RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 SMG6Q86US8 1419 aaKnown RBP27.39■■□□□ 1.97
PDZRN3-202ENST00000308537 KIF7Q2M1P5 1343 aa27.39■■□□□ 1.97
PDZRN3-202ENST00000308537 ANO8Q9HCE9 1232 aaPredicted RBP27.38■■□□□ 1.97
PDZRN3-202ENST00000308537 DOT1LQ8TEK3 1739 aa27.38■■□□□ 1.97
PDZRN3-202ENST00000308537 WASHC2AQ641Q2 1341 aa27.38■■□□□ 1.97
PDZRN3-202ENST00000308537 PAPPAQ13219 1627 aa27.35■■□□□ 1.97
PDZRN3-202ENST00000308537 PKD1L3Q7Z443 1732 aa27.35■■□□□ 1.97
PDZRN3-202ENST00000308537 TXNRD1Q16881 649 aa27.34■■□□□ 1.97
PDZRN3-202ENST00000308537 ZCRB1Q8TBF4 217 aaKnown RBP27.34■■□□□ 1.97
PDZRN3-202ENST00000308537 DDX54Q8TDD1 881 aaKnown RBP27.34■■□□□ 1.97
PDZRN3-202ENST00000308537 CASZ1Q86V15 1759 aa27.34■■□□□ 1.97
PDZRN3-202ENST00000308537 NSD2O96028 1365 aa27.34■■□□□ 1.97
PDZRN3-202ENST00000308537 NBPF14Q5TI25 921 aa27.31■■□□□ 1.96
PDZRN3-202ENST00000308537 TOGARAM1Q9Y4F4 1720 aa27.28■■□□□ 1.96
PDZRN3-202ENST00000308537 PPM1GO15355 546 aaPredicted RBP27.28■■□□□ 1.96
PDZRN3-202ENST00000308537 AMER1Q5JTC6 1135 aaPredicted RBP27.28■■□□□ 1.96
PDZRN3-202ENST00000308537 EYA1Q99502 592 aa27.28■■□□□ 1.96
PDZRN3-202ENST00000308537 TNNT2P45379 298 aaPredicted RBP27.27■■□□□ 1.96
PDZRN3-202ENST00000308537 RAPGEF4Q8WZA2 1011 aa27.27■■□□□ 1.96
PDZRN3-202ENST00000308537 LY75O60449 1722 aa27.27■■□□□ 1.96
PDZRN3-202ENST00000308537 PER1O15534 1290 aaPredicted RBP27.26■■□□□ 1.95
PDZRN3-202ENST00000308537 TATP17735 454 aaPredicted RBP27.25■■□□□ 1.95
PDZRN3-202ENST00000308537 EIF4A2Q14240 407 aaKnown RBP27.25■■□□□ 1.95
PDZRN3-202ENST00000308537 CYP27B1O15528 508 aa27.24■■□□□ 1.95
PDZRN3-202ENST00000308537 PRIM1P49642 420 aaKnown RBP27.24■■□□□ 1.95
PDZRN3-202ENST00000308537 PDGFDQ9GZP0 370 aaPredicted RBP27.24■■□□□ 1.95
PDZRN3-202ENST00000308537 LRRC4BQ9NT99 713 aa27.24■■□□□ 1.95
PDZRN3-202ENST00000308537 PCDH11XQ9BZA7 1347 aa27.21■■□□□ 1.95
PDZRN3-202ENST00000308537 PCDH11YQ9BZA8 1340 aa27.21■■□□□ 1.95
PDZRN3-202ENST00000308537 KNSTRNQ9Y448 316 aa27.21■■□□□ 1.95
PDZRN3-202ENST00000308537 ITGB4P16144 1822 aa27.2■■□□□ 1.95
PDZRN3-202ENST00000308537 SLC15A2Q16348 729 aa27.2■■□□□ 1.94
PDZRN3-202ENST00000308537 IGSF1Q8N6C5 1336 aa27.19■■□□□ 1.94
PDZRN3-202ENST00000308537 MORC1Q86VD1 984 aa27.18■■□□□ 1.94
PDZRN3-202ENST00000308537 ZNF827Q17R98 1081 aa27.16■■□□□ 1.94
PDZRN3-202ENST00000308537 TUBGCP6Q96RT7 1819 aa27.16■■□□□ 1.94
PDZRN3-202ENST00000308537 QSER1Q2KHR3 1735 aa27.16■■□□□ 1.94
PDZRN3-202ENST00000308537 PLEKHG2Q9H7P9 1386 aa27.15■■□□□ 1.94
PDZRN3-202ENST00000308537 NKX1-1Q15270 411 aaPredicted RBP27.15■■□□□ 1.94
PDZRN3-202ENST00000308537 SYTL4Q96C24 671 aaPredicted RBP27.15■■□□□ 1.94
PDZRN3-202ENST00000308537 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.15■■□□□ 1.94
PDZRN3-202ENST00000308537 STK32BQ9NY57 414 aa27.14■■□□□ 1.94
PDZRN3-202ENST00000308537 SLC27A3Q5K4L6 730 aa27.12■■□□□ 1.93
PDZRN3-202ENST00000308537 AKT1S1Q96B36 256 aa27.12■■□□□ 1.93
PDZRN3-202ENST00000308537 KCNQ4P56696 695 aa27.11■■□□□ 1.93
PDZRN3-202ENST00000308537 NPC1L1Q9UHC9 1359 aa27.1■■□□□ 1.93
PDZRN3-202ENST00000308537 SPON1Q9HCB6 807 aa27.1■■□□□ 1.93
PDZRN3-202ENST00000308537 TAF1LQ8IZX4 1826 aa27.09■■□□□ 1.93
PDZRN3-202ENST00000308537 IL13P35225 146 aa27.08■■□□□ 1.93
PDZRN3-202ENST00000308537 PTGER2P43116 358 aa27.08■■□□□ 1.93
PDZRN3-202ENST00000308537 SPG7Q9UQ90 795 aa27.08■■□□□ 1.93
PDZRN3-202ENST00000308537 KDRP35968 1356 aa27.08■■□□□ 1.93
PDZRN3-202ENST00000308537 PHKG2P15735 406 aa27.07■■□□□ 1.92
PDZRN3-202ENST00000308537 AEBP1Q8IUX7 1158 aa27.07■■□□□ 1.92
PDZRN3-202ENST00000308537 COL24A1Q17RW2 1714 aa27.07■■□□□ 1.92
PDZRN3-202ENST00000308537 ZBTB7AO95365 584 aa27.06■■□□□ 1.92
PDZRN3-202ENST00000308537 SGIP1Q9BQI5 828 aa27.06■■□□□ 1.92
PDZRN3-202ENST00000308537 C5P01031 1676 aa27.05■■□□□ 1.92
PDZRN3-202ENST00000308537 CC2D1BQ5T0F9 858 aaKnown RBP27.04■■□□□ 1.92
PDZRN3-202ENST00000308537 MPRIPQ6WCQ1 1025 aa27.04■■□□□ 1.92
PDZRN3-202ENST00000308537 MTHFSP49914 203 aa27.03■■□□□ 1.92
PDZRN3-202ENST00000308537 IFNL2Q8IZJ0 200 aa27.03■■□□□ 1.92
PDZRN3-202ENST00000308537 PALLDQ8WX93 1383 aa27.03■■□□□ 1.92
PDZRN3-202ENST00000308537 PIGBQ92521 554 aa27.03■■□□□ 1.92
PDZRN3-202ENST00000308537 COL3A1P02461 1466 aaPredicted RBP27.02■■□□□ 1.92
PDZRN3-202ENST00000308537 PNPLA7Q6ZV29 1317 aa27.02■■□□□ 1.92
PDZRN3-202ENST00000308537 CCNL1Q9UK58 526 aaPredicted RBP27.02■■□□□ 1.92
PDZRN3-202ENST00000308537 KDM6AO15550 1401 aaPredicted RBP27■■□□□ 1.91
PDZRN3-202ENST00000308537 MTFR1LQ9H019 292 aa26.99■■□□□ 1.91
PDZRN3-202ENST00000308537 ATF5Q9Y2D1 282 aaPredicted RBP26.99■■□□□ 1.91
PDZRN3-202ENST00000308537 SULT6B1Q6IMI4 303 aa26.97■■□□□ 1.91
PDZRN3-202ENST00000308537 C4BP0C0L5 1744 aa26.95■■□□□ 1.9
PDZRN3-202ENST00000308537 PLEKHO1Q53GL0 409 aaPredicted RBP26.94■■□□□ 1.9
PDZRN3-202ENST00000308537 UBR3Q6ZT12 1888 aa26.93■■□□□ 1.9
PDZRN3-202ENST00000308537 AMOTQ4VCS5 1084 aa26.93■■□□□ 1.9
PDZRN3-202ENST00000308537 SMARCC1Q92922 1105 aaPredicted RBP26.93■■□□□ 1.9
PDZRN3-202ENST00000308537 ASAP1Q9ULH1 1129 aa26.93■■□□□ 1.9
PDZRN3-202ENST00000308537 SCN11AQ9UI33 1791 aa26.92■■□□□ 1.9
PDZRN3-202ENST00000308537 TMOD3Q9NYL9 352 aa26.92■■□□□ 1.9
PDZRN3-202ENST00000308537 ZNF530Q6P9A1 599 aaPredicted RBP26.91■■□□□ 1.9
PDZRN3-202ENST00000308537 AMIGO3Q86WK7 504 aa26.91■■□□□ 1.9
PDZRN3-202ENST00000308537 DCAF5Q96JK2 942 aa26.91■■□□□ 1.9
PDZRN3-202ENST00000308537 TFCP2L1Q9NZI6 479 aa26.91■■□□□ 1.9
PDZRN3-202ENST00000308537 PPP1R1BQ9UD71 204 aaPredicted RBP26.91■■□□□ 1.9
PDZRN3-202ENST00000308537 ZNF831Q5JPB2 1677 aa26.9■■□□□ 1.9
PDZRN3-202ENST00000308537 ERVV-2B6SEH9 535 aa26.9■■□□□ 1.9
PDZRN3-202ENST00000308537 SLC16A10Q8TF71 515 aa26.9■■□□□ 1.9
PDZRN3-202ENST00000308537 ATG3Q9NT62 314 aa26.9■■□□□ 1.9
PDZRN3-202ENST00000308537 ADAMTS7Q9UKP4 1686 aa26.89■■□□□ 1.9
PDZRN3-202ENST00000308537 VIRMAQ69YN4 1812 aaKnown RBP26.89■■□□□ 1.9
PDZRN3-202ENST00000308537 COL23A1Q86Y22 540 aaPredicted RBP26.89■■□□□ 1.9
PDZRN3-202ENST00000308537 UTRNP46939 3433 aa26.88■■□□□ 1.89
PDZRN3-202ENST00000308537 LOC102724428A0A0B4J2F2 783 aa26.88■■□□□ 1.89
PDZRN3-202ENST00000308537 SIK1P57059 783 aa26.88■■□□□ 1.89
PDZRN3-202ENST00000308537 DIAPH1O60610 1272 aaKnown RBP26.87■■□□□ 1.89
PDZRN3-202ENST00000308537 HSP90AB1P08238 724 aaKnown RBP26.87■■□□□ 1.89
PDZRN3-202ENST00000308537 ITPK1Q13572 414 aa26.87■■□□□ 1.89
PDZRN3-202ENST00000308537 SLC4A9Q96Q91 983 aa26.87■■□□□ 1.89
PDZRN3-202ENST00000308537 HMOX1P09601 288 aa26.86■■□□□ 1.89
PDZRN3-202ENST00000308537 LINC00116Q8NCU8 138 aa26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms