RNA–Protein interactions for RNA: ENST00000314797.10

COPG1-201, Transcript of coatomer protein complex subunit gamma 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPG1, Length 3,078 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPG1-201ENST00000314797 ABCA3Q99758 1704 aa10.84□□□□□ -0.67
COPG1-201ENST00000314797 MVPQ14764 893 aaKnown RBP10.84□□□□□ -0.67
COPG1-201ENST00000314797 ATF7IPQ6VMQ6 1270 aa10.84□□□□□ -0.67
COPG1-201ENST00000314797 CLUAP1Q96AJ1 413 aa10.84□□□□□ -0.67
COPG1-201ENST00000314797 KDM3BQ7LBC6 1761 aa10.84□□□□□ -0.67
COPG1-201ENST00000314797 CPDO75976 1380 aa10.83□□□□□ -0.67
COPG1-201ENST00000314797 CEMIPQ8WUJ3 1361 aa10.83□□□□□ -0.67
COPG1-201ENST00000314797 PANK1Q8TE04 598 aa10.83□□□□□ -0.68
COPG1-201ENST00000314797 VIRMAQ69YN4 1812 aaKnown RBP10.83□□□□□ -0.68
COPG1-201ENST00000314797 SIPA1L3O60292 1781 aaPredicted RBP10.83□□□□□ -0.68
COPG1-201ENST00000314797 TCERG1O14776 1098 aaKnown RBP10.83□□□□□ -0.68
COPG1-201ENST00000314797 SOX12O15370 315 aa10.83□□□□□ -0.68
COPG1-201ENST00000314797 TRIM27P14373 513 aa10.83□□□□□ -0.68
COPG1-201ENST00000314797 MRPL50Q8N5N7 158 aaKnown RBP10.83□□□□□ -0.68
COPG1-201ENST00000314797 SMC4Q9NTJ3 1288 aa10.83□□□□□ -0.68
COPG1-201ENST00000314797 SOS1Q07889 1333 aaPredicted RBP10.83□□□□□ -0.68
COPG1-201ENST00000314797 RBM19Q9Y4C8 960 aaKnown RBP10.83□□□□□ -0.68
COPG1-201ENST00000314797 MAP3K5Q99683 1374 aa10.82□□□□□ -0.68
COPG1-201ENST00000314797 IPO8O15397 1037 aaKnown RBP10.82□□□□□ -0.68
COPG1-201ENST00000314797 DZIP1LQ8IYY4 767 aaKnown RBP10.82□□□□□ -0.68
COPG1-201ENST00000314797 SPATA31A3Q5VYP0 1347 aa10.82□□□□□ -0.68
COPG1-201ENST00000314797 N4BP2Q86UW6 1770 aaPredicted RBP10.82□□□□□ -0.68
COPG1-201ENST00000314797 HAP1P54257 671 aaPredicted RBP10.82□□□□□ -0.68
COPG1-201ENST00000314797 CANXP27824 592 aaKnown RBP10.81□□□□□ -0.68
COPG1-201ENST00000314797 NBPF6Q5VWK0 638 aa10.81□□□□□ -0.68
COPG1-201ENST00000314797 TSPYL6Q8N831 410 aa10.81□□□□□ -0.68
COPG1-201ENST00000314797 FRAT1Q92837 279 aaPredicted RBP10.81□□□□□ -0.68
COPG1-201ENST00000314797 NBPF4Q96M43 638 aa10.81□□□□□ -0.68
COPG1-201ENST00000314797 NOB1Q9ULX3 412 aaKnown RBP10.81□□□□□ -0.68
COPG1-201ENST00000314797 COG6Q9Y2V7 657 aa10.81□□□□□ -0.68
COPG1-201ENST00000314797 DCTN1Q14203 1278 aa10.81□□□□□ -0.68
COPG1-201ENST00000314797 TWISTNBQ3B726 338 aaPredicted RBP10.81□□□□□ -0.68
COPG1-201ENST00000314797 C8orf58Q8NAV2 365 aa10.81□□□□□ -0.68
COPG1-201ENST00000314797 GNAT3A8MTJ3 354 aa10.81□□□□□ -0.68
COPG1-201ENST00000314797 MCM10Q7L590 875 aa10.81□□□□□ -0.68
COPG1-201ENST00000314797 BCL2L13Q9BXK5 485 aa10.81□□□□□ -0.68
COPG1-201ENST00000314797 SOS2Q07890 1332 aaPredicted RBP10.8□□□□□ -0.68
COPG1-201ENST00000314797 CACNA1FO60840 1977 aa10.8□□□□□ -0.68
COPG1-201ENST00000314797 PKD1L3Q7Z443 1732 aa10.8□□□□□ -0.68
COPG1-201ENST00000314797 BRINP3Q76B58 766 aa10.8□□□□□ -0.68
COPG1-201ENST00000314797 TNNQ9UQP3 1299 aa10.8□□□□□ -0.68
COPG1-201ENST00000314797 ABCC4O15439 1325 aa10.8□□□□□ -0.68
COPG1-201ENST00000314797 RGS12O14924 1447 aa10.79□□□□□ -0.68
COPG1-201ENST00000314797 XPCQ01831 940 aaPredicted RBP10.79□□□□□ -0.68
COPG1-201ENST00000314797 DDX19BQ9UMR2 479 aa10.79□□□□□ -0.68
COPG1-201ENST00000314797 ZNF335Q9H4Z2 1342 aaPredicted RBP10.79□□□□□ -0.68
COPG1-201ENST00000314797 IGHDP01880 384 aa10.78□□□□□ -0.68
COPG1-201ENST00000314797 ERBB3P21860 1342 aa10.78□□□□□ -0.68
COPG1-201ENST00000314797 RTF1Q92541 710 aaKnown RBP10.78□□□□□ -0.68
COPG1-201ENST00000314797 AXIN2Q9Y2T1 843 aa10.78□□□□□ -0.68
COPG1-201ENST00000314797 AMOTQ4VCS5 1084 aa10.78□□□□□ -0.68
COPG1-201ENST00000314797 LAS1LQ9Y4W2 734 aaKnown RBP10.78□□□□□ -0.68
COPG1-201ENST00000314797 IL17REQ8NFR9 667 aa10.78□□□□□ -0.68
COPG1-201ENST00000314797 ZBTB40Q9NUA8 1239 aa10.78□□□□□ -0.68
COPG1-201ENST00000314797 PARP4Q9UKK3 1724 aaKnown RBP10.78□□□□□ -0.68
COPG1-201ENST00000314797 HDAC1Q13547 482 aaPredicted RBP10.77□□□□□ -0.68
COPG1-201ENST00000314797 FTSJ3Q8IY81 847 aaKnown RBP10.77□□□□□ -0.68
COPG1-201ENST00000314797 ANKRD24Q8TF21 1146 aa10.77□□□□□ -0.68
COPG1-201ENST00000314797 SLAIN2Q9P270 581 aa10.77□□□□□ -0.68
COPG1-201ENST00000314797 PCDHB15Q9Y5E8 787 aa10.77□□□□□ -0.68
COPG1-201ENST00000314797 SCN11AQ9UI33 1791 aa10.77□□□□□ -0.69
COPG1-201ENST00000314797 COL22A1Q8NFW1 1626 aaPredicted RBP10.76□□□□□ -0.69
COPG1-201ENST00000314797 PTPRCP08575 1304 aa10.76□□□□□ -0.69
COPG1-201ENST00000314797 AKAP4Q5JQC9 854 aa10.76□□□□□ -0.69
COPG1-201ENST00000314797 TMEM57Q8N5G2 664 aa10.76□□□□□ -0.69
COPG1-201ENST00000314797 LTBP4Q8N2S1 1624 aa10.76□□□□□ -0.69
COPG1-201ENST00000314797 AHDC1Q5TGY3 1603 aaPredicted RBP10.75□□□□□ -0.69
COPG1-201ENST00000314797 CHMP4BQ9H444 224 aaKnown RBP10.75□□□□□ -0.69
COPG1-201ENST00000314797 MRC1P22897 1456 aa10.75□□□□□ -0.69
COPG1-201ENST00000314797 ZBTB7BO15156 539 aaPredicted RBP10.75□□□□□ -0.69
COPG1-201ENST00000314797 TAF7Q15545 349 aaPredicted RBP10.75□□□□□ -0.69
COPG1-201ENST00000314797 API5Q9BZZ5 524 aaKnown RBP10.75□□□□□ -0.69
COPG1-201ENST00000314797 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.75□□□□□ -0.692e-7■■□□□ 13.3
COPG1-201ENST00000314797 PLEKHO1Q53GL0 409 aaPredicted RBP10.74□□□□□ -0.69
COPG1-201ENST00000314797 INTS3Q68E01 1043 aaKnown RBP10.74□□□□□ -0.69
COPG1-201ENST00000314797 LTV1Q96GA3 475 aaPredicted RBP10.74□□□□□ -0.69
COPG1-201ENST00000314797 EIF5BO60841 1220 aaKnown RBP10.74□□□□□ -0.69
COPG1-201ENST00000314797 USHBP1Q8N6Y0 703 aa10.74□□□□□ -0.69
COPG1-201ENST00000314797 DDX17Q92841 729 aaKnown RBP10.74□□□□□ -0.69
COPG1-201ENST00000314797 LRRC59Q96AG4 307 aaKnown RBP10.74□□□□□ -0.69
COPG1-201ENST00000314797 RWDD1Q9H446 243 aaPredicted RBP10.74□□□□□ -0.69
COPG1-201ENST00000314797 HEG1Q9ULI3 1381 aa10.74□□□□□ -0.69
COPG1-201ENST00000314797 HOXB7P09629 217 aa10.73□□□□□ -0.69
COPG1-201ENST00000314797 TSPYL4Q9UJ04 414 aa10.73□□□□□ -0.69
COPG1-201ENST00000314797 BACH2Q9BYV9 841 aa10.73□□□□□ -0.69
COPG1-201ENST00000314797 PXDNLA1KZ92 1463 aa10.73□□□□□ -0.69
COPG1-201ENST00000314797 KRT24Q2M2I5 525 aa10.72□□□□□ -0.69
COPG1-201ENST00000314797 ITPRIPQ8IWB1 547 aa10.72□□□□□ -0.69
COPG1-201ENST00000314797 MEGF6O75095 1541 aa10.71□□□□□ -0.69
COPG1-201ENST00000314797 SHANK3Q9BYB0 1731 aa10.71□□□□□ -0.69
COPG1-201ENST00000314797 ELL2O00472 640 aaPredicted RBP10.71□□□□□ -0.69
COPG1-201ENST00000314797 SMC5Q8IY18 1101 aa10.71□□□□□ -0.69
COPG1-201ENST00000314797 COL5A2P05997 1499 aaPredicted RBP10.71□□□□□ -0.7
COPG1-201ENST00000314797 ROBO1Q9Y6N7 1651 aa10.71□□□□□ -0.7
COPG1-201ENST00000314797 PDE4AP27815 886 aa10.71□□□□□ -0.7
COPG1-201ENST00000314797 LMOD2Q6P5Q4 547 aa10.71□□□□□ -0.7
COPG1-201ENST00000314797 ZC3H6P61129 1189 aaKnown RBP10.7□□□□□ -0.7
COPG1-201ENST00000314797 RNMTO43148 476 aaKnown RBP10.7□□□□□ -0.7
COPG1-201ENST00000314797 MIS18AQ9NYP9 233 aa10.7□□□□□ -0.7
COPG1-201ENST00000314797 CHMP4AQ9BY43 222 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms