RNA–Protein interactions for RNA: ENST00000314121.8

ZNF541-202, Transcript of zinc finger protein 541, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ZNF541, Length 4,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-202ENST00000314121 PDILTQ8N807 584 aa16.49■□□□□ 0.23
ZNF541-202ENST00000314121 MIS18AQ9NYP9 233 aa16.49■□□□□ 0.23
ZNF541-202ENST00000314121 POLR3AO14802 1390 aaPredicted RBP16.49■□□□□ 0.23
ZNF541-202ENST00000314121 NOS1P29475 1434 aa16.49■□□□□ 0.23
ZNF541-202ENST00000314121 NUTM1Q86Y26 1132 aa16.49■□□□□ 0.23
ZNF541-202ENST00000314121 TMX4Q9H1E5 349 aaPredicted RBP16.49■□□□□ 0.23
ZNF541-202ENST00000314121 NUP153P49790 1475 aaKnown RBP16.48■□□□□ 0.23
ZNF541-202ENST00000314121 CASTP20810 708 aaKnown RBP16.48■□□□□ 0.23
ZNF541-202ENST00000314121 NME9Q86XW9 330 aa16.48■□□□□ 0.23
ZNF541-202ENST00000314121 ACBD3Q9H3P7 528 aa16.48■□□□□ 0.23
ZNF541-202ENST00000314121 GNAT3A8MTJ3 354 aa16.48■□□□□ 0.23
ZNF541-202ENST00000314121 XRCC6P12956 609 aaKnown RBP eCLIP16.48■□□□□ 0.23
ZNF541-202ENST00000314121 MAP3K11Q16584 847 aa16.48■□□□□ 0.23
ZNF541-202ENST00000314121 HSP90B2PQ58FF3 399 aa16.48■□□□□ 0.23
ZNF541-202ENST00000314121 PTPRCP08575 1304 aa16.48■□□□□ 0.23
ZNF541-202ENST00000314121 XBP1P17861 261 aa16.48■□□□□ 0.23
ZNF541-202ENST00000314121 IDI1Q13907 227 aa16.48■□□□□ 0.23
ZNF541-202ENST00000314121 CCDC183Q5T5S1 534 aa16.47■□□□□ 0.23
ZNF541-202ENST00000314121 AMOTL1Q8IY63 956 aa16.47■□□□□ 0.23
ZNF541-202ENST00000314121 VPS37DQ86XT2 251 aa16.47■□□□□ 0.23
ZNF541-202ENST00000314121 SART3Q15020 963 aaKnown RBP16.47■□□□□ 0.23
ZNF541-202ENST00000314121 TBC1D2BQ9UPU7 963 aa16.47■□□□□ 0.23
ZNF541-202ENST00000314121 PIK3C2GO75747 1445 aa16.46■□□□□ 0.23
ZNF541-202ENST00000314121 ARHGEF12Q9NZN5 1544 aa16.46■□□□□ 0.23
ZNF541-202ENST00000314121 ANKRD36BQ8N2N9 1353 aa16.46■□□□□ 0.23
ZNF541-202ENST00000314121 CLCN1P35523 988 aa16.46■□□□□ 0.23
ZNF541-202ENST00000314121 SNX21Q969T3 373 aa16.46■□□□□ 0.23
ZNF541-202ENST00000314121 CCDC66A2RUB6 948 aa16.46■□□□□ 0.23
ZNF541-202ENST00000314121 ESCO1Q5FWF5 840 aa16.46■□□□□ 0.23
ZNF541-202ENST00000314121 F6X3S4 739 aa16.46■□□□□ 0.22
ZNF541-202ENST00000314121 CEP89Q96ST8 783 aa16.46■□□□□ 0.22
ZNF541-202ENST00000314121 TTC22Q5TAA0 569 aa16.45■□□□□ 0.22
ZNF541-202ENST00000314121 CEP57L1Q8IYX8 460 aa16.45■□□□□ 0.22
ZNF541-202ENST00000314121 SH2B1Q9NRF2 756 aaPredicted RBP16.45■□□□□ 0.22
ZNF541-202ENST00000314121 ADGRL1O94910 1474 aa16.45■□□□□ 0.22
ZNF541-202ENST00000314121 ZNF608Q9ULD9 1512 aaPredicted RBP16.45■□□□□ 0.22
ZNF541-202ENST00000314121 MCM5P33992 734 aa16.45■□□□□ 0.22
ZNF541-202ENST00000314121 SLC26A8Q96RN1 970 aa16.45■□□□□ 0.22
ZNF541-202ENST00000314121 CCDC83Q8IWF9 413 aa16.45■□□□□ 0.22
ZNF541-202ENST00000314121 FERMT3Q86UX7 667 aa16.44■□□□□ 0.22
ZNF541-202ENST00000314121 NOL10Q9BSC4 688 aaKnown RBP16.44■□□□□ 0.22
ZNF541-202ENST00000314121 SCAND2PQ9GZW5 306 aaPredicted RBP16.44■□□□□ 0.22
ZNF541-202ENST00000314121 BRMS1Q9HCU9 246 aa16.44■□□□□ 0.22
ZNF541-202ENST00000314121 MBIPQ9NS73 344 aa16.44■□□□□ 0.22
ZNF541-202ENST00000314121 XPCQ01831 940 aaPredicted RBP16.44■□□□□ 0.22
ZNF541-202ENST00000314121 CCDC158Q5M9N0 1113 aa16.44■□□□□ 0.22
ZNF541-202ENST00000314121 LIMCH1Q9UPQ0 1083 aa16.44■□□□□ 0.22
ZNF541-202ENST00000314121 RLBP1P12271 317 aa16.44■□□□□ 0.22
ZNF541-202ENST00000314121 THEMISQ8N1K5 641 aaPredicted RBP16.44■□□□□ 0.22
ZNF541-202ENST00000314121 UNC13AQ9UPW8 1703 aa16.44■□□□□ 0.22
ZNF541-202ENST00000314121 FILIP1Q7Z7B0 1213 aa16.43■□□□□ 0.22
ZNF541-202ENST00000314121 ATP10BO94823 1461 aa16.43■□□□□ 0.22
ZNF541-202ENST00000314121 TATP17735 454 aaPredicted RBP16.43■□□□□ 0.22
ZNF541-202ENST00000314121 ATP2B1P20020 1258 aa16.43■□□□□ 0.22
ZNF541-202ENST00000314121 RAPGEF6Q8TEU7 1601 aa16.43■□□□□ 0.22
ZNF541-202ENST00000314121 BTBD11A6QL63 1104 aa16.43■□□□□ 0.22
ZNF541-202ENST00000314121 SERPINC1P01008 464 aa16.43■□□□□ 0.22
ZNF541-202ENST00000314121 ATF3P18847 181 aa16.42■□□□□ 0.22
ZNF541-202ENST00000314121 SETQ01105 290 aaPredicted RBP16.42■□□□□ 0.22
ZNF541-202ENST00000314121 TAF7Q15545 349 aaPredicted RBP16.42■□□□□ 0.22
ZNF541-202ENST00000314121 WASLO00401 505 aaPredicted RBP16.42■□□□□ 0.22
ZNF541-202ENST00000314121 PRPF40BQ6NWY9 871 aaKnown RBP16.42■□□□□ 0.22
ZNF541-202ENST00000314121 SMC5Q8IY18 1101 aa16.42■□□□□ 0.22
ZNF541-202ENST00000314121 SYTL4Q96C24 671 aaPredicted RBP16.42■□□□□ 0.22
ZNF541-202ENST00000314121 PDCL3Q9H2J4 239 aa16.42■□□□□ 0.22
ZNF541-202ENST00000314121 G3V3G9 751 aa16.42■□□□□ 0.22
ZNF541-202ENST00000314121 FILIP1LQ4L180 1135 aa16.42■□□□□ 0.22
ZNF541-202ENST00000314121 DCAF8Q5TAQ9 597 aa16.42■□□□□ 0.22
ZNF541-202ENST00000314121 UHRF1BP1Q6BDS2 1440 aa16.42■□□□□ 0.22
ZNF541-202ENST00000314121 VPS53Q5VIR6 699 aa16.42■□□□□ 0.22
ZNF541-202ENST00000314121 LRRFIP2Q9Y608 721 aaKnown RBP16.41■□□□□ 0.22
ZNF541-202ENST00000314121 FYB1O15117 783 aa16.41■□□□□ 0.22
ZNF541-202ENST00000314121 SEC24BO95487 1268 aa16.41■□□□□ 0.22
ZNF541-202ENST00000314121 PANK2Q9BZ23 570 aa16.41■□□□□ 0.22
ZNF541-202ENST00000314121 FLIIQ13045 1269 aa16.41■□□□□ 0.22
ZNF541-202ENST00000314121 USP25Q9UHP3 1055 aa16.41■□□□□ 0.22
ZNF541-202ENST00000314121 PZPP20742 1482 aa16.4■□□□□ 0.22
ZNF541-202ENST00000314121 CTNNA3Q9UI47 895 aa16.4■□□□□ 0.22
ZNF541-202ENST00000314121 TNNQ9UQP3 1299 aa16.4■□□□□ 0.22
ZNF541-202ENST00000314121 PDCL2Q8N4E4 241 aa16.4■□□□□ 0.22
ZNF541-202ENST00000314121 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.4■□□□□ 0.22
ZNF541-202ENST00000314121 ITSN2Q9NZM3 1697 aa16.4■□□□□ 0.22
ZNF541-202ENST00000314121 TEX14Q8IWB6 1497 aa16.39■□□□□ 0.22
ZNF541-202ENST00000314121 SPINK5Q9NQ38 1064 aaPredicted RBP16.39■□□□□ 0.22
ZNF541-202ENST00000314121 KDM2BQ8NHM5 1336 aa16.39■□□□□ 0.21
ZNF541-202ENST00000314121 MYL6BP14649 208 aa16.39■□□□□ 0.21
ZNF541-202ENST00000314121 SDSP20132 328 aa16.39■□□□□ 0.21
ZNF541-202ENST00000314121 CD109Q6YHK3 1445 aa16.39■□□□□ 0.21
ZNF541-202ENST00000314121 TTC39AQ5SRH9 613 aa16.39■□□□□ 0.21
ZNF541-202ENST00000314121 ERCC4Q92889 916 aaPredicted RBP16.39■□□□□ 0.21
ZNF541-202ENST00000314121 PUS7Q96PZ0 661 aaKnown RBP16.39■□□□□ 0.21
ZNF541-202ENST00000314121 GDPD2Q9HCC8 539 aa16.39■□□□□ 0.21
ZNF541-202ENST00000314121 ZSCAN23Q3MJ62 389 aa16.38■□□□□ 0.21
ZNF541-202ENST00000314121 ANKRD44Q8N8A2 993 aa16.38■□□□□ 0.21
ZNF541-202ENST00000314121 SMARCE1Q969G3 411 aa16.38■□□□□ 0.21
ZNF541-202ENST00000314121 CARD14Q9BXL6 1004 aa16.38■□□□□ 0.21
ZNF541-202ENST00000314121 CAMK4Q16566 473 aa16.38■□□□□ 0.21
ZNF541-202ENST00000314121 DDX11Q96FC9 970 aa16.38■□□□□ 0.21
ZNF541-202ENST00000314121 RUFY1Q96T51 708 aa16.38■□□□□ 0.21
ZNF541-202ENST00000314121 INSRP06213 1382 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms