RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 ARHGAP31Q2M1Z3 1444 aa6.33□□□□□ -1.4
CAST-201ENST00000309190 TRIM37O94972 964 aa6.33□□□□□ -1.4
CAST-201ENST00000309190 CABP4P57796 275 aa6.33□□□□□ -1.4
CAST-201ENST00000309190 IFNLR1Q8IU57 520 aaPredicted RBP6.33□□□□□ -1.4
CAST-201ENST00000309190 EXOC6Q8TAG9 804 aa6.33□□□□□ -1.4
CAST-201ENST00000309190 RCAN3Q9UKA8 241 aa6.33□□□□□ -1.4
CAST-201ENST00000309190 USP19O94966 1318 aa6.33□□□□□ -1.4
CAST-201ENST00000309190 GPTP24298 496 aa6.32□□□□□ -1.4
CAST-201ENST00000309190 WWC1Q8IX03 1113 aa6.32□□□□□ -1.4
CAST-201ENST00000309190 RUNDC1Q96C34 613 aa6.32□□□□□ -1.4
CAST-201ENST00000309190 COL3A1P02461 1466 aaPredicted RBP6.32□□□□□ -1.4
CAST-201ENST00000309190 EXOC5O00471 708 aa6.32□□□□□ -1.4
CAST-201ENST00000309190 TTC5Q8N0Z6 440 aa6.32□□□□□ -1.4
CAST-201ENST00000309190 ANKRD36BQ8N2N9 1353 aa6.32□□□□□ -1.4
CAST-201ENST00000309190 ZFYVE9O95405 1425 aa6.32□□□□□ -1.4
CAST-201ENST00000309190 ATP5J2-PTCD1G3V325 749 aa6.32□□□□□ -1.4
CAST-201ENST00000309190 IPO9Q96P70 1041 aaKnown RBP6.32□□□□□ -1.4
CAST-201ENST00000309190 BACH2Q9BYV9 841 aa6.32□□□□□ -1.4
CAST-201ENST00000309190 PLEKHG3A1L390 1219 aa6.31□□□□□ -1.4
CAST-201ENST00000309190 FKBP5Q13451 457 aaPredicted RBP6.31□□□□□ -1.4
CAST-201ENST00000309190 ZBTB3Q9H5J0 574 aa6.31□□□□□ -1.4
CAST-201ENST00000309190 CEP170BQ9Y4F5 1589 aaPredicted RBP6.31□□□□□ -1.4
CAST-201ENST00000309190 DDB1Q16531 1140 aa6.31□□□□□ -1.4
CAST-201ENST00000309190 TBC1D2BQ9UPU7 963 aa6.31□□□□□ -1.4
CAST-201ENST00000309190 BTBD11A6QL63 1104 aa6.31□□□□□ -1.4
CAST-201ENST00000309190 SLC4A2P04920 1241 aa6.31□□□□□ -1.4
CAST-201ENST00000309190 RRP1P56182 461 aaKnown RBP6.31□□□□□ -1.4
CAST-201ENST00000309190 C8orf58Q8NAV2 365 aa6.31□□□□□ -1.4
CAST-201ENST00000309190 PREX1Q8TCU6 1659 aa6.31□□□□□ -1.4
CAST-201ENST00000309190 SBNO2Q9Y2G9 1366 aa6.31□□□□□ -1.4
CAST-201ENST00000309190 KIF20BQ96Q89 1820 aa6.31□□□□□ -1.4
CAST-201ENST00000309190 GTF2E1P29083 439 aaPredicted RBP6.3□□□□□ -1.4
CAST-201ENST00000309190 VASPP50552 380 aaPredicted RBP6.3□□□□□ -1.4
CAST-201ENST00000309190 MSL1Q68DK7 614 aa6.3□□□□□ -1.4
CAST-201ENST00000309190 ASAP1Q9ULH1 1129 aa6.3□□□□□ -1.4
CAST-201ENST00000309190 NEXMIFQ5QGS0 1516 aa6.3□□□□□ -1.4
CAST-201ENST00000309190 AFF2P51816 1311 aa6.3□□□□□ -1.4
CAST-201ENST00000309190 KCNH5Q8NCM2 988 aa6.3□□□□□ -1.4
CAST-201ENST00000309190 C3P01024 1663 aa6.3□□□□□ -1.4
CAST-201ENST00000309190 DEFB132Q7Z7B7 95 aa6.3□□□□□ -1.4
CAST-201ENST00000309190 NOP58Q9Y2X3 529 aaKnown RBP6.3□□□□□ -1.4
CAST-201ENST00000309190 ECM2O94769 699 aaPredicted RBP6.3□□□□□ -1.4
CAST-201ENST00000309190 A1BGP04217 495 aa6.3□□□□□ -1.4
CAST-201ENST00000309190 ARHGEF25Q86VW2 580 aa6.3□□□□□ -1.4
CAST-201ENST00000309190 BBXQ8WY36 941 aaPredicted RBP6.3□□□□□ -1.4
CAST-201ENST00000309190 KNDC1Q76NI1 1749 aa6.29□□□□□ -1.4
CAST-201ENST00000309190 IL13P35225 146 aa6.29□□□□□ -1.4
CAST-201ENST00000309190 ZCRB1Q8TBF4 217 aaKnown RBP6.29□□□□□ -1.4
CAST-201ENST00000309190 MS4A1P11836 297 aa6.29□□□□□ -1.4
CAST-201ENST00000309190 CRBNQ96SW2 442 aa6.29□□□□□ -1.4
CAST-201ENST00000309190 SPATA31A3Q5VYP0 1347 aa6.29□□□□□ -1.4
CAST-201ENST00000309190 PLEKHO1Q53GL0 409 aaPredicted RBP6.29□□□□□ -1.4
CAST-201ENST00000309190 IL17REQ8NFR9 667 aa6.29□□□□□ -1.4
CAST-201ENST00000309190 IP6K1Q92551 441 aa6.29□□□□□ -1.4
CAST-201ENST00000309190 PSDA5PKW4 1024 aaPredicted RBP6.28□□□□□ -1.4
CAST-201ENST00000309190 DEKP35659 375 aaKnown RBP6.28□□□□□ -1.4
CAST-201ENST00000309190 HDGFL1Q5TGJ6 251 aa6.28□□□□□ -1.4
CAST-201ENST00000309190 BCL11BQ9C0K0 894 aaPredicted RBP6.28□□□□□ -1.4
CAST-201ENST00000309190 PHAXQ9H814 394 aaKnown RBP6.28□□□□□ -1.4
CAST-201ENST00000309190 AGLP35573 1532 aa6.28□□□□□ -1.4
CAST-201ENST00000309190 TWISTNBQ3B726 338 aaPredicted RBP6.28□□□□□ -1.4
CAST-201ENST00000309190 C8orf34Q49A92 452 aa6.28□□□□□ -1.4
CAST-201ENST00000309190 G2E3Q7L622 706 aa6.28□□□□□ -1.4
CAST-201ENST00000309190 MBIPQ9NS73 344 aa6.28□□□□□ -1.4
CAST-201ENST00000309190 C1orf167Q5SNV9 1468 aa6.28□□□□□ -1.4
CAST-201ENST00000309190 CPS1P31327 1500 aa6.28□□□□□ -1.4
CAST-201ENST00000309190 GNAT3A8MTJ3 354 aa6.28□□□□□ -1.4
CAST-201ENST00000309190 CHMP4CQ96CF2 233 aa6.28□□□□□ -1.4
CAST-201ENST00000309190 SIL1Q9H173 461 aa6.28□□□□□ -1.4
CAST-201ENST00000309190 USP16Q9Y5T5 823 aa6.28□□□□□ -1.4
CAST-201ENST00000309190 TULP4Q9NRJ4 1543 aa6.28□□□□□ -1.4
CAST-201ENST00000309190 TMEM131LA2VDJ0 1609 aa6.28□□□□□ -1.4
CAST-201ENST00000309190 STRCQ7RTU9 1775 aa6.27□□□□□ -1.4
CAST-201ENST00000309190 DLG5Q8TDM6 1919 aa6.27□□□□□ -1.41
CAST-201ENST00000309190 SEPT12Q8IYM1 358 aa6.27□□□□□ -1.41
CAST-201ENST00000309190 SSH1Q8WYL5 1049 aa6.27□□□□□ -1.41
CAST-201ENST00000309190 TMOD3Q9NYL9 352 aa6.27□□□□□ -1.41
CAST-201ENST00000309190 NOB1Q9ULX3 412 aaKnown RBP6.27□□□□□ -1.41
CAST-201ENST00000309190 CYP27B1O15528 508 aa6.27□□□□□ -1.41
CAST-201ENST00000309190 IL2RBP14784 551 aa6.27□□□□□ -1.41
CAST-201ENST00000309190 NFE2L2Q16236 605 aa6.27□□□□□ -1.41
CAST-201ENST00000309190 DUSP27Q5VZP5 1158 aa6.27□□□□□ -1.41
CAST-201ENST00000309190 STK31Q9BXU1 1019 aa6.27□□□□□ -1.41
CAST-201ENST00000309190 RSPH6AQ9H0K4 717 aa6.27□□□□□ -1.41
CAST-201ENST00000309190 USP6P35125 1406 aa6.27□□□□□ -1.41
CAST-201ENST00000309190 NCOA3Q9Y6Q9 1424 aa6.27□□□□□ -1.41
CAST-201ENST00000309190 NRKQ7Z2Y5 1582 aa6.27□□□□□ -1.41
CAST-201ENST00000309190 RGPD1P0DJD0 1748 aa6.27□□□□□ -1.41
CAST-201ENST00000309190 ZNF496Q96IT1 587 aaPredicted RBP6.27□□□□□ -1.41
CAST-201ENST00000309190 FCHSD2O94868 740 aa6.26□□□□□ -1.41
CAST-201ENST00000309190 OS9Q13438 667 aaPredicted RBP6.26□□□□□ -1.41
CAST-201ENST00000309190 PROSER3Q2NL68 480 aa6.26□□□□□ -1.41
CAST-201ENST00000309190 TRIM35Q9UPQ4 493 aa6.26□□□□□ -1.41
CAST-201ENST00000309190 MED14O60244 1454 aa6.26□□□□□ -1.41
CAST-201ENST00000309190 NALCNQ8IZF0 1738 aa6.26□□□□□ -1.41
CAST-201ENST00000309190 CHPF2Q9P2E5 772 aa6.26□□□□□ -1.41
CAST-201ENST00000309190 ERBB3P21860 1342 aa6.26□□□□□ -1.41
CAST-201ENST00000309190 MARF1Q9Y4F3 1742 aaKnown RBP6.26□□□□□ -1.41
CAST-201ENST00000309190 APBA3O96018 575 aa6.25□□□□□ -1.41
CAST-201ENST00000309190 ATP6V1AP38606 617 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms