17.55■□□□□ 0.4
VAMP2-201ENST00000316509 GCP02774 474 aa17.55■□□□□ 0.4
VAMP2-201ENST00000316509 NUCB1Q02818 461 aa17.55■□□□□ 0.4
VAMP2-201ENST00000316509 TAF7Q15545 349 aaPredicted RBP17.55■□□□□ 0.4
VAMP2-201ENST00000316509 LTN1O94822 1766 aa17.54■□□□□ 0.4
VAMP2-201ENST00000316509 VIRMAQ69YN4 1812 aaKnown RBP17.53■□□□□ 0.4
VAMP2-201ENST00000316509 ATF3P18847 181 aa17.53■□□□□ 0.4
VAMP2-201ENST00000316509 AMOTQ4VCS5 1084 aa17.53■□□□□ 0.4
VAMP2-201ENST00000316509 LTV1Q96GA3 475 aaPredicted RBP17.52■□□□□ 0.4
VAMP2-201ENST00000316509 UPF2Q9HAU5 1272 aaKnown RBP17.52■□□□□ 0.4
VAMP2-201ENST00000316509 NCAPD2Q15021 1401 aa17.52■□□□□ 0.39
VAMP2-201ENST00000316509 MSH6P52701 1360 aa17.51■□□□□ 0.39
VAMP2-201ENST00000316509 PLEKHO1Q53GL0 409 aaPredicted RBP17.51■□□□□ 0.39
VAMP2-201ENST00000316509 CCDC30Q5VVM6 783 aa17.51■□□□□ 0.39
VAMP2-201ENST00000316509 RPAP2Q8IXW5 612 aaPredicted RBP17.51■□□□□ 0.39
VAMP2-201ENST00000316509 IL17REQ8NFR9 667 aa17.51■□□□□ 0.39
VAMP2-201ENST00000316509 TRPM3Q9HCF6 1732 aaPredicted RBP17.5■□□□□ 0.39
VAMP2-201ENST00000316509 SLC4A2P04920 1241 aa17.5■□□□□ 0.39
VAMP2-201ENST00000316509 NBPF6Q5VWK0 638 aa17.5■□□□□ 0.39
VAMP2-201ENST00000316509 CHD1LQ86WJ1 897 aa17.5■□□□□ 0.39
VAMP2-201ENST00000316509 NBPF4Q96M43 638 aa17.5■□□□□ 0.39
VAMP2-201ENST00000316509 STK31Q9BXU1 1019 aa17.5■□□□□ 0.39
VAMP2-201ENST00000316509 CEMIPQ8WUJ3 1361 aa17.5■□□□□ 0.39
VAMP2-201ENST00000316509 CCT4P50991 539 aaKnown RBP17.49■□□□□ 0.39
VAMP2-201ENST00000316509 CADPS2Q86UW7 1296 aa17.49■□□□□ 0.39
VAMP2-201ENST00000316509 DAXXQ9UER7 740 aaPredicted RBP17.49■□□□□ 0.39
VAMP2-201ENST00000316509 RGS12O14924 1447 aa17.49■□□□□ 0.39
VAMP2-201ENST00000316509 KRT24Q2M2I5 525 aa17.49■□□□□ 0.39
VAMP2-201ENST00000316509 AKAP4Q5JQC9 854 aa17.49■□□□□ 0.39
VAMP2-201ENST00000316509 HOXB7P09629 217 aa17.48■□□□□ 0.39
VAMP2-201ENST00000316509 TMEM94Q12767 1356 aa17.48■□□□□ 0.39
VAMP2-201ENST00000316509 MIS18AQ9NYP9 233 aa17.47■□□□□ 0.39
VAMP2-201ENST00000316509 OVOS2A0A0G2JMS6 1433 aa17.47■□□□□ 0.39
VAMP2-201ENST00000316509 EIF5BO60841 1220 aaKnown RBP17.47■□□□□ 0.39
VAMP2-201ENST00000316509 LMTK3Q96Q04 1460 aa17.47■□□□□ 0.39
VAMP2-201ENST00000316509 PLEKHG2Q9H7P9 1386 aa17.47■□□□□ 0.39
VAMP2-201ENST00000316509 ANKRD44Q8N8A2 993 aa17.46■□□□□ 0.39
VAMP2-201ENST00000316509 DCTPP1Q9H773 170 aa17.46■□□□□ 0.39
VAMP2-201ENST00000316509 SIRT2Q8IXJ6 389 aa17.45■□□□□ 0.38
VAMP2-201ENST00000316509 ANKRD24Q8TF21 1146 aa17.45■□□□□ 0.38
VAMP2-201ENST00000316509 NPHP3Q7Z494 1330 aa17.44■□□□□ 0.38
VAMP2-201ENST00000316509 ANKRD45Q5TZF3 282 aa17.44■□□□□ 0.38
VAMP2-201ENST00000316509 MED1Q15648 1581 aaPredicted RBP17.43■□□□□ 0.38
VAMP2-201ENST00000316509 USHBP1Q8N6Y0 703 aa17.43■□□□□ 0.38
VAMP2-201ENST00000316509 ALS2Q96Q42 1657 aa17.43■□□□□ 0.38
VAMP2-201ENST00000316509 CAMTA1Q9Y6Y1 1673 aa17.43■□□□□ 0.38
VAMP2-201ENST00000316509 BMP2KLQ5H9B9 411 aa17.43■□□□□ 0.38
VAMP2-201ENST00000316509 ABCC6O95255 1503 aa17.42■□□□□ 0.38
VAMP2-201ENST00000316509 LMOD2Q6P5Q4 547 aa17.42■□□□□ 0.38
VAMP2-201ENST00000316509 HMMRO75330 724 aa17.42■□□□□ 0.38
VAMP2-201ENST00000316509 XPCQ01831 940 aaPredicted RBP17.42■□□□□ 0.38
VAMP2-201ENST00000316509 BECN1Q14457 450 aa17.42■□□□□ 0.38
VAMP2-201ENST00000316509 C1orf141Q5JVX7 400 aa17.42■□□□□ 0.38
VAMP2-201ENST00000316509 TBC1D32Q96NH3 1257 aa17.42■□□□□ 0.38
VAMP2-201ENST00000316509 LNPKQ9C0E8 428 aa17.42■□□□□ 0.38
VAMP2-201ENST00000316509 C1orf115Q9H7X2 142 aa17.42■□□□□ 0.38
VAMP2-201ENST00000316509 LMO7Q8WWI1 1683 aa17.42■□□□□ 0.38
VAMP2-201ENST00000316509 CACNA1FO60840 1977 aa17.42■□□□□ 0.38
VAMP2-201ENST00000316509 ZNF530Q6P9A1 599 aaPredicted RBP17.41■□□□□ 0.38
VAMP2-201ENST00000316509 ZBTB7CA1YPR0 619 aa17.4■□□□□ 0.38
VAMP2-201ENST00000316509 SEC24BO95487 1268 aa17.4■□□□□ 0.38
VAMP2-201ENST00000316509 HSPA2P54652 639 aa17.4■□□□□ 0.38
VAMP2-201ENST00000316509 FLIIQ13045 1269 aa17.4■□□□□ 0.38
VAMP2-201ENST00000316509 PXDNLA1KZ92 1463 aa17.4■□□□□ 0.38
VAMP2-201ENST00000316509 GNAI3P08754 354 aa17.4■□□□□ 0.38
VAMP2-201ENST00000316509 TEFQ10587 303 aa17.4■□□□□ 0.38
VAMP2-201ENST00000316509 CEP85Q6P2H3 762 aa17.4■□□□□ 0.38
VAMP2-201ENST00000316509 EIF4A1P60842 406 aaKnown RBP17.39■□□□□ 0.37
VAMP2-201ENST00000316509 G2E3Q7L622 706 aa17.39■□□□□ 0.37
VAMP2-201ENST00000316509 LRRC59Q96AG4 307 aaKnown RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms