RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 ZC3H6P61129 1189 aaKnown RBP16.32■□□□□ 0.2
PCDHB9-201ENST00000316105 BMP2KLQ5H9B9 411 aa16.32■□□□□ 0.2
PCDHB9-201ENST00000316105 POLR1AO95602 1720 aaPredicted RBP16.32■□□□□ 0.2
PCDHB9-201ENST00000316105 KCNH5Q8NCM2 988 aa16.32■□□□□ 0.2
PCDHB9-201ENST00000316105 PTPRCP08575 1304 aa16.32■□□□□ 0.2
PCDHB9-201ENST00000316105 SRGAP3O43295 1099 aa16.31■□□□□ 0.2
PCDHB9-201ENST00000316105 IL13P35225 146 aa16.31■□□□□ 0.2
PCDHB9-201ENST00000316105 RNF17Q9BXT8 1623 aaKnown RBP16.31■□□□□ 0.2
PCDHB9-201ENST00000316105 EDC4Q6P2E9 1401 aaKnown RBP16.31■□□□□ 0.2
PCDHB9-201ENST00000316105 TTC21AQ8NDW8 1320 aa16.31■□□□□ 0.2
PCDHB9-201ENST00000316105 NPHP1O15259 732 aa16.31■□□□□ 0.2
PCDHB9-201ENST00000316105 MCM4P33991 863 aa16.31■□□□□ 0.2
PCDHB9-201ENST00000316105 CNTROBQ8N137 903 aa16.31■□□□□ 0.2
PCDHB9-201ENST00000316105 FLIIQ13045 1269 aa16.3■□□□□ 0.2
PCDHB9-201ENST00000316105 TATP17735 454 aaPredicted RBP16.29■□□□□ 0.2
PCDHB9-201ENST00000316105 TBC1D9Q6ZT07 1266 aa16.29■□□□□ 0.2
PCDHB9-201ENST00000316105 IL27Q8NEV9 243 aa16.29■□□□□ 0.2
PCDHB9-201ENST00000316105 ABCA9Q8IUA7 1624 aa16.29■□□□□ 0.2
PCDHB9-201ENST00000316105 MAP4K4O95819 1239 aaPredicted RBP16.29■□□□□ 0.2
PCDHB9-201ENST00000316105 SMC5Q8IY18 1101 aa16.29■□□□□ 0.2
PCDHB9-201ENST00000316105 MEIS3Q99687 375 aa16.29■□□□□ 0.2
PCDHB9-201ENST00000316105 MTHFSDQ2M296 383 aaKnown RBP16.27■□□□□ 0.2
PCDHB9-201ENST00000316105 MPRIPQ6WCQ1 1025 aa16.27■□□□□ 0.2
PCDHB9-201ENST00000316105 CSPP1Q1MSJ5 1256 aa16.27■□□□□ 0.19
PCDHB9-201ENST00000316105 NCBP3Q53F19 620 aaKnown RBP16.27■□□□□ 0.19
PCDHB9-201ENST00000316105 MAP3K19Q56UN5 1328 aa16.26■□□□□ 0.19
PCDHB9-201ENST00000316105 ATP6V1DQ9Y5K8 247 aa16.26■□□□□ 0.19
PCDHB9-201ENST00000316105 LRRFIP2Q9Y608 721 aaKnown RBP16.26■□□□□ 0.19
PCDHB9-201ENST00000316105 MYL6BP14649 208 aa16.26■□□□□ 0.19
PCDHB9-201ENST00000316105 PHF14O94880 888 aa16.25■□□□□ 0.19
PCDHB9-201ENST00000316105 MX1P20591 662 aa16.25■□□□□ 0.19
PCDHB9-201ENST00000316105 NUTM1Q86Y26 1132 aa16.25■□□□□ 0.19
PCDHB9-201ENST00000316105 ABCA6Q8N139 1617 aa16.25■□□□□ 0.19
PCDHB9-201ENST00000316105 SMC3Q9UQE7 1217 aa16.25■□□□□ 0.19
PCDHB9-201ENST00000316105 LAMC1P11047 1609 aa16.25■□□□□ 0.19
PCDHB9-201ENST00000316105 FLT4P35916 1363 aa16.25■□□□□ 0.19
PCDHB9-201ENST00000316105 PLEKHF1Q96S99 279 aa16.25■□□□□ 0.19
PCDHB9-201ENST00000316105 CIZ1Q9ULV3 898 aaPredicted RBP16.25■□□□□ 0.19
PCDHB9-201ENST00000316105 SIL1Q9H173 461 aa16.25■□□□□ 0.19
PCDHB9-201ENST00000316105 MRE11P49959 708 aa16.24■□□□□ 0.19
PCDHB9-201ENST00000316105 RNF20Q5VTR2 975 aa16.24■□□□□ 0.19
PCDHB9-201ENST00000316105 FSD1Q9BTV5 496 aa16.24■□□□□ 0.19
PCDHB9-201ENST00000316105 HTATSF1O43719 755 aaKnown RBP16.24■□□□□ 0.19
PCDHB9-201ENST00000316105 KCNA6P17658 529 aa16.24■□□□□ 0.19
PCDHB9-201ENST00000316105 EYA1Q99502 592 aa16.24■□□□□ 0.19
PCDHB9-201ENST00000316105 MCM2P49736 904 aa16.24■□□□□ 0.19
PCDHB9-201ENST00000316105 ZBTB7BO15156 539 aaPredicted RBP16.23■□□□□ 0.19
PCDHB9-201ENST00000316105 NEUROD6Q96NK8 337 aa16.23■□□□□ 0.19
PCDHB9-201ENST00000316105 ANKRD44Q8N8A2 993 aa16.23■□□□□ 0.19
PCDHB9-201ENST00000316105 CEP152O94986 1710 aa16.23■□□□□ 0.19
PCDHB9-201ENST00000316105 VPS37CA5D8V6 355 aaPredicted RBP16.23■□□□□ 0.19
PCDHB9-201ENST00000316105 ERC1Q8IUD2 1116 aa16.23■□□□□ 0.19
PCDHB9-201ENST00000316105 DRC7Q8IY82 874 aa16.23■□□□□ 0.19
PCDHB9-201ENST00000316105 METP08581 1390 aa16.23■□□□□ 0.19
PCDHB9-201ENST00000316105 TBX22Q9Y458 520 aa16.22■□□□□ 0.19
PCDHB9-201ENST00000316105 TMEM2Q9UHN6 1383 aa16.22■□□□□ 0.19
PCDHB9-201ENST00000316105 SYTL4Q96C24 671 aaPredicted RBP16.22■□□□□ 0.19
PCDHB9-201ENST00000316105 SPG7Q9UQ90 795 aa16.22■□□□□ 0.19
PCDHB9-201ENST00000316105 GNL2Q13823 731 aaKnown RBP16.22■□□□□ 0.19
PCDHB9-201ENST00000316105 TTC22Q5TAA0 569 aa16.22■□□□□ 0.19
PCDHB9-201ENST00000316105 CAVIN1Q6NZI2 390 aaKnown RBP16.22■□□□□ 0.19
PCDHB9-201ENST00000316105 PKNOX2Q96KN3 472 aa16.22■□□□□ 0.19
PCDHB9-201ENST00000316105 TSHZ3Q63HK5 1081 aa16.22■□□□□ 0.19
PCDHB9-201ENST00000316105 TSPOAP1O95153 1857 aa16.21■□□□□ 0.19
PCDHB9-201ENST00000316105 HSP90AA2PQ14568 343 aaPredicted RBP16.21■□□□□ 0.19
PCDHB9-201ENST00000316105 AMOTQ4VCS5 1084 aa16.21■□□□□ 0.19
PCDHB9-201ENST00000316105 INO80Q9ULG1 1556 aaPredicted RBP16.21■□□□□ 0.19
PCDHB9-201ENST00000316105 PRPF40AO75400 957 aaKnown RBP16.21■□□□□ 0.19
PCDHB9-201ENST00000316105 LTKP29376 864 aa16.21■□□□□ 0.19
PCDHB9-201ENST00000316105 C16orf71Q8IYS4 520 aaPredicted RBP16.21■□□□□ 0.19
PCDHB9-201ENST00000316105 DNAAF4Q8WXU2 420 aa16.21■□□□□ 0.19
PCDHB9-201ENST00000316105 ADGRB3O60242 1522 aa16.21■□□□□ 0.18
PCDHB9-201ENST00000316105 H3BQV1 296 aa16.2■□□□□ 0.18
PCDHB9-201ENST00000316105 ANXA1P04083 346 aa16.2■□□□□ 0.18
PCDHB9-201ENST00000316105 IFFO2Q5TF58 517 aa16.2■□□□□ 0.18
PCDHB9-201ENST00000316105 FAM184AQ8NB25 1140 aa16.2■□□□□ 0.18
PCDHB9-201ENST00000316105 ARHGAP31Q2M1Z3 1444 aa16.2■□□□□ 0.18
PCDHB9-201ENST00000316105 CABP4P57796 275 aa16.2■□□□□ 0.18
PCDHB9-201ENST00000316105 CWC22Q9HCG8 908 aaKnown RBP16.2■□□□□ 0.18
PCDHB9-201ENST00000316105 KIF1BPQ96EK5 621 aa16.2■□□□□ 0.18
PCDHB9-201ENST00000316105 AACSQ86V21 672 aa16.2■□□□□ 0.18
PCDHB9-201ENST00000316105 KIAA2012Q0VF49 1180 aa16.19■□□□□ 0.18
PCDHB9-201ENST00000316105 STRN4Q9NRL3 753 aa16.19■□□□□ 0.18
PCDHB9-201ENST00000316105 PPRC1Q5VV67 1664 aaKnown RBP16.19■□□□□ 0.18
PCDHB9-201ENST00000316105 CWC27Q6UX04 472 aaKnown RBP16.19■□□□□ 0.18
PCDHB9-201ENST00000316105 TOM1L2Q6ZVM7 507 aa16.19■□□□□ 0.18
PCDHB9-201ENST00000316105 KIF3AQ9Y496 699 aa16.18■□□□□ 0.18
PCDHB9-201ENST00000316105 PRDM11Q9NQV5 511 aa16.18■□□□□ 0.18
PCDHB9-201ENST00000316105 GLI2P10070 1586 aa16.18■□□□□ 0.18
PCDHB9-201ENST00000316105 UPF3BQ9BZI7 483 aaKnown RBP16.18■□□□□ 0.18
PCDHB9-201ENST00000316105 DCTPP1Q9H773 170 aa16.18■□□□□ 0.18
PCDHB9-201ENST00000316105 PI4KAP2A4QPH2 592 aa16.18■□□□□ 0.18
PCDHB9-201ENST00000316105 SDSP20132 328 aa16.18■□□□□ 0.18
PCDHB9-201ENST00000316105 PI4KAP1Q8N8J0 262 aa16.18■□□□□ 0.18
PCDHB9-201ENST00000316105 UBE2Q2Q8WVN8 375 aa16.18■□□□□ 0.18
PCDHB9-201ENST00000316105 DNAJC2Q99543 621 aaKnown RBP16.18■□□□□ 0.18
PCDHB9-201ENST00000316105 DBF4Q9UBU7 674 aaPredicted RBP16.18■□□□□ 0.18
PCDHB9-201ENST00000316105 PIK3R4Q99570 1358 aa16.18■□□□□ 0.18
PCDHB9-201ENST00000316105 CEP85Q6P2H3 762 aa16.17■□□□□ 0.18
PCDHB9-201ENST00000316105 KRT28Q7Z3Y7 464 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms