RNA–Protein interactions for RNA: ENST00000314992.9

EXD1-201, Transcript of exonuclease 3'-5' domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EXD1, Length 2,942 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD1-201ENST00000314992 POLD1P28340 1107 aa8.03□□□□□ -1.12
EXD1-201ENST00000314992 RPGRIP1LQ68CZ1 1315 aa8.03□□□□□ -1.12
EXD1-201ENST00000314992 ZNF521Q96K83 1311 aa8.03□□□□□ -1.12
EXD1-201ENST00000314992 COL18A1P39060 1754 aa8.03□□□□□ -1.12
EXD1-201ENST00000314992 USP54Q70EL1 1684 aa8.03□□□□□ -1.12
EXD1-201ENST00000314992 PDE4AP27815 886 aa8.03□□□□□ -1.12
EXD1-201ENST00000314992 TMF1P82094 1093 aa8.03□□□□□ -1.12
EXD1-201ENST00000314992 ZNF326Q5BKZ1 582 aaKnown RBP8.03□□□□□ -1.12
EXD1-201ENST00000314992 EXOC6Q8TAG9 804 aa8.03□□□□□ -1.12
EXD1-201ENST00000314992 CABLES1Q8TDN4 633 aa8.03□□□□□ -1.12
EXD1-201ENST00000314992 PLEKHG2Q9H7P9 1386 aa8.03□□□□□ -1.12
EXD1-201ENST00000314992 XPCQ01831 940 aaPredicted RBP8.02□□□□□ -1.12
EXD1-201ENST00000314992 ABHD8Q96I13 439 aa8.02□□□□□ -1.13
EXD1-201ENST00000314992 PHF8Q9UPP1 1060 aa8.02□□□□□ -1.13
EXD1-201ENST00000314992 LY75O60449 1722 aa8.02□□□□□ -1.13
EXD1-201ENST00000314992 ABCC6O95255 1503 aa8.02□□□□□ -1.13
EXD1-201ENST00000314992 CDCA8Q53HL2 280 aa8.02□□□□□ -1.13
EXD1-201ENST00000314992 TRMT2AQ8IZ69 625 aaKnown RBP8.02□□□□□ -1.13
EXD1-201ENST00000314992 KDM2BQ8NHM5 1336 aa8.02□□□□□ -1.13
EXD1-201ENST00000314992 EIF3AQ14152 1382 aaKnown RBP8.02□□□□□ -1.13
EXD1-201ENST00000314992 PPM1GO15355 546 aaPredicted RBP8.01□□□□□ -1.13
EXD1-201ENST00000314992 DDRGK1Q96HY6 314 aa8.01□□□□□ -1.13
EXD1-201ENST00000314992 ADAMTS7Q9UKP4 1686 aa8.01□□□□□ -1.13
EXD1-201ENST00000314992 NBPF1Q3BBV0 1214 aa8□□□□□ -1.13
EXD1-201ENST00000314992 KDM2AQ9Y2K7 1162 aa8□□□□□ -1.13
EXD1-201ENST00000314992 COL5A2P05997 1499 aaPredicted RBP8□□□□□ -1.13
EXD1-201ENST00000314992 HAP1P54257 671 aaPredicted RBP8□□□□□ -1.13
EXD1-201ENST00000314992 CRB1P82279 1406 aa8□□□□□ -1.13
EXD1-201ENST00000314992 CDCA7Q9BWT1 371 aaPredicted RBP7.99□□□□□ -1.13
EXD1-201ENST00000314992 PANK3Q9H999 370 aa7.99□□□□□ -1.13
EXD1-201ENST00000314992 BTAF1O14981 1849 aa7.99□□□□□ -1.13
EXD1-201ENST00000314992 NCBP3Q53F19 620 aaKnown RBP7.99□□□□□ -1.13
EXD1-201ENST00000314992 CTCFP49711 727 aaPredicted RBP7.99□□□□□ -1.13
EXD1-201ENST00000314992 AMER1Q5JTC6 1135 aaPredicted RBP7.99□□□□□ -1.13
EXD1-201ENST00000314992 CENPQQ7L2Z9 268 aaPredicted RBP7.99□□□□□ -1.13
EXD1-201ENST00000314992 POLR3GLQ9BT43 218 aa7.99□□□□□ -1.13
EXD1-201ENST00000314992 PNPLA7Q6ZV29 1317 aa7.98□□□□□ -1.13
EXD1-201ENST00000314992 SBNO2Q9Y2G9 1366 aa7.98□□□□□ -1.13
EXD1-201ENST00000314992 RTL5Q5HYW3 569 aaPredicted RBP7.98□□□□□ -1.13
EXD1-201ENST00000314992 ARFGEF1Q9Y6D6 1849 aa7.97□□□□□ -1.13
EXD1-201ENST00000314992 ZNF827Q17R98 1081 aa7.97□□□□□ -1.13
EXD1-201ENST00000314992 DUSP27Q5VZP5 1158 aa7.97□□□□□ -1.13
EXD1-201ENST00000314992 SMC1BQ8NDV3 1235 aa7.97□□□□□ -1.13
EXD1-201ENST00000314992 ITSN1Q15811 1721 aa7.97□□□□□ -1.13
EXD1-201ENST00000314992 PITPNM2Q9BZ72 1349 aa7.97□□□□□ -1.13
EXD1-201ENST00000314992 BRCA1P38398 1863 aaKnown RBP7.96□□□□□ -1.13
EXD1-201ENST00000314992 VGFO15240 615 aaPredicted RBP7.96□□□□□ -1.13
EXD1-201ENST00000314992 PPP2R1AP30153 589 aa7.96□□□□□ -1.13
EXD1-201ENST00000314992 AAMPQ13685 434 aa7.96□□□□□ -1.13
EXD1-201ENST00000314992 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.96□□□□□ -1.13
EXD1-201ENST00000314992 CDCA7LQ96GN5 454 aa7.96□□□□□ -1.13
EXD1-201ENST00000314992 SLC27A3Q5K4L6 730 aa7.96□□□□□ -1.14
EXD1-201ENST00000314992 PRPF38BQ5VTL8 546 aaKnown RBP7.96□□□□□ -1.14
EXD1-201ENST00000314992 SLFN5Q08AF3 891 aa7.96□□□□□ -1.14
EXD1-201ENST00000314992 CRBNQ96SW2 442 aa7.96□□□□□ -1.14
EXD1-201ENST00000314992 FOXN1O15353 648 aa7.95□□□□□ -1.14
EXD1-201ENST00000314992 PLEKHH1Q9ULM0 1364 aa7.95□□□□□ -1.14
EXD1-201ENST00000314992 ADAMTS8Q9UP79 889 aa7.95□□□□□ -1.14
EXD1-201ENST00000314992 ZC3H4Q9UPT8 1303 aaKnown RBP7.94□□□□□ -1.14
EXD1-201ENST00000314992 GOLGA2Q08379 1002 aa7.94□□□□□ -1.14
EXD1-201ENST00000314992 PTF1AQ7RTS3 328 aa7.94□□□□□ -1.14
EXD1-201ENST00000314992 KNSTRNQ9Y448 316 aa7.94□□□□□ -1.14
EXD1-201ENST00000314992 PRDM11Q9NQV5 511 aa7.94□□□□□ -1.14
EXD1-201ENST00000314992 SLIT3O75094 1523 aa7.94□□□□□ -1.14
EXD1-201ENST00000314992 MARCH10Q8NA82 808 aaPredicted RBP7.93□□□□□ -1.14
EXD1-201ENST00000314992 POLR3AO14802 1390 aaPredicted RBP7.93□□□□□ -1.14
EXD1-201ENST00000314992 HTRA3P83110 453 aa7.92□□□□□ -1.14
EXD1-201ENST00000314992 PMFBP1Q8TBY8 1022 aa7.92□□□□□ -1.14
EXD1-201ENST00000314992 PUS7Q96PZ0 661 aaKnown RBP7.92□□□□□ -1.14
EXD1-201ENST00000314992 KDM6AO15550 1401 aaPredicted RBP7.92□□□□□ -1.14
EXD1-201ENST00000314992 PDE3AQ14432 1141 aa7.92□□□□□ -1.14
EXD1-201ENST00000314992 CC2D1BQ5T0F9 858 aaKnown RBP7.92□□□□□ -1.14
EXD1-201ENST00000314992 CNTNAP1P78357 1384 aa7.92□□□□□ -1.14
EXD1-201ENST00000314992 EIF5BO60841 1220 aaKnown RBP7.92□□□□□ -1.14
EXD1-201ENST00000314992 WDR43Q15061 677 aaKnown RBP eCLIP7.92□□□□□ -1.14
EXD1-201ENST00000314992 RGL3Q3MIN7 710 aa7.92□□□□□ -1.14
EXD1-201ENST00000314992 LARP1Q6PKG0 1096 aaKnown RBP7.92□□□□□ -1.14
EXD1-201ENST00000314992 GCC1Q96CN9 775 aa7.92□□□□□ -1.14
EXD1-201ENST00000314992 E9PSI1 815 aa7.91□□□□□ -1.14
EXD1-201ENST00000314992 NMRK2Q9NPI5 230 aa7.91□□□□□ -1.14
EXD1-201ENST00000314992 WBP1LQ9NX94 342 aa7.91□□□□□ -1.14
EXD1-201ENST00000314992 HSPA8P11142 646 aaKnown RBP7.91□□□□□ -1.14
EXD1-201ENST00000314992 ZNF526Q8TF50 670 aaPredicted RBP7.91□□□□□ -1.14
EXD1-201ENST00000314992 CREBZFQ9NS37 354 aa7.91□□□□□ -1.14
EXD1-201ENST00000314992 C8orf34Q49A92 452 aa7.9□□□□□ -1.14
EXD1-201ENST00000314992 YTHDC2Q9H6S0 1430 aaKnown RBP7.9□□□□□ -1.14
EXD1-201ENST00000314992 HMGB2P26583 209 aaKnown RBP7.9□□□□□ -1.15
EXD1-201ENST00000314992 DDB1Q16531 1140 aa7.89□□□□□ -1.15
EXD1-201ENST00000314992 PKNOX2Q96KN3 472 aa7.89□□□□□ -1.15
EXD1-201ENST00000314992 CGNL1Q0VF96 1302 aa7.89□□□□□ -1.15
EXD1-201ENST00000314992 PLEKHG5O94827 1062 aa7.89□□□□□ -1.15
EXD1-201ENST00000314992 LRRC4BQ9NT99 713 aa7.89□□□□□ -1.15
EXD1-201ENST00000314992 PLIN1O60240 522 aa7.89□□□□□ -1.15
EXD1-201ENST00000314992 NEFMP07197 916 aa7.89□□□□□ -1.15
EXD1-201ENST00000314992 UTRNP46939 3433 aa7.88□□□□□ -1.15
EXD1-201ENST00000314992 C20orf194Q5TEA3 1177 aa7.88□□□□□ -1.15
EXD1-201ENST00000314992 C16orf71Q8IYS4 520 aaPredicted RBP7.88□□□□□ -1.15
EXD1-201ENST00000314992 TOGARAM1Q9Y4F4 1720 aa7.88□□□□□ -1.15
EXD1-201ENST00000314992 CCDC27Q2M243 656 aa7.88□□□□□ -1.15
EXD1-201ENST00000314992 SBF1O95248 1867 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms