RNA–Protein interactions for RNA: ENST00000307301.11

MRPL39-201, Transcript of mitochondrial ribosomal protein L39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MRPL39, Length 1,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL39-201ENST00000307301 RAPGEF4Q8WZA2 1011 aa28.43■■■□□ 2.14
MRPL39-201ENST00000307301 ZCRB1Q8TBF4 217 aaKnown RBP28.42■■■□□ 2.14
MRPL39-201ENST00000307301 ACSBG1Q96GR2 724 aa28.42■■■□□ 2.14
MRPL39-201ENST00000307301 NCAPD2Q15021 1401 aa28.42■■■□□ 2.14
MRPL39-201ENST00000307301 KAT6BQ8WYB5 2073 aa28.41■■■□□ 2.14
MRPL39-201ENST00000307301 KCNQ2O43526 872 aa28.4■■■□□ 2.14
MRPL39-201ENST00000307301 TATP17735 454 aaPredicted RBP28.4■■■□□ 2.14
MRPL39-201ENST00000307301 EIF4A2Q14240 407 aaKnown RBP28.4■■■□□ 2.14
MRPL39-201ENST00000307301 DOT1LQ8TEK3 1739 aa28.4■■■□□ 2.14
MRPL39-201ENST00000307301 BTAF1O14981 1849 aa28.39■■■□□ 2.14
MRPL39-201ENST00000307301 EYA1Q99502 592 aa28.39■■■□□ 2.14
MRPL39-201ENST00000307301 PKD1L3Q7Z443 1732 aa28.38■■■□□ 2.13
MRPL39-201ENST00000307301 CC2D1BQ5T0F9 858 aaKnown RBP28.38■■■□□ 2.13
MRPL39-201ENST00000307301 PLSCR1O15162 318 aa28.37■■■□□ 2.13
MRPL39-201ENST00000307301 PSDA5PKW4 1024 aaPredicted RBP28.34■■■□□ 2.13
MRPL39-201ENST00000307301 NPC1L1Q9UHC9 1359 aa28.33■■■□□ 2.13
MRPL39-201ENST00000307301 CNGB1Q14028 1251 aaPredicted RBP28.32■■■□□ 2.12
MRPL39-201ENST00000307301 IGSF1Q8N6C5 1336 aa28.3■■■□□ 2.12
MRPL39-201ENST00000307301 PCDH11XQ9BZA7 1347 aa28.3■■■□□ 2.12
MRPL39-201ENST00000307301 PCDH11YQ9BZA8 1340 aa28.3■■■□□ 2.12
MRPL39-201ENST00000307301 R3HDM1Q15032 1099 aaKnown RBP28.29■■■□□ 2.12
MRPL39-201ENST00000307301 PROM2Q8N271 834 aa28.28■■■□□ 2.12
MRPL39-201ENST00000307301 MTHFSP49914 203 aa28.27■■■□□ 2.12
MRPL39-201ENST00000307301 CYP27B1O15528 508 aa28.26■■■□□ 2.11
MRPL39-201ENST00000307301 PRIM1P49642 420 aaKnown RBP28.26■■■□□ 2.11
MRPL39-201ENST00000307301 SYTL4Q96C24 671 aaPredicted RBP28.26■■■□□ 2.11
MRPL39-201ENST00000307301 TOGARAM1Q9Y4F4 1720 aa28.26■■■□□ 2.11
MRPL39-201ENST00000307301 TXNRD1Q16881 649 aa28.25■■■□□ 2.11
MRPL39-201ENST00000307301 NBPF14Q5TI25 921 aa28.25■■■□□ 2.11
MRPL39-201ENST00000307301 SPG7Q9UQ90 795 aa28.24■■■□□ 2.11
MRPL39-201ENST00000307301 ITGB4P16144 1822 aa28.22■■■□□ 2.11
MRPL39-201ENST00000307301 IL13P35225 146 aa28.22■■■□□ 2.11
MRPL39-201ENST00000307301 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.21■■■□□ 2.11
MRPL39-201ENST00000307301 AEBP1Q8IUX7 1158 aa28.2■■■□□ 2.1
MRPL39-201ENST00000307301 LY75O60449 1722 aa28.19■■■□□ 2.1
MRPL39-201ENST00000307301 ANO8Q9HCE9 1232 aaPredicted RBP28.19■■■□□ 2.1
MRPL39-201ENST00000307301 PLEKHG2Q9H7P9 1386 aa28.19■■■□□ 2.1
MRPL39-201ENST00000307301 LRP5O75197 1615 aa28.18■■■□□ 2.1
MRPL39-201ENST00000307301 PAPPAQ13219 1627 aa28.17■■■□□ 2.1
MRPL39-201ENST00000307301 NKX1-1Q15270 411 aaPredicted RBP28.16■■■□□ 2.1
MRPL39-201ENST00000307301 SULT6B1Q6IMI4 303 aa28.16■■■□□ 2.1
MRPL39-201ENST00000307301 COL3A1P02461 1466 aaPredicted RBP28.15■■■□□ 2.1
MRPL39-201ENST00000307301 KDRP35968 1356 aa28.15■■■□□ 2.1
MRPL39-201ENST00000307301 PHKG2P15735 406 aa28.15■■■□□ 2.1
MRPL39-201ENST00000307301 IFNL2Q8IZJ0 200 aa28.14■■■□□ 2.1
MRPL39-201ENST00000307301 DIAPH1O60610 1272 aaKnown RBP28.13■■■□□ 2.09
MRPL39-201ENST00000307301 PLEKHO1Q53GL0 409 aaPredicted RBP28.12■■■□□ 2.09
MRPL39-201ENST00000307301 LRRC4BQ9NT99 713 aa28.12■■■□□ 2.09
MRPL39-201ENST00000307301 MPRIPQ6WCQ1 1025 aa28.11■■■□□ 2.09
MRPL39-201ENST00000307301 CASZ1Q86V15 1759 aa28.11■■■□□ 2.09
MRPL39-201ENST00000307301 STK32BQ9NY57 414 aa28.1■■■□□ 2.09
MRPL39-201ENST00000307301 AMOTQ4VCS5 1084 aa28.09■■■□□ 2.09
MRPL39-201ENST00000307301 HMOX1P09601 288 aa28.08■■■□□ 2.09
MRPL39-201ENST00000307301 SLC27A3Q5K4L6 730 aa28.08■■■□□ 2.09
MRPL39-201ENST00000307301 ZNF530Q6P9A1 599 aaPredicted RBP28.08■■■□□ 2.09
MRPL39-201ENST00000307301 PPP2R1AP30153 589 aa28.07■■■□□ 2.08
MRPL39-201ENST00000307301 KCNQ4P56696 695 aa28.07■■■□□ 2.08
MRPL39-201ENST00000307301 SLC15A2Q16348 729 aa28.07■■■□□ 2.08
MRPL39-201ENST00000307301 ZEB1P37275 1124 aaPredicted RBP28.06■■■□□ 2.08
MRPL39-201ENST00000307301 SRCAPQ6ZRS2 3230 aa28.06■■■□□ 2.08
MRPL39-201ENST00000307301 PIGBQ92521 554 aa28.05■■■□□ 2.08
MRPL39-201ENST00000307301 PALLDQ8WX93 1383 aa28.03■■■□□ 2.08
MRPL39-201ENST00000307301 ZNF827Q17R98 1081 aa28.03■■■□□ 2.08
MRPL39-201ENST00000307301 CFAP53Q96M91 514 aa28.03■■■□□ 2.08
MRPL39-201ENST00000307301 PDGFDQ9GZP0 370 aaPredicted RBP28.03■■■□□ 2.08
MRPL39-201ENST00000307301 TMOD3Q9NYL9 352 aa28.03■■■□□ 2.08
MRPL39-201ENST00000307301 CCNL1Q9UK58 526 aaPredicted RBP28.03■■■□□ 2.08
MRPL39-201ENST00000307301 TUBGCP6Q96RT7 1819 aa28.03■■■□□ 2.08
MRPL39-201ENST00000307301 C5P01031 1676 aa28.03■■■□□ 2.08
MRPL39-201ENST00000307301 KDM6AO15550 1401 aaPredicted RBP28.02■■■□□ 2.08
MRPL39-201ENST00000307301 TAF1LQ8IZX4 1826 aa28.02■■■□□ 2.08
MRPL39-201ENST00000307301 U2SURPO15042 1029 aaKnown RBP28.02■■■□□ 2.08
MRPL39-201ENST00000307301 HSP90AB1P08238 724 aaKnown RBP28.02■■■□□ 2.08
MRPL39-201ENST00000307301 VIRMAQ69YN4 1812 aaKnown RBP28.02■■■□□ 2.08
MRPL39-201ENST00000307301 SCN11AQ9UI33 1791 aa28.01■■■□□ 2.08
MRPL39-201ENST00000307301 QSER1Q2KHR3 1735 aa28.01■■■□□ 2.07
MRPL39-201ENST00000307301 DDX10Q13206 875 aaKnown RBP28.01■■■□□ 2.07
MRPL39-201ENST00000307301 C1orf141Q5JVX7 400 aa28.01■■■□□ 2.07
MRPL39-201ENST00000307301 DCAF5Q96JK2 942 aa28.01■■■□□ 2.07
MRPL39-201ENST00000307301 SMARCC1Q92922 1105 aaPredicted RBP27.99■■■□□ 2.07
MRPL39-201ENST00000307301 AKT1S1Q96B36 256 aa27.99■■■□□ 2.07
MRPL39-201ENST00000307301 ERVV-2B6SEH9 535 aa27.97■■■□□ 2.07
MRPL39-201ENST00000307301 ASAP1Q9ULH1 1129 aa27.96■■■□□ 2.07
MRPL39-201ENST00000307301 AKAP4Q5JQC9 854 aa27.94■■■□□ 2.06
MRPL39-201ENST00000307301 SPON1Q9HCB6 807 aa27.94■■■□□ 2.06
MRPL39-201ENST00000307301 ZBTB7AO95365 584 aa27.93■■■□□ 2.06
MRPL39-201ENST00000307301 CABP4P57796 275 aa27.93■■■□□ 2.06
MRPL39-201ENST00000307301 MTHFSDQ2M296 383 aaKnown RBP27.93■■■□□ 2.06
MRPL39-201ENST00000307301 ATG3Q9NT62 314 aa27.93■■■□□ 2.06
MRPL39-201ENST00000307301 NUDCQ9Y266 331 aa27.92■■■□□ 2.06
MRPL39-201ENST00000307301 C4BP0C0L5 1744 aa27.92■■■□□ 2.06
MRPL39-201ENST00000307301 TFCP2L1Q9NZI6 479 aa27.91■■■□□ 2.06
MRPL39-201ENST00000307301 ADAMTS7Q9UKP4 1686 aa27.91■■■□□ 2.06
MRPL39-201ENST00000307301 PNPLA7Q6ZV29 1317 aa27.9■■■□□ 2.06
MRPL39-201ENST00000307301 LOC102724428A0A0B4J2F2 783 aa27.89■■■□□ 2.06
MRPL39-201ENST00000307301 SIK1P57059 783 aa27.89■■■□□ 2.06
MRPL39-201ENST00000307301 RSPH6AQ9H0K4 717 aa27.88■■■□□ 2.05
MRPL39-201ENST00000307301 LGR6Q9HBX8 967 aa27.88■■■□□ 2.05
MRPL39-201ENST00000307301 ATF5Q9Y2D1 282 aaPredicted RBP27.88■■■□□ 2.05
MRPL39-201ENST00000307301 U2AF1L5P0DN76 240 aaPredicted RBP27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms