RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 TBX22Q9Y458 520 aa13.77□□□□□ -0.21
PCDHGC3-201ENST00000308177 RALYLQ86SE5 291 aaKnown RBP13.76□□□□□ -0.21
PCDHGC3-201ENST00000308177 PHACTR3Q96KR7 559 aa13.76□□□□□ -0.21
PCDHGC3-201ENST00000308177 FAM177BA6PVY3 158 aa13.76□□□□□ -0.21
PCDHGC3-201ENST00000308177 DNAAF4Q8WXU2 420 aa13.76□□□□□ -0.21
PCDHGC3-201ENST00000308177 KIF1BPQ96EK5 621 aa13.76□□□□□ -0.21
PCDHGC3-201ENST00000308177 DBF4Q9UBU7 674 aaPredicted RBP13.76□□□□□ -0.21
PCDHGC3-201ENST00000308177 MEX3CQ5U5Q3 659 aaKnown RBP13.76□□□□□ -0.21
PCDHGC3-201ENST00000308177 C8orf58Q8NAV2 365 aa13.75□□□□□ -0.21
PCDHGC3-201ENST00000308177 MX1P20591 662 aa13.75□□□□□ -0.21
PCDHGC3-201ENST00000308177 HDAC1Q13547 482 aaPredicted RBP13.75□□□□□ -0.21
PCDHGC3-201ENST00000308177 LARP1Q6PKG0 1096 aaKnown RBP13.75□□□□□ -0.21
PCDHGC3-201ENST00000308177 NUTM1Q86Y26 1132 aa13.75□□□□□ -0.21
PCDHGC3-201ENST00000308177 LRRFIP2Q9Y608 721 aaKnown RBP13.75□□□□□ -0.21
PCDHGC3-201ENST00000308177 YEATS2Q9ULM3 1422 aa13.75□□□□□ -0.21
PCDHGC3-201ENST00000308177 KCNA6P17658 529 aa13.74□□□□□ -0.21
PCDHGC3-201ENST00000308177 CADPS2Q86UW7 1296 aa13.74□□□□□ -0.21
PCDHGC3-201ENST00000308177 TNNQ9UQP3 1299 aa13.74□□□□□ -0.21
PCDHGC3-201ENST00000308177 PTCD1O75127 700 aaKnown RBP13.74□□□□□ -0.21
PCDHGC3-201ENST00000308177 RAB11FIP3O75154 756 aa13.74□□□□□ -0.21
PCDHGC3-201ENST00000308177 RLBP1P12271 317 aa13.74□□□□□ -0.21
PCDHGC3-201ENST00000308177 ANKRD24Q8TF21 1146 aa13.74□□□□□ -0.21
PCDHGC3-201ENST00000308177 SBNO2Q9Y2G9 1366 aa13.74□□□□□ -0.21
PCDHGC3-201ENST00000308177 TRIM29Q14134 588 aa13.73□□□□□ -0.21
PCDHGC3-201ENST00000308177 RASSF8Q8NHQ8 419 aa13.73□□□□□ -0.21
PCDHGC3-201ENST00000308177 BICD2Q8TD16 824 aa13.73□□□□□ -0.21
PCDHGC3-201ENST00000308177 INSRP06213 1382 aa13.73□□□□□ -0.21
PCDHGC3-201ENST00000308177 FLT4P35916 1363 aa13.73□□□□□ -0.21
PCDHGC3-201ENST00000308177 ERCC6L2Q5T890 1561 aa13.73□□□□□ -0.21
PCDHGC3-201ENST00000308177 RSPH6AQ9H0K4 717 aa13.73□□□□□ -0.21
PCDHGC3-201ENST00000308177 CWC22Q9HCG8 908 aaKnown RBP13.73□□□□□ -0.21
PCDHGC3-201ENST00000308177 MRPL50Q8N5N7 158 aaKnown RBP13.73□□□□□ -0.21
PCDHGC3-201ENST00000308177 ZCCHC11Q5TAX3 1644 aaKnown RBP13.73□□□□□ -0.21
PCDHGC3-201ENST00000308177 VAMP4O75379 141 aa13.73□□□□□ -0.21
PCDHGC3-201ENST00000308177 CCDC158Q5M9N0 1113 aa13.73□□□□□ -0.21
PCDHGC3-201ENST00000308177 NFXL1Q6ZNB6 911 aa13.73□□□□□ -0.21
PCDHGC3-201ENST00000308177 CNNM1Q9NRU3 951 aa13.73□□□□□ -0.21
PCDHGC3-201ENST00000308177 KDM5DQ9BY66 1539 aa13.73□□□□□ -0.21
PCDHGC3-201ENST00000308177 CCDC57Q2TAC2 916 aa13.72□□□□□ -0.21
PCDHGC3-201ENST00000308177 NOL10Q9BSC4 688 aaKnown RBP13.72□□□□□ -0.21
PCDHGC3-201ENST00000308177 TBC1D2BQ9UPU7 963 aa13.72□□□□□ -0.21
PCDHGC3-201ENST00000308177 BMP2KLQ5H9B9 411 aa13.72□□□□□ -0.21
PCDHGC3-201ENST00000308177 CWC27Q6UX04 472 aaKnown RBP13.72□□□□□ -0.21
PCDHGC3-201ENST00000308177 CYP46A1Q9Y6A2 500 aa13.72□□□□□ -0.21
PCDHGC3-201ENST00000308177 KDM5CP41229 1560 aa13.72□□□□□ -0.21
PCDHGC3-201ENST00000308177 PLA2R1Q13018 1463 aa13.72□□□□□ -0.21
PCDHGC3-201ENST00000308177 HYPKQ9NX55 129 aa13.72□□□□□ -0.21
PCDHGC3-201ENST00000308177 NUTM2BA6NNL0 878 aaPredicted RBP13.72□□□□□ -0.21
PCDHGC3-201ENST00000308177 NUTM2EB1AL46 878 aaPredicted RBP13.72□□□□□ -0.21
PCDHGC3-201ENST00000308177 NUTM2AQ8IVF1 878 aaPredicted RBP13.72□□□□□ -0.21
PCDHGC3-201ENST00000308177 TSPYL6Q8N831 410 aa13.72□□□□□ -0.21
PCDHGC3-201ENST00000308177 BECN2A8MW95 431 aa13.71□□□□□ -0.21
PCDHGC3-201ENST00000308177 MTHFSDQ2M296 383 aaKnown RBP13.71□□□□□ -0.21
PCDHGC3-201ENST00000308177 CIZ1Q9ULV3 898 aaPredicted RBP13.71□□□□□ -0.21
PCDHGC3-201ENST00000308177 GLRX3O76003 335 aaKnown RBP13.71□□□□□ -0.21
PCDHGC3-201ENST00000308177 MLH3Q9UHC1 1453 aa13.71□□□□□ -0.21
PCDHGC3-201ENST00000308177 TRPM2O94759 1503 aa13.71□□□□□ -0.21
PCDHGC3-201ENST00000308177 GOLGA6L19H0YKK7 550 aa13.71□□□□□ -0.22
PCDHGC3-201ENST00000308177 AMOTL1Q8IY63 956 aa13.71□□□□□ -0.22
PCDHGC3-201ENST00000308177 CEP126Q9P2H0 1117 aa13.71□□□□□ -0.22
PCDHGC3-201ENST00000308177 MAP3K19Q56UN5 1328 aa13.7□□□□□ -0.22
PCDHGC3-201ENST00000308177 CDC42BPAQ5VT25 1732 aa13.7□□□□□ -0.22
PCDHGC3-201ENST00000308177 ERICH2A1L162 156 aa13.7□□□□□ -0.22
PCDHGC3-201ENST00000308177 PDCP20941 246 aa13.7□□□□□ -0.22
PCDHGC3-201ENST00000308177 IFNL2Q8IZJ0 200 aa13.7□□□□□ -0.22
PCDHGC3-201ENST00000308177 BLMP54132 1417 aaPredicted RBP13.7□□□□□ -0.22
PCDHGC3-201ENST00000308177 EDC4Q6P2E9 1401 aaKnown RBP13.7□□□□□ -0.22
PCDHGC3-201ENST00000308177 PI4KAP2A4QPH2 592 aa13.7□□□□□ -0.22
PCDHGC3-201ENST00000308177 MRE11P49959 708 aa13.7□□□□□ -0.22
PCDHGC3-201ENST00000308177 FOSBP53539 338 aa13.7□□□□□ -0.22
PCDHGC3-201ENST00000308177 TTC39AQ5SRH9 613 aa13.7□□□□□ -0.22
PCDHGC3-201ENST00000308177 PI4KAP1Q8N8J0 262 aa13.7□□□□□ -0.22
PCDHGC3-201ENST00000308177 MYD88Q99836 296 aa13.7□□□□□ -0.22
PCDHGC3-201ENST00000308177 DMRT2Q9Y5R5 561 aa13.7□□□□□ -0.22
PCDHGC3-201ENST00000308177 PIK3R4Q99570 1358 aa13.7□□□□□ -0.22
PCDHGC3-201ENST00000308177 ZMYM4Q5VZL5 1548 aa13.7□□□□□ -0.22
PCDHGC3-201ENST00000308177 MEIS3Q99687 375 aa13.7□□□□□ -0.22
PCDHGC3-201ENST00000308177 PRPF40AO75400 957 aaKnown RBP13.69□□□□□ -0.22
PCDHGC3-201ENST00000308177 NUCB1Q02818 461 aa13.69□□□□□ -0.22
PCDHGC3-201ENST00000308177 EYA1Q99502 592 aa13.69□□□□□ -0.22
PCDHGC3-201ENST00000308177 RNF123Q5XPI4 1314 aa13.69□□□□□ -0.22
PCDHGC3-201ENST00000308177 MAGI2Q86UL8 1455 aa13.69□□□□□ -0.22
PCDHGC3-201ENST00000308177 CFAP74Q9C0B2 1584 aa13.69□□□□□ -0.22
PCDHGC3-201ENST00000308177 MBD3O95983 291 aa13.69□□□□□ -0.22
PCDHGC3-201ENST00000308177 STARD3NLO95772 234 aa13.69□□□□□ -0.22
PCDHGC3-201ENST00000308177 FMNL2Q96PY5 1086 aa13.69□□□□□ -0.22
PCDHGC3-201ENST00000308177 ADCY10Q96PN6 1610 aa13.69□□□□□ -0.22
PCDHGC3-201ENST00000308177 ZFYVE16Q7Z3T8 1539 aa13.69□□□□□ -0.22
PCDHGC3-201ENST00000308177 IL13P35225 146 aa13.69□□□□□ -0.22
PCDHGC3-201ENST00000308177 CHRNA2Q15822 529 aa13.69□□□□□ -0.22
PCDHGC3-201ENST00000308177 CAVIN1Q6NZI2 390 aaKnown RBP13.69□□□□□ -0.22
PCDHGC3-201ENST00000308177 TMOD3Q9NYL9 352 aa13.68□□□□□ -0.22
PCDHGC3-201ENST00000308177 UGGT1Q9NYU2 1555 aa13.68□□□□□ -0.22
PCDHGC3-201ENST00000308177 ANXA1P04083 346 aa13.68□□□□□ -0.22
PCDHGC3-201ENST00000308177 MCM4P33991 863 aa13.68□□□□□ -0.22
PCDHGC3-201ENST00000308177 TBC1D2Q9BYX2 928 aa13.68□□□□□ -0.22
PCDHGC3-201ENST00000308177 TBC1D9Q6ZT07 1266 aa13.68□□□□□ -0.22
PCDHGC3-201ENST00000308177 KRT24Q2M2I5 525 aa13.67□□□□□ -0.22
PCDHGC3-201ENST00000308177 MAP3K2Q9Y2U5 619 aa13.67□□□□□ -0.22
PCDHGC3-201ENST00000308177 TMEM2Q9UHN6 1383 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms