RNA–Protein interactions for RNA: ENST00000311034.6

NPAS4-201, Transcript of neuronal PAS domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPAS4, Length 3,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4-201ENST00000311034 GPT2Q8TD30 523 aa16.57■□□□□ 0.24
NPAS4-201ENST00000311034 PDCL3Q9H2J4 239 aa16.57■□□□□ 0.24
NPAS4-201ENST00000311034 ANO2Q9NQ90 1003 aa16.57■□□□□ 0.24
NPAS4-201ENST00000311034 INO80Q9ULG1 1556 aaPredicted RBP16.57■□□□□ 0.24
NPAS4-201ENST00000311034 FOXO3O43524 673 aa16.56■□□□□ 0.24
NPAS4-201ENST00000311034 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.56■□□□□ 0.24
NPAS4-201ENST00000311034 ADGRB1O14514 1584 aa16.56■□□□□ 0.24
NPAS4-201ENST00000311034 ASXL2Q76L83 1435 aa16.55■□□□□ 0.24
NPAS4-201ENST00000311034 MEIS3Q99687 375 aa16.55■□□□□ 0.24
NPAS4-201ENST00000311034 IFT57Q9NWB7 429 aa16.55■□□□□ 0.24
NPAS4-201ENST00000311034 TMEM63CQ9P1W3 806 aa16.55■□□□□ 0.24
NPAS4-201ENST00000311034 ADGRB3O60242 1522 aa16.55■□□□□ 0.24
NPAS4-201ENST00000311034 FKBP5Q13451 457 aaPredicted RBP16.54■□□□□ 0.24
NPAS4-201ENST00000311034 REC8O95072 547 aa16.54■□□□□ 0.24
NPAS4-201ENST00000311034 NCBP3Q53F19 620 aaKnown RBP16.54■□□□□ 0.24
NPAS4-201ENST00000311034 DCTPP1Q9H773 170 aa16.53■□□□□ 0.24
NPAS4-201ENST00000311034 ADGRB2O60241 1585 aa16.53■□□□□ 0.24
NPAS4-201ENST00000311034 AMPHP49418 695 aa16.53■□□□□ 0.24
NPAS4-201ENST00000311034 ZNF445P59923 1031 aa16.53■□□□□ 0.24
NPAS4-201ENST00000311034 NGDNQ8NEJ9 315 aaKnown RBP16.53■□□□□ 0.24
NPAS4-201ENST00000311034 ARHGAP45Q92619 1136 aa16.53■□□□□ 0.24
NPAS4-201ENST00000311034 ANXA1P04083 346 aa16.53■□□□□ 0.24
NPAS4-201ENST00000311034 ABCC4O15439 1325 aa16.53■□□□□ 0.24
NPAS4-201ENST00000311034 CFAP74Q9C0B2 1584 aa16.52■□□□□ 0.24
NPAS4-201ENST00000311034 USHBP1Q8N6Y0 703 aa16.52■□□□□ 0.24
NPAS4-201ENST00000311034 GLI2P10070 1586 aa16.52■□□□□ 0.24
NPAS4-201ENST00000311034 PRDM10Q9NQV6 1147 aa16.52■□□□□ 0.24
NPAS4-201ENST00000311034 MYO3AQ8NEV4 1616 aa16.52■□□□□ 0.23
NPAS4-201ENST00000311034 SETBP1Q9Y6X0 1596 aa16.52■□□□□ 0.23
NPAS4-201ENST00000311034 FAM69CQ0P6D2 419 aa16.52■□□□□ 0.23
NPAS4-201ENST00000311034 ZNF830Q96NB3 372 aaPredicted RBP16.52■□□□□ 0.23
NPAS4-201ENST00000311034 ERC2O15083 957 aa16.51■□□□□ 0.23
NPAS4-201ENST00000311034 CFAP44Q96MT7 982 aa16.51■□□□□ 0.23
NPAS4-201ENST00000311034 NAP1L2Q9ULW6 460 aaPredicted RBP16.51■□□□□ 0.23
NPAS4-201ENST00000311034 HSP90AB2PQ58FF8 381 aa16.51■□□□□ 0.23
NPAS4-201ENST00000311034 PUS7Q96PZ0 661 aaKnown RBP16.51■□□□□ 0.23
NPAS4-201ENST00000311034 CWC22Q9HCG8 908 aaKnown RBP16.51■□□□□ 0.23
NPAS4-201ENST00000311034 TSPYL4Q9UJ04 414 aa16.51■□□□□ 0.23
NPAS4-201ENST00000311034 ZDHHC9Q9Y397 364 aa16.5■□□□□ 0.23
NPAS4-201ENST00000311034 ARAP3Q8WWN8 1544 aa16.5■□□□□ 0.23
NPAS4-201ENST00000311034 PPFIA3O75145 1194 aa16.5■□□□□ 0.23
NPAS4-201ENST00000311034 LMOD3Q0VAK6 560 aa16.5■□□□□ 0.23
NPAS4-201ENST00000311034 CEP85Q6P2H3 762 aa16.5■□□□□ 0.23
NPAS4-201ENST00000311034 LRRC7Q96NW7 1537 aa16.5■□□□□ 0.23
NPAS4-201ENST00000311034 NOL7Q9UMY1 257 aaKnown RBP16.5■□□□□ 0.23
NPAS4-201ENST00000311034 KCNJ4P48050 445 aa16.49■□□□□ 0.23
NPAS4-201ENST00000311034 TMX3Q96JJ7 454 aa16.49■□□□□ 0.23
NPAS4-201ENST00000311034 LRSAM1Q6UWE0 723 aa16.49■□□□□ 0.23
NPAS4-201ENST00000311034 ANKRD44Q8N8A2 993 aa16.49■□□□□ 0.23
NPAS4-201ENST00000311034 FOSBP53539 338 aa16.48■□□□□ 0.23
NPAS4-201ENST00000311034 TSC1Q92574 1164 aa16.48■□□□□ 0.23
NPAS4-201ENST00000311034 ZKSCAN5Q9Y2L8 839 aa16.48■□□□□ 0.23
NPAS4-201ENST00000311034 IFT172Q9UG01 1749 aa16.48■□□□□ 0.23
NPAS4-201ENST00000311034 A0A0G2JS52 829 aa16.48■□□□□ 0.23
NPAS4-201ENST00000311034 JARID2Q92833 1246 aaPredicted RBP16.48■□□□□ 0.23
NPAS4-201ENST00000311034 CCDC39Q9UFE4 941 aa16.48■□□□□ 0.23
NPAS4-201ENST00000311034 COL3A1P02461 1466 aaPredicted RBP16.48■□□□□ 0.23
NPAS4-201ENST00000311034 CEBPAP49715 358 aaPredicted RBP16.48■□□□□ 0.23
NPAS4-201ENST00000311034 NEURL4Q96JN8 1562 aa16.48■□□□□ 0.23
NPAS4-201ENST00000311034 KIDINS220Q9ULH0 1771 aa16.48■□□□□ 0.23
NPAS4-201ENST00000311034 MSH6P52701 1360 aa16.47■□□□□ 0.23
NPAS4-201ENST00000311034 FAM177BA6PVY3 158 aa16.47■□□□□ 0.23
NPAS4-201ENST00000311034 NUTM1Q86Y26 1132 aa16.47■□□□□ 0.23
NPAS4-201ENST00000311034 TSPY26PQ9H489 355 aa16.47■□□□□ 0.23
NPAS4-201ENST00000311034 ABCA9Q8IUA7 1624 aa16.47■□□□□ 0.23
NPAS4-201ENST00000311034 MCCP23508 829 aa16.46■□□□□ 0.23
NPAS4-201ENST00000311034 C17orf53Q8N3J3 647 aaPredicted RBP16.46■□□□□ 0.23
NPAS4-201ENST00000311034 HMMRO75330 724 aa16.46■□□□□ 0.23
NPAS4-201ENST00000311034 IL13P35225 146 aa16.46■□□□□ 0.23
NPAS4-201ENST00000311034 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.46■□□□□ 0.23
NPAS4-201ENST00000311034 PTCH1Q13635 1447 aa16.45■□□□□ 0.22
NPAS4-201ENST00000311034 RPAP2Q8IXW5 612 aaPredicted RBP16.45■□□□□ 0.22
NPAS4-201ENST00000311034 STK31Q9BXU1 1019 aa16.45■□□□□ 0.22
NPAS4-201ENST00000311034 MED14O60244 1454 aa16.45■□□□□ 0.22
NPAS4-201ENST00000311034 FAM135BQ49AJ0 1406 aa16.45■□□□□ 0.22
NPAS4-201ENST00000311034 CYP2E1P05181 493 aaPredicted RBP16.45■□□□□ 0.22
NPAS4-201ENST00000311034 G2E3Q7L622 706 aa16.45■□□□□ 0.22
NPAS4-201ENST00000311034 PALD1Q9ULE6 856 aa16.45■□□□□ 0.22
NPAS4-201ENST00000311034 CAMSAP1Q5T5Y3 1602 aa16.45■□□□□ 0.22
NPAS4-201ENST00000311034 CLEC17AQ6ZS10 378 aa16.45■□□□□ 0.22
NPAS4-201ENST00000311034 GADD45BO75293 160 aaPredicted RBP16.44■□□□□ 0.22
NPAS4-201ENST00000311034 AIMP1Q12904 312 aaKnown RBP16.44■□□□□ 0.22
NPAS4-201ENST00000311034 FBXW7Q969H0 707 aa16.44■□□□□ 0.22
NPAS4-201ENST00000311034 YTHDC2Q9H6S0 1430 aaKnown RBP16.44■□□□□ 0.22
NPAS4-201ENST00000311034 BRPF1P55201 1214 aaPredicted RBP16.44■□□□□ 0.22
NPAS4-201ENST00000311034 NUDT16Q96DE0 195 aaKnown RBP16.44■□□□□ 0.22
NPAS4-201ENST00000311034 USP25Q9UHP3 1055 aa16.44■□□□□ 0.22
NPAS4-201ENST00000311034 PPLO60437 1756 aa16.44■□□□□ 0.22
NPAS4-201ENST00000311034 IBTKQ9P2D0 1353 aaPredicted RBP16.44■□□□□ 0.22
NPAS4-201ENST00000311034 MBD3O95983 291 aa16.44■□□□□ 0.22
NPAS4-201ENST00000311034 CSPP1Q1MSJ5 1256 aa16.44■□□□□ 0.22
NPAS4-201ENST00000311034 PDE1AP54750 535 aa16.43■□□□□ 0.22
NPAS4-201ENST00000311034 OSCARQ8IYS5 282 aa16.43■□□□□ 0.22
NPAS4-201ENST00000311034 ZNF330Q9Y3S2 320 aaPredicted RBP16.43■□□□□ 0.22
NPAS4-201ENST00000311034 ZNF853P0CG23 659 aa16.43■□□□□ 0.22
NPAS4-201ENST00000311034 ZC3H13Q5T200 1668 aaKnown RBP16.43■□□□□ 0.22
NPAS4-201ENST00000311034 SYAP1Q96A49 352 aaPredicted RBP16.43■□□□□ 0.22
NPAS4-201ENST00000311034 LMTK2Q8IWU2 1503 aa16.42■□□□□ 0.22
NPAS4-201ENST00000311034 KIAA2012Q0VF49 1180 aa16.42■□□□□ 0.22
NPAS4-201ENST00000311034 SLC52A1Q9NWF4 448 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms