RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 NSFL1CQ9UNZ2 370 aaKnown RBP6.86□□□□□ -1.31
VPS50-202ENST00000305866 ESPNB1AK53 854 aa6.86□□□□□ -1.31
VPS50-202ENST00000305866 ZNF500O60304 480 aaPredicted RBP6.86□□□□□ -1.31
VPS50-202ENST00000305866 SLIT3O75094 1523 aa6.86□□□□□ -1.31
VPS50-202ENST00000305866 ADAMTSL3P82987 1691 aa6.86□□□□□ -1.31
VPS50-202ENST00000305866 TNRQ92752 1358 aa6.86□□□□□ -1.31
VPS50-202ENST00000305866 GGT6Q6P531 493 aa6.86□□□□□ -1.31
VPS50-202ENST00000305866 CABP2Q9NPB3 220 aa6.86□□□□□ -1.31
VPS50-202ENST00000305866 DDX19BQ9UMR2 479 aa6.86□□□□□ -1.31
VPS50-202ENST00000305866 GOLGA6L3A6NEY3 463 aa6.85□□□□□ -1.31
VPS50-202ENST00000305866 RRP9O43818 475 aaKnown RBP6.85□□□□□ -1.31
VPS50-202ENST00000305866 HSP90AB1P08238 724 aaKnown RBP6.85□□□□□ -1.31
VPS50-202ENST00000305866 USP26Q9BXU7 913 aa6.85□□□□□ -1.31
VPS50-202ENST00000305866 C5P01031 1676 aa6.85□□□□□ -1.31
VPS50-202ENST00000305866 CALD1Q05682 793 aaKnown RBP6.85□□□□□ -1.31
VPS50-202ENST00000305866 BECN1Q14457 450 aa6.85□□□□□ -1.31
VPS50-202ENST00000305866 NFE2L2Q16236 605 aa6.85□□□□□ -1.31
VPS50-202ENST00000305866 RPAP1Q9BWH6 1393 aaPredicted RBP6.85□□□□□ -1.31
VPS50-202ENST00000305866 ROBO2Q9HCK4 1378 aa6.85□□□□□ -1.31
VPS50-202ENST00000305866 OFD1O75665 1012 aa6.84□□□□□ -1.31
VPS50-202ENST00000305866 KLHL40Q2TBA0 621 aa6.84□□□□□ -1.31
VPS50-202ENST00000305866 PLPPR3Q6T4P5 718 aa6.84□□□□□ -1.31
VPS50-202ENST00000305866 DIAPH1O60610 1272 aaKnown RBP6.84□□□□□ -1.31
VPS50-202ENST00000305866 SSFA2P28290 1259 aa6.84□□□□□ -1.31
VPS50-202ENST00000305866 HDGFL2Q7Z4V5 671 aaPredicted RBP6.84□□□□□ -1.31
VPS50-202ENST00000305866 MRC1P22897 1456 aa6.84□□□□□ -1.31
VPS50-202ENST00000305866 ALS2Q96Q42 1657 aa6.84□□□□□ -1.31
VPS50-202ENST00000305866 PLEKHG5O94827 1062 aa6.83□□□□□ -1.32
VPS50-202ENST00000305866 BAG4O95429 457 aaKnown RBP6.83□□□□□ -1.32
VPS50-202ENST00000305866 CHMP4BQ9H444 224 aaKnown RBP6.83□□□□□ -1.32
VPS50-202ENST00000305866 DCTPP1Q9H773 170 aa6.83□□□□□ -1.32
VPS50-202ENST00000305866 BABAM1Q9NWV8 329 aa6.83□□□□□ -1.32
VPS50-202ENST00000305866 TTC21AQ8NDW8 1320 aa6.83□□□□□ -1.32
VPS50-202ENST00000305866 HS1BP3Q53T59 392 aa6.83□□□□□ -1.32
VPS50-202ENST00000305866 INTS3Q68E01 1043 aaKnown RBP6.83□□□□□ -1.32
VPS50-202ENST00000305866 RBSNQ9H1K0 784 aa6.83□□□□□ -1.32
VPS50-202ENST00000305866 OSBPL3Q9H4L5 887 aa6.83□□□□□ -1.32
VPS50-202ENST00000305866 PRR36Q9H6K5 1346 aa6.83□□□□□ -1.32
VPS50-202ENST00000305866 ADGRL3Q9HAR2 1447 aa6.83□□□□□ -1.32
VPS50-202ENST00000305866 DDX11L8A8MPP1 907 aa6.83□□□□□ -1.32
VPS50-202ENST00000305866 PARP4Q9UKK3 1724 aaKnown RBP6.83□□□□□ -1.32
VPS50-202ENST00000305866 K7ELQ4 463 aaPredicted RBP6.82□□□□□ -1.32
VPS50-202ENST00000305866 FBXO31Q5XUX0 539 aaPredicted RBP6.82□□□□□ -1.32
VPS50-202ENST00000305866 CFAP44Q96MT7 982 aa6.82□□□□□ -1.32
VPS50-202ENST00000305866 NOL7Q9UMY1 257 aaKnown RBP6.82□□□□□ -1.32
VPS50-202ENST00000305866 TTC21BQ7Z4L5 1316 aa6.82□□□□□ -1.32
VPS50-202ENST00000305866 GCC1Q96CN9 775 aa6.82□□□□□ -1.32
VPS50-202ENST00000305866 COL22A1Q8NFW1 1626 aaPredicted RBP6.82□□□□□ -1.32
VPS50-202ENST00000305866 KIF1AQ12756 1690 aa6.82□□□□□ -1.32
VPS50-202ENST00000305866 HTATSF1O43719 755 aaKnown RBP6.82□□□□□ -1.32
VPS50-202ENST00000305866 MFAP1P55081 439 aaKnown RBP6.82□□□□□ -1.32
VPS50-202ENST00000305866 CUL4AQ13619 759 aa6.82□□□□□ -1.32
VPS50-202ENST00000305866 OTUD7AQ8TE49 926 aaPredicted RBP6.82□□□□□ -1.32
VPS50-202ENST00000305866 IL25Q9H293 177 aa6.82□□□□□ -1.32
VPS50-202ENST00000305866 MBIPQ9NS73 344 aa6.82□□□□□ -1.32
VPS50-202ENST00000305866 NWD2Q9ULI1 1742 aa6.82□□□□□ -1.32
VPS50-202ENST00000305866 IPO8O15397 1037 aaKnown RBP6.81□□□□□ -1.32
VPS50-202ENST00000305866 CHAMP1Q96JM3 812 aa6.81□□□□□ -1.32
VPS50-202ENST00000305866 FUCA2Q9BTY2 467 aa6.81□□□□□ -1.32
VPS50-202ENST00000305866 ZMYND15Q9H091 742 aa6.81□□□□□ -1.32
VPS50-202ENST00000305866 EIF5BO60841 1220 aaKnown RBP6.81□□□□□ -1.32
VPS50-202ENST00000305866 LMOD3Q0VAK6 560 aa6.81□□□□□ -1.32
VPS50-202ENST00000305866 TTC22Q5TAA0 569 aa6.81□□□□□ -1.32
VPS50-202ENST00000305866 ZNF710Q8N1W2 664 aa6.81□□□□□ -1.32
VPS50-202ENST00000305866 C8orf58Q8NAV2 365 aa6.81□□□□□ -1.32
VPS50-202ENST00000305866 CHL1O00533 1208 aa6.81□□□□□ -1.32
VPS50-202ENST00000305866 CABP1Q9NZU7 370 aa6.81□□□□□ -1.32
VPS50-202ENST00000305866 TMEM63CQ9P1W3 806 aa6.81□□□□□ -1.32
VPS50-202ENST00000305866 TJP1Q07157 1748 aa6.8□□□□□ -1.32
VPS50-202ENST00000305866 SBNO1A3KN83 1393 aa6.8□□□□□ -1.32
VPS50-202ENST00000305866 EPB41L2O43491 1005 aaKnown RBP6.8□□□□□ -1.32
VPS50-202ENST00000305866 ZSCAN23Q3MJ62 389 aa6.8□□□□□ -1.32
VPS50-202ENST00000305866 KLHL34Q8N239 644 aa6.8□□□□□ -1.32
VPS50-202ENST00000305866 CCDC61Q9Y6R9 512 aa6.8□□□□□ -1.32
VPS50-202ENST00000305866 NUP188Q5SRE5 1749 aa6.8□□□□□ -1.32
VPS50-202ENST00000305866 MSH6P52701 1360 aa6.8□□□□□ -1.32
VPS50-202ENST00000305866 FBLN1P23142 703 aa6.8□□□□□ -1.32
VPS50-202ENST00000305866 GTF2F1P35269 517 aaKnown RBP eCLIP6.8□□□□□ -1.32
VPS50-202ENST00000305866 HDGFP51858 240 aaKnown RBP6.8□□□□□ -1.32
VPS50-202ENST00000305866 GNAI1P63096 354 aa6.8□□□□□ -1.32
VPS50-202ENST00000305866 C16orf71Q8IYS4 520 aaPredicted RBP6.8□□□□□ -1.32
VPS50-202ENST00000305866 TBX22Q9Y458 520 aa6.8□□□□□ -1.32
VPS50-202ENST00000305866 PTPRCP08575 1304 aa6.8□□□□□ -1.32
VPS50-202ENST00000305866 U2AF1L5P0DN76 240 aaPredicted RBP6.8□□□□□ -1.32
VPS50-202ENST00000305866 U2AF1Q01081 240 aaKnown RBP eCLIP6.8□□□□□ -1.32
VPS50-202ENST00000305866 SPRYD3Q8NCJ5 442 aa6.79□□□□□ -1.32
VPS50-202ENST00000305866 LNPKQ9C0E8 428 aa6.79□□□□□ -1.32
VPS50-202ENST00000305866 IGSF1Q8N6C5 1336 aa6.79□□□□□ -1.32
VPS50-202ENST00000305866 LAMB4A4D0S4 1761 aa6.79□□□□□ -1.32
VPS50-202ENST00000305866 COL18A1P39060 1754 aa6.79□□□□□ -1.32
VPS50-202ENST00000305866 AP5Z1O43299 807 aa6.79□□□□□ -1.32
VPS50-202ENST00000305866 CCDC173Q0VFZ6 552 aa6.79□□□□□ -1.32
VPS50-202ENST00000305866 ZGPATQ8N5A5 531 aaKnown RBP6.79□□□□□ -1.32
VPS50-202ENST00000305866 GGNBP2Q9H3C7 697 aa6.79□□□□□ -1.32
VPS50-202ENST00000305866 SMC4Q9NTJ3 1288 aa6.79□□□□□ -1.32
VPS50-202ENST00000305866 PKD1L3Q7Z443 1732 aa6.79□□□□□ -1.32
VPS50-202ENST00000305866 CEP85Q6P2H3 762 aa6.78□□□□□ -1.32
VPS50-202ENST00000305866 ANKRD44Q8N8A2 993 aa6.78□□□□□ -1.32
VPS50-202ENST00000305866 NUDT16Q96DE0 195 aaKnown RBP6.78□□□□□ -1.32
VPS50-202ENST00000305866 GZF1Q9H116 711 aaPredicted RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms