RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 HSP90AB2PQ58FF8 381 aa15.5■□□□□ 0.07
SNED1-201ENST00000310397 NEMFO60524 1076 aa15.49■□□□□ 0.07
SNED1-201ENST00000310397 CTNNA3Q9UI47 895 aa15.49■□□□□ 0.07
SNED1-201ENST00000310397 CASTP20810 708 aaKnown RBP15.49■□□□□ 0.07
SNED1-201ENST00000310397 FILIP1Q7Z7B0 1213 aa15.49■□□□□ 0.07
SNED1-201ENST00000310397 DEF6Q9H4E7 631 aa15.49■□□□□ 0.07
SNED1-201ENST00000310397 CTTNBP2Q8WZ74 1663 aa15.49■□□□□ 0.07
SNED1-201ENST00000310397 CTAGE5O15320 804 aa15.49■□□□□ 0.07
SNED1-201ENST00000310397 SFPQP23246 707 aaKnown RBP eCLIP15.49■□□□□ 0.07
SNED1-201ENST00000310397 C20orf194Q5TEA3 1177 aa15.49■□□□□ 0.07
SNED1-201ENST00000310397 TMCO3Q6UWJ1 677 aa15.49■□□□□ 0.07
SNED1-201ENST00000310397 CDK13Q14004 1512 aaKnown RBP15.49■□□□□ 0.07
SNED1-201ENST00000310397 SRGAP3O43295 1099 aa15.49■□□□□ 0.07
SNED1-201ENST00000310397 CGNQ9P2M7 1197 aaKnown RBP15.49■□□□□ 0.07
SNED1-201ENST00000310397 CDK19Q9BWU1 502 aa15.49■□□□□ 0.07
SNED1-201ENST00000310397 DUSP27Q5VZP5 1158 aa15.48■□□□□ 0.07
SNED1-201ENST00000310397 PRG4Q92954 1404 aaPredicted RBP15.48■□□□□ 0.07
SNED1-201ENST00000310397 CDK5RAP3Q96JB5 506 aa15.48■□□□□ 0.07
SNED1-201ENST00000310397 CAVIN2O95810 425 aa15.48■□□□□ 0.07
SNED1-201ENST00000310397 CWC27Q6UX04 472 aaKnown RBP15.48■□□□□ 0.07
SNED1-201ENST00000310397 STK3Q13188 491 aa15.48■□□□□ 0.07
SNED1-201ENST00000310397 BMP2KLQ5H9B9 411 aa15.48■□□□□ 0.07
SNED1-201ENST00000310397 CCDC181Q5TID7 509 aa15.48■□□□□ 0.07
SNED1-201ENST00000310397 CCAR1Q8IX12 1150 aaKnown RBP15.48■□□□□ 0.07
SNED1-201ENST00000310397 AFAP1Q8N556 730 aa15.48■□□□□ 0.07
SNED1-201ENST00000310397 MPNDQ8N594 471 aa15.48■□□□□ 0.07
SNED1-201ENST00000310397 ABTB2Q8N961 1025 aa15.48■□□□□ 0.07
SNED1-201ENST00000310397 ZSCAN12O43309 604 aa15.48■□□□□ 0.07
SNED1-201ENST00000310397 ZSCAN25Q6NSZ9 544 aa15.48■□□□□ 0.07
SNED1-201ENST00000310397 KIF1BPQ96EK5 621 aa15.48■□□□□ 0.07
SNED1-201ENST00000310397 C11orf95C9JLR9 678 aaPredicted RBP15.47■□□□□ 0.07
SNED1-201ENST00000310397 CALCOCO1Q9P1Z2 691 aa15.47■□□□□ 0.07
SNED1-201ENST00000310397 GLRX3O76003 335 aaKnown RBP15.47■□□□□ 0.07
SNED1-201ENST00000310397 SSH1Q8WYL5 1049 aa15.47■□□□□ 0.07
SNED1-201ENST00000310397 RAD21O60216 631 aa15.47■□□□□ 0.07
SNED1-201ENST00000310397 ANO10Q9NW15 660 aa15.47■□□□□ 0.07
SNED1-201ENST00000310397 KLHL40Q2TBA0 621 aa15.47■□□□□ 0.07
SNED1-201ENST00000310397 PRIMPOLQ96LW4 560 aa15.47■□□□□ 0.07
SNED1-201ENST00000310397 NESP48681 1621 aa15.47■□□□□ 0.07
SNED1-201ENST00000310397 MCM3P25205 808 aa15.46■□□□□ 0.07
SNED1-201ENST00000310397 FAM177A1Q8N128 213 aaPredicted RBP15.46■□□□□ 0.07
SNED1-201ENST00000310397 NACAP1Q9BZK3 213 aa15.46■□□□□ 0.07
SNED1-201ENST00000310397 MAP9Q49MG5 647 aa15.46■□□□□ 0.07
SNED1-201ENST00000310397 ATP2B1P20020 1258 aa15.46■□□□□ 0.07
SNED1-201ENST00000310397 CLCN1P35523 988 aa15.46■□□□□ 0.07
SNED1-201ENST00000310397 AACSQ86V21 672 aa15.46■□□□□ 0.06
SNED1-201ENST00000310397 CTDP1Q9Y5B0 961 aaPredicted RBP15.46■□□□□ 0.06
SNED1-201ENST00000310397 CABP1Q9NZU7 370 aa15.45■□□□□ 0.06
SNED1-201ENST00000310397 TTC39AQ5SRH9 613 aa15.45■□□□□ 0.06
SNED1-201ENST00000310397 KIF6Q6ZMV9 814 aa15.45■□□□□ 0.06
SNED1-201ENST00000310397 EPB41L2O43491 1005 aaKnown RBP15.45■□□□□ 0.06
SNED1-201ENST00000310397 MX1P20591 662 aa15.45■□□□□ 0.06
SNED1-201ENST00000310397 WASF1Q92558 559 aa15.44■□□□□ 0.06
SNED1-201ENST00000310397 CFAP100Q494V2 611 aa15.44■□□□□ 0.06
SNED1-201ENST00000310397 NOL7Q9UMY1 257 aaKnown RBP15.44■□□□□ 0.06
SNED1-201ENST00000310397 THOC2Q8NI27 1593 aaKnown RBP15.44■□□□□ 0.06
SNED1-201ENST00000310397 RTEL1-TNFRSF6BF6WH68 1400 aa15.44■□□□□ 0.06
SNED1-201ENST00000310397 CFAP65Q6ZU64 1925 aaKnown RBP15.44■□□□□ 0.06
SNED1-201ENST00000310397 GSDMDP57764 484 aa15.44■□□□□ 0.06
SNED1-201ENST00000310397 UVSSAQ2YD98 709 aa15.44■□□□□ 0.06
SNED1-201ENST00000310397 ARHGAP29Q52LW3 1261 aa15.44■□□□□ 0.06
SNED1-201ENST00000310397 CCDC69A6NI79 296 aa15.44■□□□□ 0.06
SNED1-201ENST00000310397 U3KPZ7 1027 aaPredicted RBP15.44■□□□□ 0.06
SNED1-201ENST00000310397 RBM33Q96EV2 1170 aaKnown RBP15.43■□□□□ 0.06
SNED1-201ENST00000310397 NLRP2Q9NX02 1062 aa15.43■□□□□ 0.06
SNED1-201ENST00000310397 CEP131Q9UPN4 1083 aa15.43■□□□□ 0.06
SNED1-201ENST00000310397 IFT140Q96RY7 1462 aa15.43■□□□□ 0.06
SNED1-201ENST00000310397 CCDC148Q8NFR7 591 aa15.43■□□□□ 0.06
SNED1-201ENST00000310397 UBE2Q2Q8WVN8 375 aa15.43■□□□□ 0.06
SNED1-201ENST00000310397 XPCQ01831 940 aaPredicted RBP15.42■□□□□ 0.06
SNED1-201ENST00000310397 BAG4O95429 457 aaKnown RBP15.42■□□□□ 0.06
SNED1-201ENST00000310397 SYCP1Q15431 976 aa15.42■□□□□ 0.06
SNED1-201ENST00000310397 SYTL4Q96C24 671 aaPredicted RBP15.42■□□□□ 0.06
SNED1-201ENST00000310397 CRACR2AQ9BSW2 395 aa15.42■□□□□ 0.06
SNED1-201ENST00000310397 LIMCH1Q9UPQ0 1083 aa15.42■□□□□ 0.06
SNED1-201ENST00000310397 NSD2O96028 1365 aa15.42■□□□□ 0.06
SNED1-201ENST00000310397 GNL3LQ9NVN8 582 aaKnown RBP15.42■□□□□ 0.06
SNED1-201ENST00000310397 ABCA10Q8WWZ4 1543 aa15.42■□□□□ 0.06
SNED1-201ENST00000310397 MAP4K4O95819 1239 aaPredicted RBP15.42■□□□□ 0.06
SNED1-201ENST00000310397 HMGB1P09429 215 aaKnown RBP15.42■□□□□ 0.06
SNED1-201ENST00000310397 SSFA2P28290 1259 aa15.42■□□□□ 0.06
SNED1-201ENST00000310397 CCDC102AQ96A19 550 aa15.42■□□□□ 0.06
SNED1-201ENST00000310397 DDX19AQ9NUU7 478 aaKnown RBP15.42■□□□□ 0.06
SNED1-201ENST00000310397 ERICH4A6NGS2 130 aa15.41■□□□□ 0.06
SNED1-201ENST00000310397 PAXBP1Q9Y5B6 917 aa15.41■□□□□ 0.06
SNED1-201ENST00000310397 PTPRCP08575 1304 aa15.41■□□□□ 0.06
SNED1-201ENST00000310397 UBE2HP62256 183 aa15.41■□□□□ 0.06
SNED1-201ENST00000310397 FAM107BQ9H098 131 aa15.41■□□□□ 0.06
SNED1-201ENST00000310397 EIF2AK4Q9P2K8 1649 aaKnown RBP15.41■□□□□ 0.06
SNED1-201ENST00000310397 PODXL2Q9NZ53 605 aa15.41■□□□□ 0.06
SNED1-201ENST00000310397 CBX1P83916 185 aa15.41■□□□□ 0.06
SNED1-201ENST00000310397 ZFYVE27Q5T4F4 411 aa15.41■□□□□ 0.06
SNED1-201ENST00000310397 CLIP2Q9UDT6 1046 aa15.41■□□□□ 0.06
SNED1-201ENST00000310397 EXOC6BQ9Y2D4 811 aa15.41■□□□□ 0.06
SNED1-201ENST00000310397 MAPKBP1O60336 1514 aa15.41■□□□□ 0.06
SNED1-201ENST00000310397 FYB1O15117 783 aa15.4■□□□□ 0.06
SNED1-201ENST00000310397 TRIM27P14373 513 aa15.4■□□□□ 0.06
SNED1-201ENST00000310397 RALGAPBQ86X10 1494 aa15.4■□□□□ 0.06
SNED1-201ENST00000310397 TNNT1P13805 278 aa15.4■□□□□ 0.06
SNED1-201ENST00000310397 CFAP43Q8NDM7 1665 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms