RNA–Protein interactions for RNA: ENST00000307216.10

TMEM87A-201, Transcript of transmembrane protein 87A, humanhuman

TSL 1 (best) BASIC

Gene TMEM87A, Length 1,598 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM87A-201ENST00000307216 BECN1Q14457 450 aa17.94■□□□□ 0.46
TMEM87A-201ENST00000307216 PHRF1Q9P1Y6 1649 aaKnown RBP17.94■□□□□ 0.46
TMEM87A-201ENST00000307216 ADGRL3Q9HAR2 1447 aa17.93■□□□□ 0.46
TMEM87A-201ENST00000307216 ZBTB7BO15156 539 aaPredicted RBP17.93■□□□□ 0.46
TMEM87A-201ENST00000307216 EIF5BO60841 1220 aaKnown RBP17.93■□□□□ 0.46
TMEM87A-201ENST00000307216 AEBP1Q8IUX7 1158 aa17.93■□□□□ 0.46
TMEM87A-201ENST00000307216 TSPYL6Q8N831 410 aa17.93■□□□□ 0.46
TMEM87A-201ENST00000307216 RTF1Q92541 710 aaKnown RBP17.93■□□□□ 0.46
TMEM87A-201ENST00000307216 C8orf58Q8NAV2 365 aa17.92■□□□□ 0.46
TMEM87A-201ENST00000307216 CACNA1FO60840 1977 aa17.92■□□□□ 0.46
TMEM87A-201ENST00000307216 CRB1P82279 1406 aa17.92■□□□□ 0.46
TMEM87A-201ENST00000307216 NLRP6P59044 892 aa17.91■□□□□ 0.46
TMEM87A-201ENST00000307216 NUCB1Q02818 461 aa17.91■□□□□ 0.46
TMEM87A-201ENST00000307216 BABAM1Q9NWV8 329 aa17.91■□□□□ 0.46
TMEM87A-201ENST00000307216 FAM83GA6ND36 823 aa17.91■□□□□ 0.46
TMEM87A-201ENST00000307216 LTN1O94822 1766 aa17.9■□□□□ 0.46
TMEM87A-201ENST00000307216 NWD1Q149M9 1564 aa17.9■□□□□ 0.46
TMEM87A-201ENST00000307216 PHF8Q9UPP1 1060 aa17.9■□□□□ 0.46
TMEM87A-201ENST00000307216 INTS3Q68E01 1043 aaKnown RBP17.89■□□□□ 0.45
TMEM87A-201ENST00000307216 USP19O94966 1318 aa17.89■□□□□ 0.45
TMEM87A-201ENST00000307216 NBR1Q14596 966 aa17.88■□□□□ 0.45
TMEM87A-201ENST00000307216 NPHP4O75161 1426 aaPredicted RBP17.88■□□□□ 0.45
TMEM87A-201ENST00000307216 HOXC9P31274 260 aa17.87■□□□□ 0.45
TMEM87A-201ENST00000307216 CHD1LQ86WJ1 897 aa17.87■□□□□ 0.45
TMEM87A-201ENST00000307216 ABTB2Q8N961 1025 aa17.87■□□□□ 0.45
TMEM87A-201ENST00000307216 TBC1D32Q96NH3 1257 aa17.87■□□□□ 0.45
TMEM87A-201ENST00000307216 DCTN1Q14203 1278 aa17.87■□□□□ 0.45
TMEM87A-201ENST00000307216 EYA1Q99502 592 aa17.87■□□□□ 0.45
TMEM87A-201ENST00000307216 ELL2O00472 640 aaPredicted RBP17.86■□□□□ 0.45
TMEM87A-201ENST00000307216 KCNH5Q8NCM2 988 aa17.86■□□□□ 0.45
TMEM87A-201ENST00000307216 KIF1AQ12756 1690 aa17.86■□□□□ 0.45
TMEM87A-201ENST00000307216 MTHFSDQ2M296 383 aaKnown RBP17.85■□□□□ 0.45
TMEM87A-201ENST00000307216 MCM10Q7L590 875 aa17.85■□□□□ 0.45
TMEM87A-201ENST00000307216 CHMP4AQ9BY43 222 aa17.85■□□□□ 0.45
TMEM87A-201ENST00000307216 NFAT5O94916 1531 aa17.85■□□□□ 0.45
TMEM87A-201ENST00000307216 N4BP2Q86UW6 1770 aaPredicted RBP17.84■□□□□ 0.45
TMEM87A-201ENST00000307216 SOX12O15370 315 aa17.83■□□□□ 0.45
TMEM87A-201ENST00000307216 BMP2KLQ5H9B9 411 aa17.83■□□□□ 0.45
TMEM87A-201ENST00000307216 RPAP2Q8IXW5 612 aaPredicted RBP17.83■□□□□ 0.45
TMEM87A-201ENST00000307216 TSPYL4Q9UJ04 414 aa17.83■□□□□ 0.45
TMEM87A-201ENST00000307216 MAP3K5Q99683 1374 aa17.83■□□□□ 0.44
TMEM87A-201ENST00000307216 FAM208AQ9UK61 1670 aaKnown RBP17.83■□□□□ 0.44
TMEM87A-201ENST00000307216 GNAT3A8MTJ3 354 aa17.83■□□□□ 0.44
TMEM87A-201ENST00000307216 RGS12O14924 1447 aa17.82■□□□□ 0.44
TMEM87A-201ENST00000307216 SEC24BO95487 1268 aa17.81■□□□□ 0.44
TMEM87A-201ENST00000307216 IP6K1Q92551 441 aa17.81■□□□□ 0.44
TMEM87A-201ENST00000307216 CCT4P50991 539 aaKnown RBP17.8■□□□□ 0.44
TMEM87A-201ENST00000307216 SLIT3O75094 1523 aa17.79■□□□□ 0.44
TMEM87A-201ENST00000307216 STK31Q9BXU1 1019 aa17.79■□□□□ 0.44
TMEM87A-201ENST00000307216 PSME1Q06323 249 aa17.79■□□□□ 0.44
TMEM87A-201ENST00000307216 ANKRD45Q5TZF3 282 aa17.79■□□□□ 0.44
TMEM87A-201ENST00000307216 ANKRD44Q8N8A2 993 aa17.79■□□□□ 0.44
TMEM87A-201ENST00000307216 LNPKQ9C0E8 428 aa17.79■□□□□ 0.44
TMEM87A-201ENST00000307216 PXDNLA1KZ92 1463 aa17.78■□□□□ 0.44
TMEM87A-201ENST00000307216 LMO7Q8WWI1 1683 aa17.78■□□□□ 0.44
TMEM87A-201ENST00000307216 CCDC30Q5VVM6 783 aa17.78■□□□□ 0.44
TMEM87A-201ENST00000307216 DCTPP1Q9H773 170 aa17.78■□□□□ 0.44
TMEM87A-201ENST00000307216 HMMRO75330 724 aa17.77■□□□□ 0.44
TMEM87A-201ENST00000307216 C22orf23Q9BZE7 217 aa17.77■□□□□ 0.44
TMEM87A-201ENST00000307216 MST1RQ04912 1400 aa17.77■□□□□ 0.43
TMEM87A-201ENST00000307216 SLC4A2P04920 1241 aa17.76■□□□□ 0.43
TMEM87A-201ENST00000307216 DEKP35659 375 aaKnown RBP17.76■□□□□ 0.43
TMEM87A-201ENST00000307216 OVOS2A0A0G2JMS6 1433 aa17.76■□□□□ 0.43
TMEM87A-201ENST00000307216 ATP10DQ9P241 1426 aa17.76■□□□□ 0.43
TMEM87A-201ENST00000307216 MED1Q15648 1581 aaPredicted RBP17.76■□□□□ 0.43
TMEM87A-201ENST00000307216 TRPM3Q9HCF6 1732 aaPredicted RBP17.76■□□□□ 0.43
TMEM87A-201ENST00000307216 NCAPD2Q15021 1401 aa17.75■□□□□ 0.43
TMEM87A-201ENST00000307216 TAF7Q15545 349 aaPredicted RBP17.75■□□□□ 0.43
TMEM87A-201ENST00000307216 ESCO1Q5FWF5 840 aa17.75■□□□□ 0.43
TMEM87A-201ENST00000307216 C14orf37Q86TY3 774 aa17.75■□□□□ 0.43
TMEM87A-201ENST00000307216 LMTK3Q96Q04 1460 aa17.75■□□□□ 0.43
TMEM87A-201ENST00000307216 CAMTA1Q9Y6Y1 1673 aa17.75■□□□□ 0.43
TMEM87A-201ENST00000307216 MSH6P52701 1360 aa17.75■□□□□ 0.43
TMEM87A-201ENST00000307216 FOXO3O43524 673 aa17.74■□□□□ 0.43
TMEM87A-201ENST00000307216 SIRT2Q8IXJ6 389 aa17.74■□□□□ 0.43
TMEM87A-201ENST00000307216 NCOA3Q9Y6Q9 1424 aa17.74■□□□□ 0.43
TMEM87A-201ENST00000307216 HOXB7P09629 217 aa17.74■□□□□ 0.43
TMEM87A-201ENST00000307216 RBM25P49756 843 aaKnown RBP17.74■□□□□ 0.43
TMEM87A-201ENST00000307216 KDM3BQ7LBC6 1761 aa17.74■□□□□ 0.43
TMEM87A-201ENST00000307216 CEMIPQ8WUJ3 1361 aa17.73■□□□□ 0.43
TMEM87A-201ENST00000307216 NFKBIBQ15653 356 aa17.73■□□□□ 0.43
TMEM87A-201ENST00000307216 C1orf115Q9H7X2 142 aa17.73■□□□□ 0.43
TMEM87A-201ENST00000307216 SLC4A3P48751 1232 aa17.72■□□□□ 0.43
TMEM87A-201ENST00000307216 MFAP1P55081 439 aaKnown RBP17.72■□□□□ 0.43
TMEM87A-201ENST00000307216 KRT24Q2M2I5 525 aa17.72■□□□□ 0.43
TMEM87A-201ENST00000307216 NUTM2GQ5VZR2 741 aa17.72■□□□□ 0.43
TMEM87A-201ENST00000307216 AMOTQ4VCS5 1084 aa17.71■□□□□ 0.43
TMEM87A-201ENST00000307216 CEP85Q6P2H3 762 aa17.71■□□□□ 0.43
TMEM87A-201ENST00000307216 DCCP43146 1447 aa17.71■□□□□ 0.43
TMEM87A-201ENST00000307216 GNAI3P08754 354 aa17.7■□□□□ 0.42
TMEM87A-201ENST00000307216 PLEKHG2Q9H7P9 1386 aa17.7■□□□□ 0.42
TMEM87A-201ENST00000307216 CDC45O75419 566 aa17.7■□□□□ 0.42
TMEM87A-201ENST00000307216 PLEKHO1Q53GL0 409 aaPredicted RBP17.69■□□□□ 0.42
TMEM87A-201ENST00000307216 IL17REQ8NFR9 667 aa17.69■□□□□ 0.42
TMEM87A-201ENST00000307216 AKAP4Q5JQC9 854 aa17.68■□□□□ 0.42
TMEM87A-201ENST00000307216 LTV1Q96GA3 475 aaPredicted RBP17.68■□□□□ 0.42
TMEM87A-201ENST00000307216 TBC1D2Q9BYX2 928 aa17.68■□□□□ 0.42
TMEM87A-201ENST00000307216 ALS2Q96Q42 1657 aa17.68■□□□□ 0.42
TMEM87A-201ENST00000307216 ABCC6O95255 1503 aa17.68■□□□□ 0.42
TMEM87A-201ENST00000307216 RGPD2P0DJD1 1756 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms