RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 PSMA5P28066 241 aa9.98□□□□□ -0.81
PCDHB1-201ENST00000306549 LAMC1P11047 1609 aa9.98□□□□□ -0.81
PCDHB1-201ENST00000306549 ZFYVE27Q5T4F4 411 aa9.98□□□□□ -0.81
PCDHB1-201ENST00000306549 RUFY1Q96T51 708 aa9.98□□□□□ -0.81
PCDHB1-201ENST00000306549 INTS3Q68E01 1043 aaKnown RBP9.98□□□□□ -0.81
PCDHB1-201ENST00000306549 LARP1Q6PKG0 1096 aaKnown RBP9.98□□□□□ -0.81
PCDHB1-201ENST00000306549 KCNA6P17658 529 aa9.98□□□□□ -0.81
PCDHB1-201ENST00000306549 CEBPAP49715 358 aaPredicted RBP9.98□□□□□ -0.81
PCDHB1-201ENST00000306549 TTC37Q6PGP7 1564 aa9.98□□□□□ -0.81
PCDHB1-201ENST00000306549 DDX11L8A8MPP1 907 aa9.98□□□□□ -0.81
PCDHB1-201ENST00000306549 PATL2C9JE40 543 aaKnown RBP9.98□□□□□ -0.81
PCDHB1-201ENST00000306549 ZRSR2Q15696 482 aaKnown RBP9.98□□□□□ -0.81
PCDHB1-201ENST00000306549 RRP1P56182 461 aaKnown RBP9.98□□□□□ -0.81
PCDHB1-201ENST00000306549 TAF7Q15545 349 aaPredicted RBP9.98□□□□□ -0.81
PCDHB1-201ENST00000306549 IGHMBP2P38935 993 aaKnown RBP9.98□□□□□ -0.81
PCDHB1-201ENST00000306549 IKQ13123 557 aaPredicted RBP9.98□□□□□ -0.81
PCDHB1-201ENST00000306549 SAMD1Q6SPF0 538 aaPredicted RBP9.98□□□□□ -0.81
PCDHB1-201ENST00000306549 CLUAP1Q96AJ1 413 aa9.98□□□□□ -0.81
PCDHB1-201ENST00000306549 AK7Q96M32 723 aa9.98□□□□□ -0.81
PCDHB1-201ENST00000306549 NACAP1Q9BZK3 213 aa9.98□□□□□ -0.81
PCDHB1-201ENST00000306549 SLKQ9H2G2 1235 aaPredicted RBP9.98□□□□□ -0.81
PCDHB1-201ENST00000306549 CNNM1Q9NRU3 951 aa9.97□□□□□ -0.81
PCDHB1-201ENST00000306549 TMOD2Q9NZR1 351 aa9.97□□□□□ -0.81
PCDHB1-201ENST00000306549 TWISTNBQ3B726 338 aaPredicted RBP9.97□□□□□ -0.81
PCDHB1-201ENST00000306549 HSP90AB2PQ58FF8 381 aa9.97□□□□□ -0.81
PCDHB1-201ENST00000306549 IFT57Q9NWB7 429 aa9.97□□□□□ -0.81
PCDHB1-201ENST00000306549 AKAP2Q9Y2D5 859 aa9.97□□□□□ -0.81
PCDHB1-201ENST00000306549 OFD1O75665 1012 aa9.97□□□□□ -0.81
PCDHB1-201ENST00000306549 IFNL2Q8IZJ0 200 aa9.97□□□□□ -0.81
PCDHB1-201ENST00000306549 NBPF8Q3BBV2 869 aa9.96□□□□□ -0.81
PCDHB1-201ENST00000306549 NBPF14Q5TI25 921 aa9.96□□□□□ -0.81
PCDHB1-201ENST00000306549 PRAG1Q86YV5 1406 aa9.96□□□□□ -0.81
PCDHB1-201ENST00000306549 WAPLQ7Z5K2 1190 aa9.96□□□□□ -0.82
PCDHB1-201ENST00000306549 ACBD3Q9H3P7 528 aa9.96□□□□□ -0.82
PCDHB1-201ENST00000306549 ELL2O00472 640 aaPredicted RBP9.96□□□□□ -0.82
PCDHB1-201ENST00000306549 GCC1Q96CN9 775 aa9.96□□□□□ -0.82
PCDHB1-201ENST00000306549 NAP1L1P55209 391 aaKnown RBP9.96□□□□□ -0.82
PCDHB1-201ENST00000306549 ZC3H6P61129 1189 aaKnown RBP9.96□□□□□ -0.82
PCDHB1-201ENST00000306549 MCM2P49736 904 aa9.95□□□□□ -0.82
PCDHB1-201ENST00000306549 PIK3R4Q99570 1358 aa9.95□□□□□ -0.82
PCDHB1-201ENST00000306549 AIMP1Q12904 312 aaKnown RBP9.95□□□□□ -0.82
PCDHB1-201ENST00000306549 FMNL2Q96PY5 1086 aa9.95□□□□□ -0.82
PCDHB1-201ENST00000306549 WASHC4Q2M389 1173 aa9.95□□□□□ -0.82
PCDHB1-201ENST00000306549 RIMBP3CA6NJZ7 1639 aa9.95□□□□□ -0.82
PCDHB1-201ENST00000306549 RIMBP3BA6NNM3 1639 aa9.95□□□□□ -0.82
PCDHB1-201ENST00000306549 RIMBP3Q9UFD9 1639 aa9.95□□□□□ -0.82
PCDHB1-201ENST00000306549 UGGT1Q9NYU2 1555 aa9.95□□□□□ -0.82
PCDHB1-201ENST00000306549 DCTN1Q14203 1278 aa9.95□□□□□ -0.82
PCDHB1-201ENST00000306549 IQGAP3Q86VI3 1631 aa9.94□□□□□ -0.82
PCDHB1-201ENST00000306549 YTHDC2Q9H6S0 1430 aaKnown RBP9.94□□□□□ -0.82
PCDHB1-201ENST00000306549 CLASP1Q7Z460 1538 aa9.94□□□□□ -0.82
PCDHB1-201ENST00000306549 SIRT1Q96EB6 747 aa9.94□□□□□ -0.82
PCDHB1-201ENST00000306549 SKOR2Q2VWA4 1001 aaPredicted RBP9.94□□□□□ -0.82
PCDHB1-201ENST00000306549 TEX35Q5T0J7 233 aa9.94□□□□□ -0.82
PCDHB1-201ENST00000306549 YEATS2Q9ULM3 1422 aa9.94□□□□□ -0.82
PCDHB1-201ENST00000306549 ADAMTS2O95450 1211 aa9.94□□□□□ -0.82
PCDHB1-201ENST00000306549 ALDH1L2Q3SY69 923 aa9.94□□□□□ -0.82
PCDHB1-201ENST00000306549 TRIM21P19474 475 aaKnown RBP9.93□□□□□ -0.82
PCDHB1-201ENST00000306549 PPP4R3BQ5MIZ7 849 aa9.93□□□□□ -0.82
PCDHB1-201ENST00000306549 PPP1R1BQ9UD71 204 aaPredicted RBP9.93□□□□□ -0.82
PCDHB1-201ENST00000306549 ADGRF5Q8IZF2 1346 aa9.93□□□□□ -0.82
PCDHB1-201ENST00000306549 PDCP20941 246 aa9.93□□□□□ -0.82
PCDHB1-201ENST00000306549 SYCP1Q15431 976 aa9.93□□□□□ -0.82
PCDHB1-201ENST00000306549 PTPRCP08575 1304 aa9.93□□□□□ -0.82
PCDHB1-201ENST00000306549 IL16Q14005 1332 aa9.93□□□□□ -0.82
PCDHB1-201ENST00000306549 ACEP12821 1306 aa9.93□□□□□ -0.82
PCDHB1-201ENST00000306549 SYNMO15061 1565 aa9.93□□□□□ -0.82
PCDHB1-201ENST00000306549 PPP1R42Q7Z4L9 355 aa9.93□□□□□ -0.82
PCDHB1-201ENST00000306549 DNAJC5Q9H3Z4 198 aa9.92□□□□□ -0.82
PCDHB1-201ENST00000306549 DBF4Q9UBU7 674 aaPredicted RBP9.92□□□□□ -0.82
PCDHB1-201ENST00000306549 FLT4P35916 1363 aa9.92□□□□□ -0.82
PCDHB1-201ENST00000306549 DESP17661 470 aa9.92□□□□□ -0.82
PCDHB1-201ENST00000306549 ANKRD18AQ8IVF6 992 aa9.92□□□□□ -0.82
PCDHB1-201ENST00000306549 NEUROD6Q96NK8 337 aa9.92□□□□□ -0.82
PCDHB1-201ENST00000306549 NPATQ14207 1427 aa9.92□□□□□ -0.82
PCDHB1-201ENST00000306549 FER1L4A9Z1Z3 1794 aa9.92□□□□□ -0.82
PCDHB1-201ENST00000306549 CCDC27Q2M243 656 aa9.92□□□□□ -0.82
PCDHB1-201ENST00000306549 CEP126Q9P2H0 1117 aa9.92□□□□□ -0.82
PCDHB1-201ENST00000306549 ST5P78524 1137 aa9.92□□□□□ -0.82
PCDHB1-201ENST00000306549 ANO2Q9NQ90 1003 aa9.92□□□□□ -0.82
PCDHB1-201ENST00000306549 CDC5LQ99459 802 aaKnown RBP9.92□□□□□ -0.82
PCDHB1-201ENST00000306549 DNAI2Q9GZS0 605 aa9.92□□□□□ -0.82
PCDHB1-201ENST00000306549 RAB11FIP3O75154 756 aa9.92□□□□□ -0.82
PCDHB1-201ENST00000306549 RPGRQ92834 1020 aaKnown RBP9.92□□□□□ -0.82
PCDHB1-201ENST00000306549 CAVIN4Q5BKX8 364 aa9.91□□□□□ -0.82
PCDHB1-201ENST00000306549 ARID3AQ99856 593 aa9.91□□□□□ -0.82
PCDHB1-201ENST00000306549 NYXQ9GZU5 481 aa9.91□□□□□ -0.82
PCDHB1-201ENST00000306549 TMEM2Q9UHN6 1383 aa9.91□□□□□ -0.82
PCDHB1-201ENST00000306549 ATF7IPQ6VMQ6 1270 aa9.91□□□□□ -0.82
PCDHB1-201ENST00000306549 ANKRD1Q15327 319 aa9.91□□□□□ -0.82
PCDHB1-201ENST00000306549 FAM161AQ3B820 660 aa9.91□□□□□ -0.82
PCDHB1-201ENST00000306549 CTNNA3Q9UI47 895 aa9.91□□□□□ -0.82
PCDHB1-201ENST00000306549 CEP152O94986 1710 aa9.91□□□□□ -0.82
PCDHB1-201ENST00000306549 HOMER1Q86YM7 354 aa9.91□□□□□ -0.82
PCDHB1-201ENST00000306549 ADAMTS8Q9UP79 889 aa9.91□□□□□ -0.82
PCDHB1-201ENST00000306549 EDC4Q6P2E9 1401 aaKnown RBP9.91□□□□□ -0.82
PCDHB1-201ENST00000306549 TMPOP42166 694 aaKnown RBP9.9□□□□□ -0.82
PCDHB1-201ENST00000306549 SLC4A2P04920 1241 aa9.9□□□□□ -0.82
PCDHB1-201ENST00000306549 DDB1Q16531 1140 aa9.9□□□□□ -0.82
PCDHB1-201ENST00000306549 CCDC191Q8NCU4 936 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 163.9 ms