RNA–Protein interactions for RNA: ENST00000307548.2

SHANK2-AS3-201, SHANK2 antisense RNA 3, humanhuman

TSL 1 (best) BASIC

Gene SHANK2-AS3, Length 1,683 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3-201ENST00000307548 FNBP4Q8N3X1 1017 aaPredicted RBP16.78■□□□□ 0.28
SHANK2-AS3-201ENST00000307548 NLRP2Q9NX02 1062 aa16.78■□□□□ 0.28
SHANK2-AS3-201ENST00000307548 CARD10Q9BWT7 1032 aa16.77■□□□□ 0.28
SHANK2-AS3-201ENST00000307548 STRN4Q9NRL3 753 aa16.77■□□□□ 0.28
SHANK2-AS3-201ENST00000307548 CRB1P82279 1406 aa16.77■□□□□ 0.27
SHANK2-AS3-201ENST00000307548 BCL9LQ86UU0 1499 aa16.77■□□□□ 0.27
SHANK2-AS3-201ENST00000307548 SPINK5Q9NQ38 1064 aaPredicted RBP16.76■□□□□ 0.27
SHANK2-AS3-201ENST00000307548 EVA1CP58658 441 aa16.75■□□□□ 0.27
SHANK2-AS3-201ENST00000307548 C8orf37Q96NL8 207 aa16.75■□□□□ 0.27
SHANK2-AS3-201ENST00000307548 LMOD3Q0VAK6 560 aa16.75■□□□□ 0.27
SHANK2-AS3-201ENST00000307548 PPP4R3CPQ6ZMV5 832 aa16.75■□□□□ 0.27
SHANK2-AS3-201ENST00000307548 TOM1L2Q6ZVM7 507 aa16.75■□□□□ 0.27
SHANK2-AS3-201ENST00000307548 RCAN3Q9UKA8 241 aa16.75■□□□□ 0.27
SHANK2-AS3-201ENST00000307548 PLEKHG2Q9H7P9 1386 aa16.74■□□□□ 0.27
SHANK2-AS3-201ENST00000307548 NEFLP07196 543 aa16.74■□□□□ 0.27
SHANK2-AS3-201ENST00000307548 NGLY1Q96IV0 654 aa16.74■□□□□ 0.27
SHANK2-AS3-201ENST00000307548 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.74■□□□□ 0.27
SHANK2-AS3-201ENST00000307548 MEGF6O75095 1541 aa16.74■□□□□ 0.27
SHANK2-AS3-201ENST00000307548 CALD1Q05682 793 aaKnown RBP16.72■□□□□ 0.27
SHANK2-AS3-201ENST00000307548 UNC5CLQ8IV45 518 aa16.72■□□□□ 0.27
SHANK2-AS3-201ENST00000307548 MYH16Q9H6N6 1097 aa16.72■□□□□ 0.27
SHANK2-AS3-201ENST00000307548 ERICH6BQ5W0A0 696 aa16.72■□□□□ 0.27
SHANK2-AS3-201ENST00000307548 POTEAQ6S8J7 498 aa16.72■□□□□ 0.27
SHANK2-AS3-201ENST00000307548 DISP2A7MBM2 1401 aa16.71■□□□□ 0.27
SHANK2-AS3-201ENST00000307548 MTHFSDQ2M296 383 aaKnown RBP16.71■□□□□ 0.27
SHANK2-AS3-201ENST00000307548 SPATA31A5Q5VU36 1347 aa16.71■□□□□ 0.27
SHANK2-AS3-201ENST00000307548 SPATA31A7Q8IWB4 1347 aa16.71■□□□□ 0.27
SHANK2-AS3-201ENST00000307548 OVOS2A0A0G2JMS6 1433 aa16.71■□□□□ 0.27
SHANK2-AS3-201ENST00000307548 MEX3CQ5U5Q3 659 aaKnown RBP16.7■□□□□ 0.26
SHANK2-AS3-201ENST00000307548 SPATA31A1Q5TZJ5 1347 aa16.7■□□□□ 0.26
SHANK2-AS3-201ENST00000307548 HTATSF1O43719 755 aaKnown RBP16.69■□□□□ 0.26
SHANK2-AS3-201ENST00000307548 AFF2P51816 1311 aa16.69■□□□□ 0.26
SHANK2-AS3-201ENST00000307548 VPS72Q15906 364 aa16.69■□□□□ 0.26
SHANK2-AS3-201ENST00000307548 PKD1L3Q7Z443 1732 aa16.69■□□□□ 0.26
SHANK2-AS3-201ENST00000307548 GAS2L2Q8NHY3 880 aa16.69■□□□□ 0.26
SHANK2-AS3-201ENST00000307548 RAPGEF4Q8WZA2 1011 aa16.69■□□□□ 0.26
SHANK2-AS3-201ENST00000307548 PARP4Q9UKK3 1724 aaKnown RBP16.69■□□□□ 0.26
SHANK2-AS3-201ENST00000307548 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.69■□□□□ 0.26
SHANK2-AS3-201ENST00000307548 USP21Q9UK80 565 aa16.69■□□□□ 0.26
SHANK2-AS3-201ENST00000307548 DLG5Q8TDM6 1919 aa16.68■□□□□ 0.26
SHANK2-AS3-201ENST00000307548 WNK3Q9BYP7 1800 aa16.68■□□□□ 0.26
SHANK2-AS3-201ENST00000307548 CT47B1P0C2W7 299 aaPredicted RBP16.68■□□□□ 0.26
SHANK2-AS3-201ENST00000307548 TATP17735 454 aaPredicted RBP16.68■□□□□ 0.26
SHANK2-AS3-201ENST00000307548 FKBP8Q14318 412 aa16.68■□□□□ 0.26
SHANK2-AS3-201ENST00000307548 ZNF853P0CG23 659 aa16.67■□□□□ 0.26
SHANK2-AS3-201ENST00000307548 AMOTQ4VCS5 1084 aa16.67■□□□□ 0.26
SHANK2-AS3-201ENST00000307548 PLEKHO1Q53GL0 409 aaPredicted RBP16.67■□□□□ 0.26
SHANK2-AS3-201ENST00000307548 IL2RBP14784 551 aa16.66■□□□□ 0.26
SHANK2-AS3-201ENST00000307548 IFT57Q9NWB7 429 aa16.66■□□□□ 0.26
SHANK2-AS3-201ENST00000307548 THRAP3Q9Y2W1 955 aaKnown RBP16.66■□□□□ 0.26
SHANK2-AS3-201ENST00000307548 ATRNO75882 1429 aa16.66■□□□□ 0.26
SHANK2-AS3-201ENST00000307548 USP35Q9P2H5 1018 aa16.65■□□□□ 0.26
SHANK2-AS3-201ENST00000307548 RRP1P56182 461 aaKnown RBP16.65■□□□□ 0.26
SHANK2-AS3-201ENST00000307548 GNAI1P63096 354 aa16.65■□□□□ 0.26
SHANK2-AS3-201ENST00000307548 BARGINQ6ZT62 677 aa16.65■□□□□ 0.26
SHANK2-AS3-201ENST00000307548 SHANK3Q9BYB0 1731 aa16.64■□□□□ 0.25
SHANK2-AS3-201ENST00000307548 FANCIQ9NVI1 1328 aa16.64■□□□□ 0.25
SHANK2-AS3-201ENST00000307548 CFAP44Q96MT7 982 aa16.64■□□□□ 0.25
SHANK2-AS3-201ENST00000307548 GLI3P10071 1580 aa16.64■□□□□ 0.25
SHANK2-AS3-201ENST00000307548 MAP3K5Q99683 1374 aa16.64■□□□□ 0.25
SHANK2-AS3-201ENST00000307548 ZNF530Q6P9A1 599 aaPredicted RBP16.63■□□□□ 0.25
SHANK2-AS3-201ENST00000307548 SPG7Q9UQ90 795 aa16.63■□□□□ 0.25
SHANK2-AS3-201ENST00000307548 ADAMTS7Q9UKP4 1686 aa16.63■□□□□ 0.25
SHANK2-AS3-201ENST00000307548 GNAT3A8MTJ3 354 aa16.62■□□□□ 0.25
SHANK2-AS3-201ENST00000307548 CYP27B1O15528 508 aa16.62■□□□□ 0.25
SHANK2-AS3-201ENST00000307548 AKAP4Q5JQC9 854 aa16.62■□□□□ 0.25
SHANK2-AS3-201ENST00000307548 CDCA7Q9BWT1 371 aaPredicted RBP16.62■□□□□ 0.25
SHANK2-AS3-201ENST00000307548 LRRC37A3O60309 1634 aa16.62■□□□□ 0.25
SHANK2-AS3-201ENST00000307548 ZCRB1Q8TBF4 217 aaKnown RBP16.61■□□□□ 0.25
SHANK2-AS3-201ENST00000307548 RTF1Q92541 710 aaKnown RBP16.61■□□□□ 0.25
SHANK2-AS3-201ENST00000307548 TRPC5Q9UL62 973 aaPredicted RBP16.61■□□□□ 0.25
SHANK2-AS3-201ENST00000307548 CCDC9Q9Y3X0 531 aaKnown RBP16.61■□□□□ 0.25
SHANK2-AS3-201ENST00000307548 PHKG2P15735 406 aa16.6■□□□□ 0.25
SHANK2-AS3-201ENST00000307548 DCTN1Q14203 1278 aa16.6■□□□□ 0.25
SHANK2-AS3-201ENST00000307548 IL17REQ8NFR9 667 aa16.6■□□□□ 0.25
SHANK2-AS3-201ENST00000307548 GJD4Q96KN9 370 aaPredicted RBP16.6■□□□□ 0.25
SHANK2-AS3-201ENST00000307548 THUMPD2Q9BTF0 503 aaKnown RBP16.6■□□□□ 0.25
SHANK2-AS3-201ENST00000307548 THSD7AQ9UPZ6 1657 aa16.6■□□□□ 0.25
SHANK2-AS3-201ENST00000307548 TNS2Q63HR2 1409 aa16.6■□□□□ 0.25
SHANK2-AS3-201ENST00000307548 CEMIPQ8WUJ3 1361 aa16.59■□□□□ 0.25
SHANK2-AS3-201ENST00000307548 CHL1O00533 1208 aa16.59■□□□□ 0.25
SHANK2-AS3-201ENST00000307548 TSR2Q969E8 191 aaKnown RBP16.59■□□□□ 0.25
SHANK2-AS3-201ENST00000307548 ZNF428Q96B54 188 aa16.59■□□□□ 0.25
SHANK2-AS3-201ENST00000307548 PCDH11XQ9BZA7 1347 aa16.59■□□□□ 0.25
SHANK2-AS3-201ENST00000307548 PCDH11YQ9BZA8 1340 aa16.59■□□□□ 0.25
SHANK2-AS3-201ENST00000307548 RARSP54136 660 aaKnown RBP16.59■□□□□ 0.25
SHANK2-AS3-201ENST00000307548 EXOSC9Q06265 439 aaKnown RBP16.59■□□□□ 0.25
SHANK2-AS3-201ENST00000307548 MCM10Q7L590 875 aa16.59■□□□□ 0.25
SHANK2-AS3-201ENST00000307548 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.59■□□□□ 0.25
SHANK2-AS3-201ENST00000307548 BABAM1Q9NWV8 329 aa16.59■□□□□ 0.25
SHANK2-AS3-201ENST00000307548 C1orf141Q5JVX7 400 aa16.58■□□□□ 0.24
SHANK2-AS3-201ENST00000307548 IFNL2Q8IZJ0 200 aa16.58■□□□□ 0.24
SHANK2-AS3-201ENST00000307548 KDM6AO15550 1401 aaPredicted RBP16.58■□□□□ 0.24
SHANK2-AS3-201ENST00000307548 ONECUT3O60422 494 aaPredicted RBP16.57■□□□□ 0.24
SHANK2-AS3-201ENST00000307548 NKX1-1Q15270 411 aaPredicted RBP16.57■□□□□ 0.24
SHANK2-AS3-201ENST00000307548 FAM98CQ17RN3 349 aaKnown RBP16.57■□□□□ 0.24
SHANK2-AS3-201ENST00000307548 QTRT2Q9H974 415 aaKnown RBP16.57■□□□□ 0.24
SHANK2-AS3-201ENST00000307548 MBIPQ9NS73 344 aa16.57■□□□□ 0.24
SHANK2-AS3-201ENST00000307548 LGR6Q9HBX8 967 aa16.56■□□□□ 0.24
SHANK2-AS3-201ENST00000307548 ZNF772Q68DY9 489 aaPredicted RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms