RNA–Protein interactions for RNA: ENST00000313433.11

RPA2-201, Transcript of replication protein A2, humanhuman

TSL 1 (best) BASIC

Gene RPA2, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA2-201ENST00000313433 AMER1Q5JTC6 1135 aaPredicted RBP25.2■■□□□ 1.62
RPA2-201ENST00000313433 PSDA5PKW4 1024 aaPredicted RBP25.19■■□□□ 1.62
RPA2-201ENST00000313433 PPM1GO15355 546 aaPredicted RBP25.18■■□□□ 1.62
RPA2-201ENST00000313433 PER1O15534 1290 aaPredicted RBP25.18■■□□□ 1.62
RPA2-201ENST00000313433 ACSBG1Q96GR2 724 aa25.17■■□□□ 1.62
RPA2-201ENST00000313433 PLSCR1O15162 318 aa25.16■■□□□ 1.62
RPA2-201ENST00000313433 TOGARAM1Q9Y4F4 1720 aa25.16■■□□□ 1.62
RPA2-201ENST00000313433 LRP5O75197 1615 aa25.15■■□□□ 1.62
RPA2-201ENST00000313433 PROM2Q8N271 834 aa25.15■■□□□ 1.62
RPA2-201ENST00000313433 DDX54Q8TDD1 881 aaKnown RBP25.14■■□□□ 1.62
RPA2-201ENST00000313433 PAPPAQ13219 1627 aa25.13■■□□□ 1.61
RPA2-201ENST00000313433 R3HDM1Q15032 1099 aaKnown RBP25.13■■□□□ 1.61
RPA2-201ENST00000313433 ZCRB1Q8TBF4 217 aaKnown RBP25.13■■□□□ 1.61
RPA2-201ENST00000313433 KNSTRNQ9Y448 316 aa25.13■■□□□ 1.61
RPA2-201ENST00000313433 EIF4A2Q14240 407 aaKnown RBP25.12■■□□□ 1.61
RPA2-201ENST00000313433 EYA1Q99502 592 aa25.12■■□□□ 1.61
RPA2-201ENST00000313433 KAT6BQ8WYB5 2073 aa25.12■■□□□ 1.61
RPA2-201ENST00000313433 MORC1Q86VD1 984 aa25.1■■□□□ 1.61
RPA2-201ENST00000313433 LY75O60449 1722 aa25.09■■□□□ 1.61
RPA2-201ENST00000313433 ANO8Q9HCE9 1232 aaPredicted RBP25.09■■□□□ 1.61
RPA2-201ENST00000313433 CASZ1Q86V15 1759 aa25.08■■□□□ 1.61
RPA2-201ENST00000313433 RAPGEF4Q8WZA2 1011 aa25.08■■□□□ 1.61
RPA2-201ENST00000313433 ITGB4P16144 1822 aa25.07■■□□□ 1.6
RPA2-201ENST00000313433 TATP17735 454 aaPredicted RBP25.07■■□□□ 1.6
RPA2-201ENST00000313433 IGSF1Q8N6C5 1336 aa25.06■■□□□ 1.6
RPA2-201ENST00000313433 CYP27B1O15528 508 aa25.05■■□□□ 1.6
RPA2-201ENST00000313433 TXNRD1Q16881 649 aa25.05■■□□□ 1.6
RPA2-201ENST00000313433 PRIM1P49642 420 aaKnown RBP25.03■■□□□ 1.6
RPA2-201ENST00000313433 PCDH11XQ9BZA7 1347 aa25.03■■□□□ 1.6
RPA2-201ENST00000313433 PCDH11YQ9BZA8 1340 aa25.03■■□□□ 1.6
RPA2-201ENST00000313433 NPC1L1Q9UHC9 1359 aa25.03■■□□□ 1.6
RPA2-201ENST00000313433 CC2D1BQ5T0F9 858 aaKnown RBP25.02■■□□□ 1.6
RPA2-201ENST00000313433 TUBGCP6Q96RT7 1819 aa25■■□□□ 1.59
RPA2-201ENST00000313433 COL3A1P02461 1466 aaPredicted RBP24.99■■□□□ 1.59
RPA2-201ENST00000313433 LRRC4BQ9NT99 713 aa24.98■■□□□ 1.59
RPA2-201ENST00000313433 IL13P35225 146 aa24.97■■□□□ 1.59
RPA2-201ENST00000313433 NBPF14Q5TI25 921 aa24.97■■□□□ 1.59
RPA2-201ENST00000313433 AEBP1Q8IUX7 1158 aa24.97■■□□□ 1.59
RPA2-201ENST00000313433 PDGFDQ9GZP0 370 aaPredicted RBP24.97■■□□□ 1.59
RPA2-201ENST00000313433 MTHFSP49914 203 aa24.96■■□□□ 1.59
RPA2-201ENST00000313433 SYTL4Q96C24 671 aaPredicted RBP24.96■■□□□ 1.59
RPA2-201ENST00000313433 QSER1Q2KHR3 1735 aa24.95■■□□□ 1.58
RPA2-201ENST00000313433 KDRP35968 1356 aa24.94■■□□□ 1.58
RPA2-201ENST00000313433 PLEKHG2Q9H7P9 1386 aa24.94■■□□□ 1.58
RPA2-201ENST00000313433 NKX1-1Q15270 411 aaPredicted RBP24.94■■□□□ 1.58
RPA2-201ENST00000313433 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.94■■□□□ 1.58
RPA2-201ENST00000313433 TAF1LQ8IZX4 1826 aa24.93■■□□□ 1.58
RPA2-201ENST00000313433 KCNQ4P56696 695 aa24.92■■□□□ 1.58
RPA2-201ENST00000313433 CNGB1Q14028 1251 aaPredicted RBP24.92■■□□□ 1.58
RPA2-201ENST00000313433 SPG7Q9UQ90 795 aa24.92■■□□□ 1.58
RPA2-201ENST00000313433 C5P01031 1676 aa24.91■■□□□ 1.58
RPA2-201ENST00000313433 PHKG2P15735 406 aa24.91■■□□□ 1.58
RPA2-201ENST00000313433 ZNF827Q17R98 1081 aa24.91■■□□□ 1.58
RPA2-201ENST00000313433 ZEB1P37275 1124 aaPredicted RBP24.9■■□□□ 1.58
RPA2-201ENST00000313433 SLC15A2Q16348 729 aa24.9■■□□□ 1.58
RPA2-201ENST00000313433 VIRMAQ69YN4 1812 aaKnown RBP24.89■■□□□ 1.57
RPA2-201ENST00000313433 KDM6AO15550 1401 aaPredicted RBP24.88■■□□□ 1.57
RPA2-201ENST00000313433 SULT6B1Q6IMI4 303 aa24.88■■□□□ 1.57
RPA2-201ENST00000313433 IFNL2Q8IZJ0 200 aa24.86■■□□□ 1.57
RPA2-201ENST00000313433 AKT1S1Q96B36 256 aa24.86■■□□□ 1.57
RPA2-201ENST00000313433 STK32BQ9NY57 414 aa24.86■■□□□ 1.57
RPA2-201ENST00000313433 SCN11AQ9UI33 1791 aa24.85■■□□□ 1.57
RPA2-201ENST00000313433 SLC27A3Q5K4L6 730 aa24.85■■□□□ 1.57
RPA2-201ENST00000313433 MPRIPQ6WCQ1 1025 aa24.85■■□□□ 1.57
RPA2-201ENST00000313433 PIGBQ92521 554 aa24.85■■□□□ 1.57
RPA2-201ENST00000313433 COL24A1Q17RW2 1714 aa24.83■■□□□ 1.57
RPA2-201ENST00000313433 PALLDQ8WX93 1383 aa24.83■■□□□ 1.57
RPA2-201ENST00000313433 ADAMTS7Q9UKP4 1686 aa24.81■■□□□ 1.56
RPA2-201ENST00000313433 CCNL1Q9UK58 526 aaPredicted RBP24.81■■□□□ 1.56
RPA2-201ENST00000313433 DIAPH1O60610 1272 aaKnown RBP24.8■■□□□ 1.56
RPA2-201ENST00000313433 HMOX1P09601 288 aa24.8■■□□□ 1.56
RPA2-201ENST00000313433 PLEKHO1Q53GL0 409 aaPredicted RBP24.8■■□□□ 1.56
RPA2-201ENST00000313433 ZNF530Q6P9A1 599 aaPredicted RBP24.8■■□□□ 1.56
RPA2-201ENST00000313433 C4BP0C0L5 1744 aa24.8■■□□□ 1.56
RPA2-201ENST00000313433 ZBTB7AO95365 584 aa24.79■■□□□ 1.56
RPA2-201ENST00000313433 DDX10Q13206 875 aaKnown RBP24.79■■□□□ 1.56
RPA2-201ENST00000313433 UBR3Q6ZT12 1888 aa24.77■■□□□ 1.56
RPA2-201ENST00000313433 PPP2R1AP30153 589 aa24.77■■□□□ 1.56
RPA2-201ENST00000313433 AMOTQ4VCS5 1084 aa24.77■■□□□ 1.56
RPA2-201ENST00000313433 SPON1Q9HCB6 807 aa24.77■■□□□ 1.56
RPA2-201ENST00000313433 ASAP1Q9ULH1 1129 aa24.77■■□□□ 1.56
RPA2-201ENST00000313433 PNPLA7Q6ZV29 1317 aa24.77■■□□□ 1.56
RPA2-201ENST00000313433 ZNF831Q5JPB2 1677 aa24.76■■□□□ 1.55
RPA2-201ENST00000313433 PTGER2P43116 358 aa24.76■■□□□ 1.55
RPA2-201ENST00000313433 DCAF5Q96JK2 942 aa24.75■■□□□ 1.55
RPA2-201ENST00000313433 TMOD3Q9NYL9 352 aa24.75■■□□□ 1.55
RPA2-201ENST00000313433 COL5A3P25940 1745 aaPredicted RBP24.75■■□□□ 1.55
RPA2-201ENST00000313433 SGIP1Q9BQI5 828 aa24.74■■□□□ 1.55
RPA2-201ENST00000313433 ATG3Q9NT62 314 aa24.74■■□□□ 1.55
RPA2-201ENST00000313433 MRC1P22897 1456 aa24.74■■□□□ 1.55
RPA2-201ENST00000313433 ATF5Q9Y2D1 282 aaPredicted RBP24.73■■□□□ 1.55
RPA2-201ENST00000313433 ERVV-2B6SEH9 535 aa24.72■■□□□ 1.55
RPA2-201ENST00000313433 AMIGO3Q86WK7 504 aa24.72■■□□□ 1.55
RPA2-201ENST00000313433 SMARCC1Q92922 1105 aaPredicted RBP24.72■■□□□ 1.55
RPA2-201ENST00000313433 TJP1Q07157 1748 aa24.71■■□□□ 1.55
RPA2-201ENST00000313433 HSP90AB1P08238 724 aaKnown RBP24.7■■□□□ 1.54
RPA2-201ENST00000313433 ITPK1Q13572 414 aa24.7■■□□□ 1.54
RPA2-201ENST00000313433 MTHFSDQ2M296 383 aaKnown RBP24.7■■□□□ 1.54
RPA2-201ENST00000313433 SLC4A9Q96Q91 983 aa24.7■■□□□ 1.54
RPA2-201ENST00000313433 CICQ96RK0 1608 aaPredicted RBP24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms