RNA–Protein interactions for RNA: ENST00000311388.7

DEPDC7-202, Transcript of DEP domain containing 7, humanhuman

TSL 1 (best) BASIC

Gene DEPDC7, Length 2,012 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-202ENST00000311388 IGHDP01880 384 aa20.46■□□□□ 0.87
DEPDC7-202ENST00000311388 TWISTNBQ3B726 338 aaPredicted RBP20.46■□□□□ 0.87
DEPDC7-202ENST00000311388 NBPF6Q5VWK0 638 aa20.46■□□□□ 0.87
DEPDC7-202ENST00000311388 NBPF4Q96M43 638 aa20.46■□□□□ 0.87
DEPDC7-202ENST00000311388 KIF16BQ96L93 1317 aa20.46■□□□□ 0.87
DEPDC7-202ENST00000311388 MED1Q15648 1581 aaPredicted RBP20.46■□□□□ 0.87
DEPDC7-202ENST00000311388 MRPL50Q8N5N7 158 aaKnown RBP20.46■□□□□ 0.87
DEPDC7-202ENST00000311388 TCERG1O14776 1098 aaKnown RBP20.45■□□□□ 0.86
DEPDC7-202ENST00000311388 MS4A1P11836 297 aa20.45■□□□□ 0.86
DEPDC7-202ENST00000311388 AAMPQ13685 434 aa20.45■□□□□ 0.86
DEPDC7-202ENST00000311388 FTSJ3Q8IY81 847 aaKnown RBP20.45■□□□□ 0.86
DEPDC7-202ENST00000311388 LRRC37A3O60309 1634 aa20.43■□□□□ 0.86
DEPDC7-202ENST00000311388 ZNF335Q9H4Z2 1342 aaPredicted RBP20.43■□□□□ 0.86
DEPDC7-202ENST00000311388 IPO8O15397 1037 aaKnown RBP20.43■□□□□ 0.86
DEPDC7-202ENST00000311388 RTF1Q92541 710 aaKnown RBP20.43■□□□□ 0.86
DEPDC7-202ENST00000311388 PCDHB15Q9Y5E8 787 aa20.43■□□□□ 0.86
DEPDC7-202ENST00000311388 HTATSF1O43719 755 aaKnown RBP20.42■□□□□ 0.86
DEPDC7-202ENST00000311388 KRT24Q2M2I5 525 aa20.42■□□□□ 0.86
DEPDC7-202ENST00000311388 LRRC59Q96AG4 307 aaKnown RBP20.42■□□□□ 0.86
DEPDC7-202ENST00000311388 PXDNQ92626 1479 aa20.42■□□□□ 0.86
DEPDC7-202ENST00000311388 TMEM57Q8N5G2 664 aa20.41■□□□□ 0.86
DEPDC7-202ENST00000311388 AXIN2Q9Y2T1 843 aa20.41■□□□□ 0.86
DEPDC7-202ENST00000311388 NPHP3Q7Z494 1330 aa20.41■□□□□ 0.86
DEPDC7-202ENST00000311388 GNAT3A8MTJ3 354 aa20.4■□□□□ 0.86
DEPDC7-202ENST00000311388 MIS18AQ9NYP9 233 aa20.4■□□□□ 0.86
DEPDC7-202ENST00000311388 KIAA0232Q92628 1395 aa20.4■□□□□ 0.86
DEPDC7-202ENST00000311388 MAP3K5Q99683 1374 aa20.39■□□□□ 0.86
DEPDC7-202ENST00000311388 NCAPD2Q15021 1401 aa20.39■□□□□ 0.86
DEPDC7-202ENST00000311388 RGPD5Q99666 1765 aa20.39■□□□□ 0.86
DEPDC7-202ENST00000311388 ITPRIPQ8IWB1 547 aa20.38■□□□□ 0.85
DEPDC7-202ENST00000311388 IL17REQ8NFR9 667 aa20.38■□□□□ 0.85
DEPDC7-202ENST00000311388 ANKRD24Q8TF21 1146 aa20.38■□□□□ 0.85
DEPDC7-202ENST00000311388 ARHGAP45Q92619 1136 aa20.38■□□□□ 0.85
DEPDC7-202ENST00000311388 CAMTA1Q9Y6Y1 1673 aa20.38■□□□□ 0.85
DEPDC7-202ENST00000311388 TNS3Q68CZ2 1445 aa20.38■□□□□ 0.85
DEPDC7-202ENST00000311388 ZC3H6P61129 1189 aaKnown RBP20.37■□□□□ 0.85
DEPDC7-202ENST00000311388 BRINP3Q76B58 766 aa20.37■□□□□ 0.85
DEPDC7-202ENST00000311388 DDX19BQ9UMR2 479 aa20.37■□□□□ 0.85
DEPDC7-202ENST00000311388 CRYBG1Q9Y4K1 1723 aa20.37■□□□□ 0.85
DEPDC7-202ENST00000311388 TSPYL4Q9UJ04 414 aa20.36■□□□□ 0.85
DEPDC7-202ENST00000311388 SPATA31A3Q5VYP0 1347 aa20.35■□□□□ 0.85
DEPDC7-202ENST00000311388 COL18A1P39060 1754 aa20.34■□□□□ 0.85
DEPDC7-202ENST00000311388 CABLES1Q8TDN4 633 aa20.34■□□□□ 0.85
DEPDC7-202ENST00000311388 ZBTB40Q9NUA8 1239 aa20.33■□□□□ 0.85
DEPDC7-202ENST00000311388 ABCC4O15439 1325 aa20.33■□□□□ 0.84
DEPDC7-202ENST00000311388 LMO7Q8WWI1 1683 aa20.33■□□□□ 0.84
DEPDC7-202ENST00000311388 PDE4AP27815 886 aa20.32■□□□□ 0.84
DEPDC7-202ENST00000311388 SLAIN2Q9P270 581 aa20.32■□□□□ 0.84
DEPDC7-202ENST00000311388 ERBB3P21860 1342 aa20.31■□□□□ 0.84
DEPDC7-202ENST00000311388 CEMIPQ8WUJ3 1361 aa20.31■□□□□ 0.84
DEPDC7-202ENST00000311388 HAP1P54257 671 aaPredicted RBP20.31■□□□□ 0.84
DEPDC7-202ENST00000311388 BACH2Q9BYV9 841 aa20.3■□□□□ 0.84
DEPDC7-202ENST00000311388 RWDD1Q9H446 243 aaPredicted RBP20.3■□□□□ 0.84
DEPDC7-202ENST00000311388 TAF7Q15545 349 aaPredicted RBP20.29■□□□□ 0.84
DEPDC7-202ENST00000311388 PLEKHO1Q53GL0 409 aaPredicted RBP20.29■□□□□ 0.84
DEPDC7-202ENST00000311388 API5Q9BZZ5 524 aaKnown RBP20.29■□□□□ 0.84
DEPDC7-202ENST00000311388 LGR6Q9HBX8 967 aa20.29■□□□□ 0.84
DEPDC7-202ENST00000311388 RGS12O14924 1447 aa20.29■□□□□ 0.84
DEPDC7-202ENST00000311388 ZBTB7BO15156 539 aaPredicted RBP20.28■□□□□ 0.84
DEPDC7-202ENST00000311388 RGS3P49796 1198 aa20.28■□□□□ 0.84
DEPDC7-202ENST00000311388 BABAM1Q9NWV8 329 aa20.28■□□□□ 0.84
DEPDC7-202ENST00000311388 ZNF530Q6P9A1 599 aaPredicted RBP20.27■□□□□ 0.84
DEPDC7-202ENST00000311388 AMOTQ4VCS5 1084 aa20.27■□□□□ 0.84
DEPDC7-202ENST00000311388 AKAP4Q5JQC9 854 aa20.27■□□□□ 0.84
DEPDC7-202ENST00000311388 SOS2Q07890 1332 aaPredicted RBP20.27■□□□□ 0.83
DEPDC7-202ENST00000311388 HDAC1Q13547 482 aaPredicted RBP20.26■□□□□ 0.83
DEPDC7-202ENST00000311388 FAM208AQ9UK61 1670 aaKnown RBP20.26■□□□□ 0.83
DEPDC7-202ENST00000311388 CHRNA2Q15822 529 aa20.26■□□□□ 0.83
DEPDC7-202ENST00000311388 ABCC6O95255 1503 aa20.25■□□□□ 0.83
DEPDC7-202ENST00000311388 CPDO75976 1380 aa20.25■□□□□ 0.83
DEPDC7-202ENST00000311388 VIRMAQ69YN4 1812 aaKnown RBP20.24■□□□□ 0.83
DEPDC7-202ENST00000311388 SLC4A2P04920 1241 aa20.24■□□□□ 0.83
DEPDC7-202ENST00000311388 PDZRN3Q9UPQ7 1066 aa20.24■□□□□ 0.83
DEPDC7-202ENST00000311388 KDM3BQ7LBC6 1761 aa20.23■□□□□ 0.83
DEPDC7-202ENST00000311388 PTPRCP08575 1304 aa20.22■□□□□ 0.83
DEPDC7-202ENST00000311388 MPRIPQ6WCQ1 1025 aa20.22■□□□□ 0.83
DEPDC7-202ENST00000311388 G2E3Q7L622 706 aa20.22■□□□□ 0.83
DEPDC7-202ENST00000311388 NLRP2Q9NX02 1062 aa20.22■□□□□ 0.83
DEPDC7-202ENST00000311388 INTS3Q68E01 1043 aaKnown RBP20.22■□□□□ 0.83
DEPDC7-202ENST00000311388 RNMTO43148 476 aaKnown RBP20.2■□□□□ 0.83
DEPDC7-202ENST00000311388 C1orf141Q5JVX7 400 aa20.2■□□□□ 0.83
DEPDC7-202ENST00000311388 ADAMTS7Q9UKP4 1686 aa20.2■□□□□ 0.82
DEPDC7-202ENST00000311388 NHSL1Q5SYE7 1610 aa20.2■□□□□ 0.82
DEPDC7-202ENST00000311388 SOS1Q07889 1333 aaPredicted RBP20.2■□□□□ 0.82
DEPDC7-202ENST00000311388 CHMP4BQ9H444 224 aaKnown RBP20.2■□□□□ 0.82
DEPDC7-202ENST00000311388 C8orf34Q49A92 452 aa20.19■□□□□ 0.82
DEPDC7-202ENST00000311388 SMC5Q8IY18 1101 aa20.19■□□□□ 0.82
DEPDC7-202ENST00000311388 C1orf115Q9H7X2 142 aa20.19■□□□□ 0.82
DEPDC7-202ENST00000311388 OVOS2A0A0G2JMS6 1433 aa20.19■□□□□ 0.82
DEPDC7-202ENST00000311388 ABCA3Q99758 1704 aa20.18■□□□□ 0.82
DEPDC7-202ENST00000311388 MEGF6O75095 1541 aa20.18■□□□□ 0.82
DEPDC7-202ENST00000311388 KCNQ3O43525 872 aa20.18■□□□□ 0.82
DEPDC7-202ENST00000311388 MSH5O43196 834 aa20.17■□□□□ 0.82
DEPDC7-202ENST00000311388 CSB-PGBD3P0DP91 1061 aa20.17■□□□□ 0.82
DEPDC7-202ENST00000311388 EIF4A1P60842 406 aaKnown RBP20.17■□□□□ 0.82
DEPDC7-202ENST00000311388 TEFQ10587 303 aa20.17■□□□□ 0.82
DEPDC7-202ENST00000311388 FAM161AQ3B820 660 aa20.17■□□□□ 0.82
DEPDC7-202ENST00000311388 CCDC30Q5VVM6 783 aa20.17■□□□□ 0.82
DEPDC7-202ENST00000311388 SIPA1L3O60292 1781 aaPredicted RBP20.17■□□□□ 0.82
DEPDC7-202ENST00000311388 RAPGEF4Q8WZA2 1011 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms